ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 648 0.0
2emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transp... 587 e-164
3ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative... 504 e-139
4gb|AY108441.1| Zea mays PCO083558 mRNA sequence 361 2e-96
5gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence 234 3e-58
6gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
7gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare st... 178 2e-41
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
10dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma... 176 7e-41
11dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gam... 172 1e-39
12ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP ... 141 4e-30
13gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 141 4e-30
14gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 141 4e-30
15gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 141 4e-30
16gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 141 4e-30
17gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 141 4e-30
18emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Co... 141 4e-30
19gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete s... 141 4e-30
20dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mit... 133 9e-28
21gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno... 103 8e-19
22gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 ma... 103 8e-19
23gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chai... 103 8e-19
24emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
25emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, ... 82 3e-12
26gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, par... 78 5e-11
27emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in... 46 0.17
28emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in... 44 0.65
29emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in li... 44 0.65
30gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete se... 42 2.6
31gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete se... 42 2.6
32emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 i... 42 2.6
33gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, comple... 42 2.6
34emb|BX088705.18| Zebrafish DNA sequence from clone DKEY-21G19, c... 42 2.6
35gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, comp... 42 2.6
36gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, re... 42 2.6
37gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 ... 42 2.6
38gb|BC097063.1| Danio rerio Sec23 homolog A (S. cerevisiae), mRNA... 42 2.6 
>dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E20, full
            insert sequence
          Length = 1413

 Score =  648 bits (327), Expect = 0.0
 Identities = 506/564 (89%), Gaps = 4/564 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
            ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 1049 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 990

                                                                        
Query: 242  tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 301
            ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 989  tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 930

                                                                        
Query: 302  catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 361
            | |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 929  cgtttctgctggagctgtccatggcagacatacgtgctccaagctcactgcatgcattct 870

                                                                        
Query: 362  ctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggattt 421
            ||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 869  ctagagcagcattatacataacacaagaaaactggaactcggtaagattctgaagaattt 810

                                                                        
Query: 422  ctgattttgtttcacctccttcaatttcatacgaatccagctcaccaaccttcccaccag 481
            ||||||| ||||||||||||||||||||||| |||||||| |||||||||||   |||||
Sbjct: 809  ctgatttagtttcacctccttcaatttcatatgaatccaggtcaccaacctt---accag 753

                                                                        
Query: 482  attccgattctttctccataacctctggggacagtattgtggccaatgtaggcctaaatg 541
            ||||||||||||||||||||||||||||||| ||||| || | || ||| ||| | ||||
Sbjct: 752  attccgattctttctccataacctctggggaaagtatggttgtcattgtgggcttgaatg 693

                                                                        
Query: 542  aaatgacagactgaaacttgttaaaaacaactcttatagcatcatattcaacatttttca 601
            | ||||| || || ||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 692  atatgaccgagtggaacttgttaaaaacaacccttagagcatcatactcaacatttttca 633

                                                                        
Query: 602  agatatcatctgcgagcacagcaacctgtgtgtagttaatagggttcttctgcaactcag 661
            ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 632  agatatcatctgccagcacagcaatctgtgtgtagttgatagggttcttctgcaactcag 573

                                                                        
Query: 662  atactgtcatttcaatatgcttcctggagtcacgggatgagttgaactttccccttttct 721
            |||||||||| || || |  | | ||||||||| | |||||||||||||| |||||||||
Sbjct: 572  atactgtcatctcgatgttatccttggagtcac-gaatgagttgaactttacccttttct 514

                                    
Query: 722  nctaatatgacatacttgctttct 745
             |||||||||||||||||||||||
Sbjct: 513  cctaatatgacatacttgctttct 490
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>emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transporting ATP synthase (xd1
           gene)
          Length = 599

 Score =  587 bits (296), Expect = e-164
 Identities = 442/490 (90%), Gaps = 3/490 (0%)
 Strand = Plus / Minus

                                                                       
Query: 182 agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
           ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 499 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 440

                                                                       
Query: 242 tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 301
           ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 439 tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 380

                                                                       
Query: 302 catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 361
           | |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 379 cgtttctgctggagctgtccatagcagacatacgtgctccaagctcactgcatgcattct 320

                                                                       
Query: 362 ctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggattt 421
           ||||| |||||||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 319 ctagagcagcattatacacaacacaagaaaactggaactcggtaagattctgaagaattt 260

                                                                       
Query: 422 ctgattttgtttcacctccttcaatttcatacgaatccagctcaccaaccttcccaccag 481
           ||||||| ||||||||||||||||||||||| |||||||| |||||||||||   |||||
Sbjct: 259 ctgatttagtttcacctccttcaatttcatatgaatccaggtcaccaacctt---accag 203

