| Clone Name | rbags29j07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 890 bits (449), Expect = 0.0 Identities = 518/541 (95%) Strand = Plus / Minus Query: 65 ttattattcgtggagcacgagcatggggcaaccaaatggccgcagccgacctaggcgatg 124 |||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||||| Sbjct: 2667 ttattattcgtggaccacgagcacggggcaatcaaatagccgcaaccgacctaggcgatg 2608 Query: 125 tagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 184 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 2607 tagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 2548 Query: 185 ctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttcctc 244 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2547 ctccactggtcgccgatgttgccgacgatgacgtacccggcatcctccagcttcttcctc 2488 Query: 245 tcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcaggttc 304 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 2487 tcggcggacttgtaggatatggcggagcccttgaacccatgttgcttgagcgtcaggctc 2428 Query: 305 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctcc 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2427 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttatcctcc 2368 Query: 365 gtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccgc 424 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2367 gtccggcctgtgatgaataccggcttgatgcccaccttgagtagcttgtagtagagccgc 2308 Query: 425 ttcgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgcg 484 ||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 2307 ttcgtctccggcagcaccggtgcactcccctccatcacgtacgcgtcgaagctcgtcgcg 2248 Query: 485 ttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggtc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2247 ttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggtc 2188 Query: 545 tcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttgaggccgtcgacg 604 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2187 tcgtcgatgtcgaagacccacacgtccttgccgttgccggcgagcttgaggccgtcgacg 2128 Query: 605 t 605 | Sbjct: 2127 t 2127
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 890 bits (449), Expect = 0.0 Identities = 518/541 (95%) Strand = Plus / Minus Query: 65 ttattattcgtggagcacgagcatggggcaaccaaatggccgcagccgacctaggcgatg 124 |||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||||| Sbjct: 1071 ttattattcgtggaccacgagcacggggcaatcaaatagccgcaaccgacctaggcgatg 1012 Query: 125 tagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 184 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 952 Query: 185 ctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttcctc 244 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 951 ctccactggtcgccgatgttgccgacgatgacgtacccggcatcctccagcttcttcctc 892 Query: 245 tcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcaggttc 304 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 891 tcggcggacttgtaggatatggcggagcccttgaacccatgttgcttgagcgtcaggctc 832 Query: 305 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctcc 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 831 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttatcctcc 772 Query: 365 gtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccgc 424 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 gtccggcctgtgatgaataccggcttgatgcccaccttgagtagcttgtagtagagccgc 712 Query: 425 ttcgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgcg 484 ||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 711 ttcgtctccggcagcaccggtgcactcccctccatcacgtacgcgtcgaagctcgtcgcg 652 Query: 485 ttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggtc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 ttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggtc 592 Query: 545 tcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttgaggccgtcgacg 604 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 591 tcgtcgatgtcgaagacccacacgtccttgccgttgccggcgagcttgaggccgtcgacg 532 Query: 605 t 605 | Sbjct: 531 t 531
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 404 bits (204), Expect = e-109 Identities = 408/476 (85%) Strand = Plus / Minus Query: 122 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 181 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 535 atgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccgaggatg 476 Query: 182 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 475 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagcttctgg 416 Query: 242 ctctcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcagg 301 | |||| |||||||||||| ||||||| | |||||| ||| |||||||| ||| Sbjct: 415 cgctcgccggacttgtaggcgatggcggtggccttgaggccgacgggcttgagcagcagc 356 Query: 302 ttcatccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcc 361 ||||||| |||||| | ||||||| ||||||||| |||||||| |||||||| |||| Sbjct: 355 gtcatccagccggagtacccctggcggcggaggttggtgacggtgatggccctctggtcc 296 Query: 362 tccgtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagc 421 || || ||||| || | |||||||||||||||||||| | || ||||| | | | ||| Sbjct: 295 tcggtgcggcccgtcaggaacaccggcttgatgcccagcgagacgagcttcttgaacagc 236 Query: 422 cgcttcgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtc 481 |||| ||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 235 cgctgcgtctccgggagcaccggcgcgctcccctccagcacgtactcgttgaagctcgtc 176 Query: 482 gcgttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtg 541 ||||||||| || ||| || |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 175 gcgttgtatagcttagtgccgaagccgtgggtggcatagtaggggagattggagagggac 116 Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttgaggcc 597 ||||||||||| ||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 115 gtctcgtcgatatcgaagacccagacctccttgccgttgccgcccagcttgaggcc 60
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 122 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 181 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279 Query: 182 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 241 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339 Query: 242 ctctcggcggacttgta 258 | |||| |||||||||| Sbjct: 80340 cgctcgccggacttgta 80356 Score = 143 bits (72), Expect = 8e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 89813 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 89872 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||||||||||||||| |||||||| ||||||||| | | ||||| |||| | Sbjct: 89873 ccgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcc 89932 Query: 233 agcttcttcctctcggcggacttg 256 ||||||| || |||| |||||||| Sbjct: 89933 agcttctgccgctcgccggacttg 89956 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 90312 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 90371 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||||||||||||||| |||||||| ||||| ||| | | ||||| |||| | Sbjct: 90372 ccgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcc 90431 Query: 233 agcttcttcctctcggcggacttg 256 ||||||| || |||| |||||||| Sbjct: 90432 agcttctgccgctcgccggacttg 90455 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 506 ccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccac 565 |||||| ||||| |||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 91973 ccgtgcttggcgaagtaggggaggttggagagggaggtctcgtcgatgtcgaacacccag 92032 Query: 566 acgtccttgccgttgccgttgagcttgaggccgtcgacgt 605 | ||||||||||||||| ||||||||||| ||| |||| Sbjct: 92033 atctccttgccgttgccggcgagcttgaggctgtccacgt 92072 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 506 ccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccac 565 |||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 105593 ccgtgcttggcgtagtaggggaggttggagagggaggtctcgtcgatgtcgaacacccag 105652 Query: 566 acgtccttgccgttgccgttgagcttgaggc 596 | ||||||||||||||| ||||| ||||| Sbjct: 105653 atctccttgccgttgccggagagctggaggc 105683 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 104197 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 104256 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 104257 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 104316 Query: 233 agcttcttcctctcggcggacttgta 258 ||||| | || |||| |||||||||| Sbjct: 104317 agcttttgccgctcgccggacttgta 104342 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 503 aagccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacc 562 ||||||||| |||||||||| |||||||||||||| | |||||||||||||||||| ||| Sbjct: 83693 aagccgtgcttggcgtagtaggggaggttggagagagaggtctcgtcgatgtcgaacacc 83752 Query: 563 cacacgtccttgccgttgccgttgagcttgagg 595 || | |||||||| |||||| |||||||||| Sbjct: 83753 cagatctccttgccattgccggcgagcttgagg 83785 Score = 69.9 bits (35), Expect = 9e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 307 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 366 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 80479 Query: 367 ccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccgctt 426 |||||||| | |||||||||||||| ||| | || || ||| |||||| || | | | Sbjct: 80480 gcggcctgttaggaacaccggcttgacgccgagctcaagcagccggtagtacagtcacct 80539 Query: 427 cgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgcgtt 486 |||||| ||||||||||| ||||||||||| ||||||| | ||||| |||||||| Sbjct: 80540 cgtctctggcagcgccggtgcgctcccctctgccacgtactcacgaaagcttgtcgcgtt 80599 Query: 487 gtatggc 493 ||||||| Sbjct: 80600 gtatggc 80606 Score = 60.0 bits (30), Expect = 9e-06 Identities = 120/150 (80%) Strand = Plus / Plus Query: 304 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 363 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 104403 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462 Query: 364 cgtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccg 423 || ||||| || | |||||||||||||| ||| | || ||| ||| ||| | ||| Sbjct: 104463 ggtgcggcccgtcaggaacaccggcttgacgccgagctggagcagccgccggtacaaccg 104522 Query: 424 cttcgtctccggcagcgccggcgcgctccc 453 | |||||||||||||||||||||||||||| Sbjct: 104523 cctcgtctccggcagcgccggcgcgctccc 104552 Score = 60.0 bits (30), Expect = 9e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 288 gcttgagcgtcaggttcatccacccggagaagccctggctgcggaggttcccgacggtga 347 |||||||| ||| ||||||||||||||| | ||||| | ||| ||||| |||||||| Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561 Query: 348 cggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcccaccttgagta 407 | ||| | |||||| || |||| ||| | |||||||||||||| ||| | || ||| | Sbjct: 90562 tgttcctttcgtcctcggtgcggcttgtcaagaacaccggcttgacgccgagctggagca 90621 Query: 408 gcttgtagtagagccgcttcgtctccggcagcgccggcgcgctcccctccagcacgta 465 || ||| | |||| ||||||||||||||||| || |||||||||||| |||||| Sbjct: 90622 gccgccggtacaaccgcctcgtctccggcagcgccagcccgctcccctccaccacgta 90679 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 5477 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 5530 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 5800 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 5859 Query: 591 tgaggc 596 |||||| Sbjct: 5860 tgaggc 5865