                                                                       
Query: 482 attccgattctttctccataacctctggggacagtattgtggccaatgtaggcctaaatg 541
           ||||||||||||||||||||||||||||||| ||||| || | || ||| ||| | ||||
Sbjct: 202 attccgattctttctccataacctctggggaaagtatggttgtcattgtgggcttgaatg 143

                                                                       
Query: 542 aaatgacagactgaaacttgttaaaaacaactcttatagcatcatattcaacatttttca 601
           | ||||| || || ||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 142 atatgaccgagtggaacttgttaaaaacaacccttagagcatcatactcaacatttttca 83

                                                                       
Query: 602 agatatcatctgcgagcacagcaacctgtgtgtagttaatagggttcttctgcaactcag 661
           ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||
Sbjct: 82  agatatcatctgccagcacagcaatctgtgtgtagttgatagggctcttctgcaactcag 23

                     
Query: 662 atactgtcat 671
           ||||||||||
Sbjct: 22  atactgtcat 13
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>ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative ATP synthase gamma
            chain, mitochondrial precursor (OSJNBa0053D03.10), mRNA
          Length = 1107

 Score =  504 bits (254), Expect = e-139
 Identities = 388/432 (89%), Gaps = 3/432 (0%)
 Strand = Plus / Minus

                                                                        
Query: 194  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 253
            |||||||||| ||||| || || || || |||||| ||||||| ||||||||||||||||
Sbjct: 1105 atccctcaagggcagaagcgccagagataatctcaatgagctctgtagtgatagatgctt 1046

                                                                        
Query: 254  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 313
            ||||||||||||||||||| || || || || |||||||||||||| || ||||||||||
Sbjct: 1045 gacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctgg 986

                                                                        
Query: 314  agctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcat 373
            |||||||||| ||||||||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 985  agctgtccatggcagacatacgtgctccaagctcactgcatgcattctctagagcagcat 926

                                                                        
Query: 374  tatacataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 433
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 925  tatacataacacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 866

                                                                        
Query: 434  cacctccttcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctt 493
            ||||||||||||||||||| |||||||| |||||||||||   |||||||||||||||||
Sbjct: 865  cacctccttcaatttcatatgaatccaggtcaccaacctt---accagattccgattctt 809

                                                                        
Query: 494  tctccataacctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagact 553
            ||||||||||||||||||| ||||| || | || ||| ||| | ||||| ||||| || |
Sbjct: 808  tctccataacctctggggaaagtatggttgtcattgtgggcttgaatgatatgaccgagt 749

                                                                        
Query: 554  gaaacttgttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctg 613
            | ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||
Sbjct: 748  ggaacttgttaaaaacaacccttagagcatcatactcaacatttttcaagatatcatctg 689

                        
Query: 614  cgagcacagcaa 625
            | ||||||||||
Sbjct: 688  ccagcacagcaa 677



 Score =  137 bits (69), Expect = 6e-29
 Identities = 108/120 (90%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 626 cctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttcaatatgcttcc 685
           ||||||||||||| |||||||||||||||||||||||||||||||| || || |  | | 
Sbjct: 580 cctgtgtgtagttgatagggttcttctgcaactcagatactgtcatctcgatgttatcct 521

                                                                       
Query: 686 tggagtcacgggatgagttgaactttccccttttctnctaatatgacatacttgctttct 745
           ||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 520 tggagtcac-gaatgagttgaactttacccttttctcctaatatgacatacttgctttct 462
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>gb|AY108441.1| Zea mays PCO083558 mRNA sequence
          Length = 1514

 Score =  361 bits (182), Expect = 2e-96
 Identities = 407/482 (84%)
 Strand = Plus / Minus

                                                                        
Query: 196  ccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttga 255
            |||||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||| 
Sbjct: 1065 ccctcaagggccgatgcaccagatataatctcagtaagctctgtggtgatggatgcttgg 1006

                                                                        
Query: 256  cgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggag 315
            |||||||||||||| || || || ||||| |||||||| || || ||||||||||| |||
Sbjct: 1005 cgtgtcctgttgtaagtgagagtgagacgatcaagcatatcgccagcatttctgctagag 946

                                                                        
Query: 316  ctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatta 375
            |||||||| |||||||||||||| |||||||||||||| |||||||||||  || |||| 
Sbjct: 945  ctgtccatggcagacatacgggctccaagctcactgcatgcattctctagggcaccattg 886

                                                                        
Query: 376  tacataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttca 435
            ||||| |||||||||||||||||||| |  ||||||||||  || ||||||||||| || 
Sbjct: 885  tacatgacacaagaaaactggaactcagctagattctgcaaaatctctgattttgtctcg 826