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 122 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 181 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070 Query: 182 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 241 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130 Query: 242 ctctcggcggacttgta 258 | |||| |||||||||| Sbjct: 5547131 cgctcgccggacttgta 5547147 Score = 143 bits (72), Expect = 8e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 5556604 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 5556663 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||||||||||||||| |||||||| ||||||||| | | ||||| |||| | Sbjct: 5556664 ccgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcc 5556723 Query: 233 agcttcttcctctcggcggacttg 256 ||||||| || |||| |||||||| Sbjct: 5556724 agcttctgccgctcgccggacttg 5556747 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 5557103 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 5557162 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||||||||||||||| |||||||| ||||| ||| | | ||||| |||| | Sbjct: 5557163 ccgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcc 5557222 Query: 233 agcttcttcctctcggcggacttg 256 ||||||| || |||| |||||||| Sbjct: 5557223 agcttctgccgctcgccggacttg 5557246 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 506 ccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccac 565 |||||| ||||| |||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 5558764 ccgtgcttggcgaagtaggggaggttggagagggaggtctcgtcgatgtcgaacacccag 5558823 Query: 566 acgtccttgccgttgccgttgagcttgaggccgtcgacgt 605 | ||||||||||||||| ||||||||||| ||| |||| Sbjct: 5558824 atctccttgccgttgccggcgagcttgaggctgtccacgt 5558863 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 506 ccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccac 565 |||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 5572384 ccgtgcttggcgtagtaggggaggttggagagggaggtctcgtcgatgtcgaacacccag 5572443 Query: 566 acgtccttgccgttgccgttgagcttgaggc 596 | ||||||||||||||| ||||| ||||| Sbjct: 5572444 atctccttgccgttgccggagagctggaggc 5572474 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 5570988 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 5571047 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 5571048 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 5571107 Query: 233 agcttcttcctctcggcggacttgta 258 ||||| | || |||| |||||||||| Sbjct: 5571108 agcttttgccgctcgccggacttgta 5571133 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 503 aagccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacc 562 ||||||||| |||||||||| |||||||||||||| | |||||||||||||||||| ||| Sbjct: 5550484 aagccgtgcttggcgtagtaggggaggttggagagagaggtctcgtcgatgtcgaacacc 5550543 Query: 563 cacacgtccttgccgttgccgttgagcttgagg 595 || | |||||||| |||||| |||||||||| Sbjct: 5550544 cagatctccttgccattgccggcgagcttgagg 5550576 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 115 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 174 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 5459667 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 5459726 Query: 175 gaggatgtcgctccactggtcgccgatgttgcc 207 |||||||| |||||||||||| ||||||||||| Sbjct: 5459727 gaggatgttgctccactggtcaccgatgttgcc 5459759 Score = 69.9 bits (35), Expect = 9e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 307 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 366 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 5547270 Query: 367 ccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccgctt 426 |||||||| | |||||||||||||| ||| | || || ||| |||||| || | | | Sbjct: 5547271 gcggcctgttaggaacaccggcttgacgccgagctcaagcagccggtagtacagtcacct 5547330 Query: 427 cgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgcgtt 486 |||||| ||||||||||| ||||||||||| ||||||| | ||||| |||||||| Sbjct: 5547331 cgtctctggcagcgccggtgcgctcccctctgccacgtactcacgaaagcttgtcgcgtt 5547390 Query: 487 gtatggc 493 ||||||| Sbjct: 5547391 gtatggc 5547397 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 175 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 234 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 5452408 Query: 235 cttcttcc 242 |||||||| Sbjct: 5452409 cttcttcc 5452416 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 143 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 202 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454 Query: 203 ttgccgac 210 || ||||| Sbjct: 5399455 