                                                                        
Query: 436  cctccttcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctttc 495
            || |||||||| ||||| ||||| || ||||| | ||||||||||| ||| |||||||| 
Sbjct: 825  ccgccttcaatctcataagaatctaggtcacccatcttcccaccagcttctgattctttt 766

                                                                        
Query: 496  tccataacctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagactga 555
            ||   |||||| ||||| ||||||||  ||| ||| ||| |||| || |||||||| || 
Sbjct: 765  tctgcaacctcgggggaaagtattgttaccattgtgggcttaaacgatatgacagattgg 706

                                                                        
Query: 556  aacttgttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctgcg 615
            |||||||| |||| ||| || | |||||||||||| ||||||||||| || ||||| |||
Sbjct: 705  aacttgttgaaaataaccctcagagcatcatattccacatttttcaatatgtcatccgcg 646

                                                                        
Query: 616  agcacagcaacctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttca 675
            ||||| ||||||||||||||||| ||||||||||||||||  |||| | | |||||||||
Sbjct: 645  agcacggcaacctgtgtgtagttgatagggttcttctgcagttcagttgcagtcatttca 586

              
Query: 676  at 677
            ||
Sbjct: 585  at 584
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>gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence
          Length = 1345

 Score =  234 bits (118), Expect = 3e-58
 Identities = 378/464 (81%), Gaps = 8/464 (1%)
 Strand = Plus / Minus

                                                                        
Query: 194  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 253
            |||| ||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||
Sbjct: 1039 atccttcaagggctgatgcaccagatataatctcagtaagctctgtggtgatggatgctt 980

                                                                        
Query: 254  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 313
            | |||||||||||||| || || || ||||| |||||| | | ||  ||||||||||| |
Sbjct: 979  ggcgtgtcctgttgtaagtaagcgtgagacgatcaagcctattacgagcatttctgctag 920

                                                                        
Query: 314  agctgtccatagcagaca----tacgggcaccaagctcactgcaggcattctctagaaca 369
            |||||||||| |||||||    || ||    ||||||||||||| |||||||||||  ||
Sbjct: 919  agctgtccatggcagacacttttaagg----caagctcactgcatgcattctctagggca 864

                                                                        
Query: 370  gcattatacataacacaagaaaactggaactcggtaagattctgcaggatttctgatttt 429
             |||| ||||| |||||||||||||||||||| |  || || ||||  || |||| ||||
Sbjct: 863  ccattgtacatgacacaagaaaactggaactcagctaggttttgcaatatctctgctttt 804

                                                                        
Query: 430  gtttcacctccttcaatttcatacgaatccagctcaccaaccttcccaccagattccgat 489
            || ||||| |||||||| ||||| ||||  || |||||   ||||||||||| ||| | |
Sbjct: 803  gtctcaccgccttcaatctcataagaatttaggtcacccgtcttcccaccagcttctgct 744

                                                                        
Query: 490  tctttctccataacctctggggacagtattgtggccaatgtaggcctaaatgaaatgaca 549
            ||||| ||   |||||| ||||||||||| ||  ||| ||| ||| |||| || ||||||
Sbjct: 743  tctttttctgcaacctcaggggacagtatcgttaccattgtgggcttaaacgatatgaca 684

                                                                        
Query: 550  gactgaaacttgttaaaaacaactcttatagcatcatattcaacatttttcaagatatca 609
            || || |||||||| |||| ||| |||| |||||||||||| ||||||||||| || |||
Sbjct: 683  gaatggaacttgttgaaaataacccttagagcatcatattccacatttttcaatatgtca 624

                                                        
Query: 610  tctgcgagcacagcaacctgtgtgtagttaatagggttcttctg 653
            || ||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 623  tccgcgagcacagcaatctgtgtatagttgatagggttcttctg 580



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 704 tgaactttccccttttctnctaatatgacatacttgctttct 745
           |||||||| || |||||| ||||||| |||||||||||||||
Sbjct: 530 tgaactttgcctttttctcctaatataacatacttgctttct 489
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>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0053D03, complete sequence
          Length = 150496

 Score =  178 bits (90), Expect = 2e-41
 Identities = 116/124 (93%), Gaps = 3/124 (2%)
 Strand = Plus / Minus

                                                                         
Query: 382   acacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacctcct 441
             |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 23334 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 23275

                                                                         
Query: 442   tcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctttctccata 501
             ||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||||
Sbjct: 23274 tcaatttcatatgaatccaggtcaccaacctt---accagattccgattctttctccata 23218

                 
Query: 502   acct 505
             ||||
Sbjct: 23217 acct 23214



 Score =  149 bits (75), Expect = 2e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                         
Query: 261   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 320
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 23627 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 23568

                                                                         
Query: 321   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 380
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 23567 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 23508

                
Query: 381   aac 383
             |||
Sbjct: 23507 aac 23505



 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/121 (90%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                         
Query: 625   acctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttcaatatgcttc 684
             |||||||||||||| |||||||||||||||||||||||||||||||| || || |  | |
Sbjct: 21300 acctgtgtgtagttgatagggttcttctgcaactcagatactgtcatctcgatgttatcc 21241

                                                                         
Query: 685   ctggagtcacgggatgagttgaactttccccttttctnctaatatgacatacttgctttc 744
              ||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 21240 ttggagtcac-gaatgagttgaactttacccttttctcctaatatgacatacttgctttc 21182

              
Query: 745   t 745
             |
Sbjct: 21181 t 21181



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 502   acctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagactgaaacttg 561
             ||||||||||| ||||| || | || ||| ||| | ||||| ||||| || || ||||||
Sbjct: 23125 acctctggggaaagtatggttgtcattgtgggcttgaatgatatgaccgagtggaacttg 23066

                                                                         
Query: 562   ttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctgcgagcaca 621
             ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 23065 ttaaaaacaacccttagagcatcatactcaacatttttcaagatatcatctgccagcaca 23006

                 
Query: 622   gcaa 625
             ||||
Sbjct: 23005 gcaa 23002



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 182   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 24040 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 23981

                                    
Query: 242   tgatagatgcttgacgtgtcctg 264
             |||||||||||||||||||||||
Sbjct: 23980 tgatagatgcttgacgtgtcctg 23958
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>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053D03, from chromosome 10, complete sequence
          Length = 199113

 Score =  178 bits (90), Expect = 2e-41
 Identities = 116/124 (93%), Gaps = 3/124 (2%)
 Strand = Plus / Plus

                                                                         
Query: 382   acacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacctcct 441
             |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 36667 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 36726

                                                                         
Query: 442   tcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctttctccata 501
             ||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||||
Sbjct: 36727 tcaatttcatatgaatccaggtcaccaacctt---accagattccgattctttctccata 36783

                 
Query: 502   acct 505
             ||||
Sbjct: 36784 acct 36787



 Score =  149 bits (75), Expect = 2e-32
 Identities = 111/123 (90%)
 Strand = Plus / Plus

                                                                         
Query: 261   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 320
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 36374 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 36433

                                                                         
Query: 321   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 380
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 36434 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 36493

                
Query: 381   aac 383
             |||
Sbjct: 36494 aac 36496



 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/121 (90%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 625   acctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttcaatatgcttc 684
             |||||||||||||| |||||||||||||||||||||||||||||||| || || |  | |
Sbjct: 38701 acctgtgtgtagttgatagggttcttctgcaactcagatactgtcatctcgatgttatcc 38760

                                                                         
Query: 685   ctggagtcacgggatgagttgaactttccccttttctnctaatatgacatacttgctttc 744
              ||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 38761 ttggagtcac-gaatgagttgaactttacccttttctcctaatatgacatacttgctttc 38819

              
Query: 745   t 745
             |
Sbjct: 38820 t 38820



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                         
Query: 502   acctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagactgaaacttg 561
             ||||||||||| ||||| || | || ||| ||| | ||||| ||||| || || ||||||
Sbjct: 36876 acctctggggaaagtatggttgtcattgtgggcttgaatgatatgaccgagtggaacttg 36935

                                                                         
Query: 562   ttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctgcgagcaca 621
             ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 36936 ttaaaaacaacccttagagcatcatactcaacatttttcaagatatcatctgccagcaca 36995

                 
Query: 622   gcaa 625
             ||||
Sbjct: 36996 gcaa 36999



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                         
Query: 182   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 35961 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 36020

                                    
Query: 242   tgatagatgcttgacgtgtcctg 264
             |||||||||||||||||||||||
Sbjct: 36021 tgatagatgcttgacgtgtcctg 36043
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  178 bits (90), Expect = 2e-41
 Identities = 116/124 (93%), Gaps = 3/124 (2%)
 Strand = Plus / Minus

                                                                           
Query: 382     acacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacctcct 441
               |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 8219812 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 8219753

                                                                           
Query: 442     tcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctttctccata 501
               ||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||||
Sbjct: 8219752 tcaatttcatatgaatccaggtcaccaacctt---accagattccgattctttctccata 8219696

                   
Query: 502     acct 505
               ||||
Sbjct: 8219695 acct 8219692



 Score =  149 bits (75), Expect = 2e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 261     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 320
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8220105 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8220046

                                                                           
Query: 321     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 380
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8220045 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8219986