ttaccgac 5399462 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 534 agagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttga 593 ||||||||||||||||||||||||| ||||| | |||||||| | |||| |||||||| Sbjct: 5429858 agagggtggtctcgtcgatgtcgaacacccagatctccttgccatggccggagagcttga 5429917 Query: 594 ggc 596 ||| Sbjct: 5429918 ggc 5429920 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 5416642 ggatgtcgttccactggtcgccaatgttgccgacgatga 5416680 Score = 60.0 bits (30), Expect = 9e-06 Identities = 120/150 (80%) Strand = Plus / Plus Query: 304 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 363 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 5571194 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253 Query: 364 cgtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccg 423 || ||||| || | |||||||||||||| ||| | || ||| ||| ||| | ||| Sbjct: 5571254 ggtgcggcccgtcaggaacaccggcttgacgccgagctggagcagccgccggtacaaccg 5571313 Query: 424 cttcgtctccggcagcgccggcgcgctccc 453 | |||||||||||||||||||||||||||| Sbjct: 5571314 cctcgtctccggcagcgccggcgcgctccc 5571343 Score = 60.0 bits (30), Expect = 9e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 288 gcttgagcgtcaggttcatccacccggagaagccctggctgcggaggttcccgacggtga 347 |||||||| ||| ||||||||||||||| | ||||| | ||| ||||| |||||||| Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352 Query: 348 cggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcccaccttgagta 407 | ||| | |||||| || |||| ||| | |||||||||||||| ||| | || ||| | Sbjct: 5557353 tgttcctttcgtcctcggtgcggcttgtcaagaacaccggcttgacgccgagctggagca 5557412 Query: 408 gcttgtagtagagccgcttcgtctccggcagcgccggcgcgctcccctccagcacgta 465 || ||| | |||| ||||||||||||||||| || |||||||||||| |||||| Sbjct: 5557413 gccgccggtacaaccgcctcgtctccggcagcgccagcccgctcccctccaccacgta 5557470 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 5472268 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 5472321 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||||||||||| |||||| ||||| || |||||||| ||||| ||||| Sbjct: 5453460 tggagagtgcggtctcgtcgacgtcgaacacccagacctccttgccactgccggagagct 5453519 Query: 591 tgaggc 596 |||||| Sbjct: 5453520 tgaggc 5453525 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 5417897 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 5417956 Query: 591 tgaggc 596 |||||| Sbjct: 5417957 tgaggc 5417962 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 gtcgctccactggtcgccgatgttgccga 209 ||||||||||||||| ||||||||||||| Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 5472591 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 5472650 Query: 591 tgaggc 596 |||||| Sbjct: 5472651 tgaggc 5472656
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Minus Query: 122 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 181 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844 Query: 182 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 241 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784 Query: 242 ctctcggcggacttgta 258 | |||| |||||||||| Sbjct: 783 cgctcgccggacttgta 767 Score = 153 bits (77), Expect = 8e-34 Identities = 236/289 (81%) Strand = Plus / Minus Query: 307 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 366 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 644 Query: 367 ccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccgctt 426 |||||||| | |||||||||||||| ||| | || || ||| |||||| || | | | Sbjct: 643 gcggcctgttaggaacaccggcttgacgccgagctcaagcagccggtagtacagtcacct 584 Query: 427 cgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgcgtt 486 |||||| ||||||||||| ||||||||||| ||||||| | ||||| |||||||| Sbjct: 583 cgtctctggcagcgccggtgcgctcccctctgccacgtactcacgaaagcttgtcgcgtt 524 Query: 487 gtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggtctc 546 ||||||| | || || ||||||||| |||||||||| |||||||||||||| | |||||| Sbjct: 523 gtatggcgttgctccgaagccgtgcttggcgtagtaggggaggttggagagagaggtctc 464 Query: 547 gtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttgagg 595 |||||||||||| ||||| | |||||||| |||||| |||||||||| Sbjct: 463 gtcgatgtcgaacacccagatctccttgccattgccggcgagcttgagg 415
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 111 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 170 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 16055856 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 16055797 Query: 171 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 230 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 16055796 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 16055737 Query: 231 gcagcttcttcctctcggcggacttgta 258 ||||||||| | |||| |||||||||| Sbjct: 16055736 gcagcttctgacgctcgccggacttgta 16055709 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 426 tcgtctccggcagcgccggcgcgctcccctc 456 ||||||||||||||||||||||||||||||| Sbjct: 16055526 tcgtctccggcagcgccggcgcgctcccctc 16055496 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gccgcttcgtctccggcagcgccggcgc 447 |||||| |||||||||||||| |||||| Sbjct: 24124233 gccgctccgtctccggcagcggcggcgc 24124260
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 111 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 170 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 26189 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 26130 Query: 171 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 230 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 26129 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 26070 Query: 231 gcagcttcttcctctcggcggacttgta 258 ||||||||| | |||| |||||||||| Sbjct: 26069 gcagcttctgacgctcgccggacttgta 26042 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 426 tcgtctccggcagcgccggcgcgctcccctc 456 ||||||||||||||||||||||||||||||| Sbjct: 25859 tcgtctccggcagcgccggcgcgctcccctc 25829
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 111 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 170 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 137258 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 137199 Query: 171 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 230 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 137198 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 137139 Query: 231 gcagcttcttcctctcggcggacttgta 258 ||||||||| | |||| |||||||||| Sbjct: 137138 gcagcttctgacgctcgccggacttgta 137111 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 426 tcgtctccggcagcgccggcgcgctcccctc 456 ||||||||||||||||||||||||||||||| Sbjct: 136928 tcgtctccggcagcgccggcgcgctcccctc 136898
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Minus Query: 115 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 174 |||| |||||||||| ||||||||||||||||||||||||||||||||||| || || || Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352 Query: 175 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 234 | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||||||| Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292 Query: 235 cttcttcctctcggcggacttgta 258 ||||| | |||| |||||||||| Sbjct: 291 cttctgacgctcgccggacttgta 268 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 426 tcgtctccggcagcgccggcgcgctcccctc 456 ||||||||||||||||||||||||||||||| Sbjct: 85 tcgtctccggcagcgccggcgcgctcccctc 55
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 129 bits (65), Expect = 1e-26 Identities = 236/293 (80%) Strand = Plus / Minus Query: 304 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 363 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 680 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621 Query: 364 cgtccggcctgtgatgaacaccggcttgatgcccaccttgagtagcttgtagtagagccg 423 || ||||| || | |||||||||||||| ||| | || ||| ||| ||| | ||| Sbjct: 620 ggtgcggcccgtcaggaacaccggcttgacgccgagctggagcagccgccggtacaaccg 561 Query: 424 cttcgtctccggcagcgccggcgcgctcccctccagcacgtacgcgtcgaagctcgtcgc 483 | |||||||||||||||||||||||||||| ||| |||||| || ||||||||| | Sbjct: 560 cctcgtctccggcagcgccggcgcgctcccttccgccacgtattcgcggaagctcgtatc 501 Query: 484 gttgtatggcctagccccaaagccgtgcgtggcgtagtaagggaggttggagagggtggt 543 ||||| | |||| || || |||||| |||||||||| |||||||||||||||| ||| Sbjct: 500 attgtacagtgtagctccgaatccgtgcttggcgtagtaggggaggttggagagggaggt 441 Query: 544 ctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttgaggc 596 ||||||||||||||| ||||| | ||||||||||||||| ||||| ||||| Sbjct: 440 ctcgtcgatgtcgaacacccagatctccttgccgttgccggagagctggaggc 388 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 113 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 172 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 886 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 827 Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 232 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 826 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 767 Query: 233 agcttcttcctctcggcggacttgta 258 ||||| | || |||| |||||||||| Sbjct: 766 agcttttgccgctcgccggacttgta 741
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 691 gccggcgtcc 682 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 380 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 321 Query: 591 tgaggc 596 |||||| Sbjct: 320 tgaggc 315
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 32794 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 32853 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 32854 gccggcgtcc 32863 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 115 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 174 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 13998 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 14057 Query: 175 gaggatgtcgctccactggtcgccgatgttgcc 207 |||||||| |||||||||||| ||||||||||| Sbjct: 14058 gaggatgttgctccactggtcaccgatgttgcc 14090 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 175 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 234 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 6739 Query: 235 cttcttcc 242 |||||||| Sbjct: 6740 cttcttcc 6747 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||||||||||| |||||| ||||| || |||||||| ||||| ||||| Sbjct: 7791 tggagagtgcggtctcgtcgacgtcgaacacccagacctccttgccactgccggagagct 7850 Query: 591 tgaggc 596 |||||| Sbjct: 7851 tgaggc 7856 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 33633 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 33692 Query: 591 tgaggc 596 |||||| Sbjct: 33693 tgaggc 33698