                  
Query: 381     aac 383
               |||
Sbjct: 8219985 aac 8219983



 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/121 (90%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                           
Query: 625     acctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttcaatatgcttc 684
               |||||||||||||| |||||||||||||||||||||||||||||||| || || |  | |
Sbjct: 8217778 acctgtgtgtagttgatagggttcttctgcaactcagatactgtcatctcgatgttatcc 8217719

                                                                           
Query: 685     ctggagtcacgggatgagttgaactttccccttttctnctaatatgacatacttgctttc 744
                ||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 8217718 ttggagtcac-gaatgagttgaactttacccttttctcctaatatgacatacttgctttc 8217660

                
Query: 745     t 745
               |
Sbjct: 8217659 t 8217659



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                           
Query: 502     acctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagactgaaacttg 561
               ||||||||||| ||||| || | || ||| ||| | ||||| ||||| || || ||||||
Sbjct: 8219603 acctctggggaaagtatggttgtcattgtgggcttgaatgatatgaccgagtggaacttg 8219544

                                                                           
Query: 562     ttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctgcgagcaca 621
               ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 8219543 ttaaaaacaacccttagagcatcatactcaacatttttcaagatatcatctgccagcaca 8219484

                   
Query: 622     gcaa 625
               ||||
Sbjct: 8219483 gcaa 8219480



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 182     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8220518 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8220459

                                      
Query: 242     tgatagatgcttgacgtgtcctg 264
               |||||||||||||||||||||||
Sbjct: 8220458 tgatagatgcttgacgtgtcctg 8220436
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  178 bits (90), Expect = 2e-41
 Identities = 116/124 (93%), Gaps = 3/124 (2%)
 Strand = Plus / Minus

                                                                           
Query: 382     acacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacctcct 441
               |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 8224911 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 8224852

                                                                           
Query: 442     tcaatttcatacgaatccagctcaccaaccttcccaccagattccgattctttctccata 501
               ||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||||
Sbjct: 8224851 tcaatttcatatgaatccaggtcaccaacctt---accagattccgattctttctccata 8224795

                   
Query: 502     acct 505
               ||||
Sbjct: 8224794 acct 8224791



 Score =  149 bits (75), Expect = 2e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 261     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 320
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8225204 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8225145

                                                                           
Query: 321     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 380
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8225144 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8225085

                  
Query: 381     aac 383
               |||
Sbjct: 8225084 aac 8225082



 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/121 (90%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                           
Query: 625     acctgtgtgtagttaatagggttcttctgcaactcagatactgtcatttcaatatgcttc 684
               |||||||||||||| |||||||||||||||||||||||||||||||| || || |  | |
Sbjct: 8222877 acctgtgtgtagttgatagggttcttctgcaactcagatactgtcatctcgatgttatcc 8222818

                                                                           
Query: 685     ctggagtcacgggatgagttgaactttccccttttctnctaatatgacatacttgctttc 744
                ||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 8222817 ttggagtcac-gaatgagttgaactttacccttttctcctaatatgacatacttgctttc 8222759

                
Query: 745     t 745
               |
Sbjct: 8222758 t 8222758



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                           
Query: 502     acctctggggacagtattgtggccaatgtaggcctaaatgaaatgacagactgaaacttg 561
               ||||||||||| ||||| || | || ||| ||| | ||||| ||||| || || ||||||
Sbjct: 8224702 acctctggggaaagtatggttgtcattgtgggcttgaatgatatgaccgagtggaacttg 8224643

                                                                           
Query: 562     ttaaaaacaactcttatagcatcatattcaacatttttcaagatatcatctgcgagcaca 621
               ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 8224642 ttaaaaacaacccttagagcatcatactcaacatttttcaagatatcatctgccagcaca 8224583

                   
Query: 622     gcaa 625
               ||||
Sbjct: 8224582 gcaa 8224579



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 182     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 241
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8225617 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8225558

                                      
Query: 242     tgatagatgcttgacgtgtcctg 264
               |||||||||||||||||||||||
Sbjct: 8225557 tgatagatgcttgacgtgtcctg 8225535
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>dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma subunit, complete cds
          Length = 1389

 Score =  176 bits (89), Expect = 7e-41
 Identities = 338/421 (80%)
 Strand = Plus / Minus

                                                                        
Query: 241  gtgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccg 300
            ||||||||||||||||| || |||||||| || || || || || |||||||||||||| 
Sbjct: 1010 gtgatagatgcttgacgggttctgttgtaagtgagggtgaggcgatcaagcatttcacca 951

                                                                        
Query: 301  gcatttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattc 360
            ||||| ||||||||||||||||| |||||||| |  || ||  |||||||||| ||||||
Sbjct: 950  gcattcctgctggagctgtccatggcagacatccttgccccttgctcactgcaagcattc 891