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 160 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 219 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 6414 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 6473 Query: 220 cccggcgtcc 229 ||||||||| Sbjct: 6474 gccggcgtcc 6483 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 25708 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 25761 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 26031 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 26090 Query: 591 tgaggc 596 |||||| Sbjct: 26091 tgaggc 26096 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 7253 tggagagcgcggtttcgtcgacgtcgaacacccagatctccttgccgctgccggagagct 7312 Query: 591 tgaggc 596 |||||| Sbjct: 7313 tgaggc 7318
>dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F12, full insert sequence Length = 953 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 503 aagccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacc 562 ||||||||| |||||||||| |||||||||||||| | |||||||||||||||||| ||| Sbjct: 507 aagccgtgcttggcgtagtaggggaggttggagagagaggtctcgtcgatgtcgaacacc 448 Query: 563 cacacgtccttgccgttgccgttgagcttgagg 595 || | |||||||| |||||| |||||||||| Sbjct: 447 cagatctccttgccattgccggcgagcttgagg 415
>dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082K18, full insert sequence Length = 2143 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 503 aagccgtgcgtggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacc 562 ||||||||| |||||||||| |||||||||||||| | |||||||||||||||||| ||| Sbjct: 505 aagccgtgcttggcgtagtaggggaggttggagagagaggtctcgtcgatgtcgaacacc 446 Query: 563 cacacgtccttgccgttgccgttgagcttgagg 595 || | |||||||| |||||| |||||||||| Sbjct: 445 cagatctccttgccattgccggcgagcttgagg 413
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 115 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 174 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 146341 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 146400 Query: 175 gaggatgtcgctccactggtcgccgatgttgcc 207 |||||||| |||||||||||| ||||||||||| Sbjct: 146401 gaggatgttgctccactggtcaccgatgttgcc 146433 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 175 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 234 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 139082 Query: 235 cttcttcc 242 |||||||| Sbjct: 139083 cttcttcc 139090 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 143 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 202 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128 Query: 203 ttgccgac 210 || ||||| Sbjct: 86129 ttaccgac 86136 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 534 agagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagcttga 593 ||||||||||||||||||||||||| ||||| | |||||||| | |||| |||||||| Sbjct: 116532 agagggtggtctcgtcgatgtcgaacacccagatctccttgccatggccggagagcttga 116591 Query: 594 ggc 596 ||| Sbjct: 116592 ggc 116594 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 103316 ggatgtcgttccactggtcgccaatgttgccgacgatga 103354 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||||||||||| |||||| ||||| || |||||||| ||||| ||||| Sbjct: 140134 tggagagtgcggtctcgtcgacgtcgaacacccagacctccttgccactgccggagagct 140193 Query: 591 tgaggc 596 |||||| Sbjct: 140194 tgaggc 140199 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 104571 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 104630 Query: 591 tgaggc 596 |||||| Sbjct: 104631 tgaggc 104636 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 gtcgctccactggtcgccgatgttgccga 209 ||||||||||||||| ||||||||||||| Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 815 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 756 Query: 200 atgttgccga 209 |||||||||| Sbjct: 755 atgttgccga 746 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 408 ggagagggcggtctcgtcgacgtcgaacaccca 376
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 4871437 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 4871496 Query: 200 atgttgccga 209 |||||||||| Sbjct: 4871497 atgttgccga 4871506 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 4872164 ggagagggcggtctcgtcgacgtcgaacaccca 4872196 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 10940657 ggcgtagtaggggaggttggagag 10940680
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 116086 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 116145 Query: 200 atgttgccga 209 |||||||||| Sbjct: 116146 atgttgccga 116155 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 116813 ggagagggcggtctcgtcgacgtcgaacaccca 116845
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 200 atgttgccga 209 |||||||||| Sbjct: 778 atgttgccga 769 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 431 ggagagggcggtctcgtcgacgtcgaacaccca 399
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 837 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 778 Query: 200 atgttgccga 209 |||||||||| Sbjct: 777 atgttgccga 768 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 430 ggagagggcggtctcgtcgacgtcgaacaccca 398