                                                                        
Query: 361  tctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggatt 420
            ||||||||||||||  |||  ||||  ||||| ||||| || || |||||||| |||| |
Sbjct: 890  tctagaacagcattgaacaatacacttgaaaattggaattcagtgagattctgaaggact 831

                                                                        
Query: 421  tctgattttgtttcacctccttcaatttcatacgaatccagctcaccaaccttcccacca 480
            ||||| ||||  ||| | |||||||||||||| |||||||  || |||| ||| || |||
Sbjct: 830  tctgactttgactcagcaccttcaatttcataagaatccaaatcgccaagctttccccca 771

                                                                        
Query: 481  gattccgattctttctccataacctctggggacagtattgtggccaatgtaggcctaaat 540
            ||||| |||||| |||||| |||||| || || | ||  || | ||  || |||  ||||
Sbjct: 770  gattcagattctctctccacaacctcaggtgataatacagtagacatggttggcacaaat 711

                                                                        
Query: 541  gaaatgacagactgaaacttgttaaaaacaactcttatagcatcatattcaacatttttc 600
            || |  || ||||| |||||||| ||||||| ||||| ||||||| | || |||||||| 
Sbjct: 710  gagacaactgactggaacttgttgaaaacaattcttagagcatcaaactctacattttta 651

                                                                        
Query: 601  aagatatcatctgcgagcacagcaacctgtgtgtagttaatagggttcttctgcaactca 660
            | ||| ||||| || | ||| |  ||||| || ||||| | ||| |||||||||||||||
Sbjct: 650  aggatgtcatcagcaaccactgagacctgagtatagttgagaggattcttctgcaactca 591

             
Query: 661  g 661
            |
Sbjct: 590  g 590
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>dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gamma subunit, complete
            cds
          Length = 1412

 Score =  172 bits (87), Expect = 1e-39
 Identities = 234/283 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 276
            ||||||||||| || || || || ||||||||||||||||| || |||||||| || || 
Sbjct: 1033 gatatgatctctgtcagttctgtggtgatagatgcttgacgggttctgttgtaagtgagg 974

                                                                        
Query: 277  gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 336
            || || || |||||||||||||| ||||| ||||||||||||||||| |||||||| |  
Sbjct: 973  gtgaggcgatcaagcatttcaccagcattcctgctggagctgtccatggcagacatcctt 914

                                                                        
Query: 337  gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 396
            || ||  |||||||||| ||||||||||||||||||||  |||| ||||| ||||| |||
Sbjct: 913  gccccttgctcactgcaagcattctctagaacagcattgaacattacacatgaaaattgg 854

                                                                        
Query: 397  aactcggtaagattctgcaggatttctgattttgtttcacctccttcaatttcatacgaa 456
            || || || |||||||| || | |||||| ||||  ||| | |||||||||||||| |||
Sbjct: 853  aattcagtgagattctgaagtacttctgactttgactcagcaccttcaatttcataagaa 794

                                                       
Query: 457  tccagctcaccaaccttcccaccagattccgattctttctcca 499
            ||||  || || | ||| || |||||||| |||||| ||||||
Sbjct: 793  tccaaatcgccgagctttcccccagattcagattctctctcca 751



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 91/112 (81%)
 Strand = Plus / Minus

                                                                       
Query: 550 gactgaaacttgttaaaaacaactcttatagcatcatattcaacatttttcaagatatca 609
           ||||| |||||||| ||||||| ||||| ||||||| | || |||||||| | ||| |||
Sbjct: 700 gactggaacttgttgaaaacaattcttagagcatcaaactctacatttttaaggatgtca 641

                                                               
Query: 610 tctgcgagcacagcaacctgtgtgtagttaatagggttcttctgcaactcag 661
           || || | ||| |  ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 640 tcagcaaccactgagacctgagtatagttgagaggattcttctgcaactcag 589
to top
>ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
            mechanism / hydrogen-transporting ATPase, rotational
            mechanism AT2G33040 mRNA, complete cds
          Length = 1309

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 918  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 859

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 858  ccttcaatctcatatgagtcaagctcgccaa 828
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>gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
           (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1092

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                       
Query: 199 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 259 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 319 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                                       
Query: 379 ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
           || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 785 atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 726

                                          
Query: 439 ccttcaatttcatacgaatccagctcaccaa 469
           |||||||| ||||| || || ||||| ||||
Sbjct: 725 ccttcaatctcatatgagtcaagctcgccaa 695
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>gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1265

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1053 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 994

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 993  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 934

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 933  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 874

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 873  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 814

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 813  ccttcaatctcatatgagtcaagctcgccaa 783
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>gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 978

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                       
Query: 199 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 259 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 319 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                                       
Query: 379 ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
           || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 785 atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 726

                                          
Query: 439 ccttcaatttcatacgaatccagctcaccaa 469
           |||||||| ||||| || || ||||| ||||
Sbjct: 725 ccttcaatctcatatgagtcaagctcgccaa 695
to top
>gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040; F25I18.22) mRNA, complete cds
          Length = 1360

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1064 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1005

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1004 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 945

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 944  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 885

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 884  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 825

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 824  ccttcaatctcatatgagtcaagctcgccaa 794
to top
>gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 1238

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1051 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 992

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 991  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 932

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 931  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 872

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 871  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 812

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 811  ccttcaatctcatatgagtcaagctcgccaa 781
to top
>emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1205

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1068 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1009

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1008 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 949

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 948  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 889

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 888  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 829

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 828  ccttcaatctcatatgagtcaagctcgccaa 798
to top
>gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete sequence
          Length = 1310

 Score =  141 bits (71), Expect = 4e-30
 Identities = 221/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 918  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 859

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            |||||||| ||||| || || ||||| ||||
Sbjct: 858  ccttcaatctcatatgagtcaagctcgccaa 828
to top
>dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mitochondrial
            F1-ATPase, complete cds
          Length = 1267

 Score =  133 bits (67), Expect = 9e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1039 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 980

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 979  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 920

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 919  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 860

                                                                        
Query: 379  ataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgtttcacct 438
            || |||||||| || ||||||||||  ||||||||||  ||||||   |||||||| || 
Sbjct: 859  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 800

                                           
Query: 439  ccttcaatttcatacgaatccagctcaccaa 469
            || ||||| ||||| || || ||||| ||||
Sbjct: 799  ccctcaatctcatatgagtcaagctcgccaa 769
to top
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence,
            complete sequence
          Length = 96801

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 4494 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 4435

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 4434 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 4375

                                                                    
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 374
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 4374 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 4319
to top
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
             sequence
          Length = 93158

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                         
Query: 199   tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
             ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 81469 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 81410

                                                                         
Query: 259   gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
             |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 81409 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 81350

                                                                     
Query: 319   tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 374
             ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 81349 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 81294
to top
>gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chain mRNA, nuclear gene
           encoding mitochondrial protein, partial cds
          Length = 718

 Score =  103 bits (52), Expect = 8e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 217 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 276
           |||||||||||| | ||||| || ||||||||||||||||| || |||||||| || || 
Sbjct: 475 gatatgatctcaatcagctctgtggtgatagatgcttgacgggttctgttgtaagtaaga 416

                                                                   
Query: 277 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacat 332
           || ||||| |||||||| ||| |||||||||||||||| || ||||| ||||||||
Sbjct: 415 gtgagacgatcaagcatgtcaacggcatttctgctggaactatccatggcagacat 360



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 580 gcatcatattcaacatttttcaagatatcatctgcgagcacagcaacctgtgtgtagtta 639
           |||||| |||||||||| |||||||| | |||||| | ||||| ||||||||| ||||||
Sbjct: 112 gcatcaaattcaacattcttcaagatgtaatctgccatcacagaaacctgtgtatagtta 53

                                 
Query: 640 atagggttcttctgcaactcag 661
           | ||| || |||||||||||||
Sbjct: 52  agaggatttttctgcaactcag 31
to top
>emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH44ZD12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 173/216 (80%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 258
            ||||||||||| || || || || || ||| ||||||| || |||||||| |||||||| 
Sbjct: 1080 tcaagagcagaagctccagagataatgtcaatgagctctgttgtgatagaagcttgacga 1021

                                                                        
Query: 259  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 318
            || ||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1020 gttctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 961

                                                                        
Query: 319  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 378
            | ||| ||||| || |  || || | || ||| || |||||| | ||||| |||||  ||
Sbjct: 960  ttcatggcagagattcttgcgcccatctgactacatgcattcgccagaaccgcattgaac 901

                                                
Query: 379  ataacacaagaaaactggaactcggtaagattctgc 414
            || ||| |||| || ||||||||||  |||||||||
Sbjct: 900  atgacagaagagaattggaactcggccagattctgc 865
to top
>emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, locus AT7D8
          Length = 408

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                       
Query: 280 agacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgggca 339
           |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  || 
Sbjct: 244 agacggtcaagcatttcaccagcatttctgcttgagctatccatggcagacatccttgct 185

                                    
Query: 340 ccaagctcactgcaggcattctcta 364
           ||  |||||||||| ||||||||||
Sbjct: 184 ccttgctcactgcaagcattctcta 160
to top
>gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, partial cds
          Length = 1083

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 216/275 (78%)
 Strand = Plus / Minus

                                                                       
Query: 217 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 276
           ||||| |||||| | | |||||| | ||| || |||||||| || ||||| ||||| || 
Sbjct: 784 gatataatctcaatcaactccgtggggattgaagcttgacgggttctgttatatgtaaga 725

                                                                       
Query: 277 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 336
           || ||  | |||||||| || ||||| |||||||| ||||| |||||||||||||| |  
Sbjct: 724 gtcaggggatcaagcatgtcgccggcgtttctgcttgagctatccatagcagacatcctt 665

                                                                       
Query: 337 gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 396
           || ||  ||||||| || |||||||| | ||| |||||  |||| |||||||| ||||||
Sbjct: 664 gctccttgctcactacaagcattctccaaaaccgcattgaacatgacacaagagaactgg 605

                                                                       
Query: 397 aactcggtaagattctgcaggatttctgattttgtttcacctccttcaatttcatacgaa 456
           ||||| |  ||||| || || |||||    ||||| ||||| || |||| |||||| || 
Sbjct: 604 aactcagccagattttgaagtatttcaccctttgtctcaccaccctcaacttcataggag 545

                                              
Query: 457 tccagctcaccaaccttcccaccagattccgattc 491
           || || ||||||| ||| || |||||||| |||||
Sbjct: 544 tctagttcaccaagctttcccccagattcagattc 510
to top
>emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12,
             complete sequence
          Length = 192457

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 586   tattcaacatttttcaagatatcatct 612
             ||||||||||||||||| |||||||||
Sbjct: 31725 tattcaacatttttcaaaatatcatct 31751
to top
>emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in linkage group 14,
             complete sequence
          Length = 174366

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 26    aacaaaatgaaacaaggttgat 47
             ||||||||||||||||||||||
Sbjct: 76742 aacaaaatgaaacaaggttgat 76763
to top
>emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in linkage group 5, complete
              sequence
          Length = 151639

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 26     aacaaaatgaaacaaggttgat 47
              ||||||||||||||||||||||
Sbjct: 141154 aacaaaatgaaacaaggttgat 141175
to top
>gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete sequence
          Length = 184109

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 384    acaagaaaactggaactcggt 404
              |||||||||||||||||||||
Sbjct: 164885 acaagaaaactggaactcggt 164865
to top
>gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete sequence
          Length = 181178

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   acaagaaaactggaactcggt 404
             |||||||||||||||||||||
Sbjct: 29788 acaagaaaactggaactcggt 29808
to top
>emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 in linkage group 19,
              complete sequence
          Length = 171079

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 588    ttcaacatttttcaagatatcatct 612
              ||||||||||||||| |||||||||
Sbjct: 145245 ttcaacatttttcaaaatatcatct 145221
to top
>gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, complete sequence
          Length = 155742

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 347   cactgcaggcattctctagaa 367
             |||||||||||||||||||||
Sbjct: 28734 cactgcaggcattctctagaa 28754
to top
>emb|BX088705.18| Zebrafish DNA sequence from clone DKEY-21G19, complete sequence
          Length = 204103

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 588   ttcaacatttttcaagatatcatct 612
             ||||||||||||||| |||||||||
Sbjct: 46684 ttcaacatttttcaaaatatcatct 46708
to top
>gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, complete sequence
          Length = 239704

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 112    agaaaacaaaaggctgtttcagatt 136
              ||||| |||||||||||||||||||
Sbjct: 116217 agaaaccaaaaggctgtttcagatt 116193
to top
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone
             BACR32F24, complete sequence
          Length = 162307

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   taaagacgatggtgtagagtt 185
             |||||||||||||||||||||
Sbjct: 60105 taaagacgatggtgtagagtt 60125
to top
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete
             sequence
          Length = 290619

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   taaagacgatggtgtagagtt 185
             |||||||||||||||||||||
Sbjct: 96699 taaagacgatggtgtagagtt 96719
to top
>gb|BC097063.1| Danio rerio Sec23 homolog A (S. cerevisiae), mRNA (cDNA clone
            MGC:113987 IMAGE:2601268), complete cds
          Length = 3189

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 588  ttcaacatttttcaagatatc 608
            |||||||||||||||||||||
Sbjct: 3137 ttcaacatttttcaagatatc 3157


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,451,846
Number of Sequences: 3902068
Number of extensions: 8451846
Number of successful extensions: 189704
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 189538
Number of HSP's gapped (non-prelim): 149
length of query: 745
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 722
effective length of database: 17,143,297,704
effective search space: 12377460942288
effective search space used: 12377460942288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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