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 200 atgttgccga 209 |||||||||| Sbjct: 778 atgttgccga 769 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 431 ggagagggcggtctcgtcgacgtcgaacaccca 399
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 1051 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 992 Query: 200 atgttgccga 209 |||||||||| Sbjct: 991 atgttgccga 982 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 644 ggagagggcggtctcgtcgacgtcgaacaccca 612
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 200 atgttgccga 209 |||||||||| Sbjct: 778 atgttgccga 769 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 431 ggagagggcggtctcgtcgacgtcgaacaccca 399
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 140 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 199 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 200 atgttgccga 209 |||||||||| Sbjct: 778 atgttgccga 769 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 532 ggagagggtggtctcgtcgatgtcgaagaccca 564 |||||||| ||||||||||| |||||| ||||| Sbjct: 431 ggagagggcggtctcgtcgacgtcgaacaccca 399
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 143 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 202 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968 Query: 203 ttgccgac 210 || ||||| Sbjct: 84969 ttaccgac 84976 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 102156 ggatgtcgttccactggtcgccaatgttgccgacgatga 102194
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 175 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 234 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 701 Query: 235 cttcttcc 242 |||||||| Sbjct: 700 cttcttcc 693 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||| | ||||||||||| |||||| ||||| || |||||||| ||||| ||||| Sbjct: 404 tggagagtgcggtctcgtcgacgtcgaacacccagacctccttgccactgccggagagct 345 Query: 591 tgaggc 596 |||||| Sbjct: 344 tgaggc 339
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 742 ggatgtcgttccactggtcgccaatgttgccgacgatga 704 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 388 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 329 Query: 591 tgaggc 596 |||||| Sbjct: 328 tgaggc 323
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 744 ggatgtcgttccactggtcgccaatgttgccgacgatga 706 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 390 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 331 Query: 591 tgaggc 596 |||||| Sbjct: 330 tgaggc 325
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 750 ggatgtcgttccactggtcgccaatgttgccgacgatga 712 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 396 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 337 Query: 591 tgaggc 596 |||||| Sbjct: 336 tgaggc 331
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 177 ggatgtcgctccactggtcgccgatgttgccgacgatga 215 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 743 ggatgtcgttccactggtcgccaatgttgccgacgatga 705 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| ||| ||||||| |||||| ||||| | ||||||||| ||||| ||||| Sbjct: 389 tggagagggcggtgtcgtcgacgtcgaacacccagatctccttgccggtgccggagagct 330 Query: 591 tgaggc 596 |||||| Sbjct: 329 tgaggc 324
>ref|NM_119070.2| Arabidopsis thaliana acid phosphatase AT4G29260 mRNA, complete cds Length = 1096 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 532 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 491
>gb|BT015481.1| Arabidopsis thaliana At4g29260 mRNA sequence Length = 690 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 260 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 219
>gb|AY091175.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 799 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 338 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 297
>gb|AY050945.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 914 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 349 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 308
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 151152 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 151193 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgt 578 ||||| |||||||| ||||||||| |||||||||||| Sbjct: 152588 gtctcatcgatgtcaaagacccacgcgtccttgccgt 152624
>emb|BX828948.1|CNS0A3HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 360 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 319
>emb|BX828856.1|CNS0A3GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 843 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 333 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 292
>emb|BX828696.1|CNS0A2F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 815 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgttgccg 583 ||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 306 gtctcgtcgatatcgaagatccacacgtccttgccgtcgccg 265
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 428 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 369 Query: 591 tgaggc 596 |||||| Sbjct: 368 tgaggc 363
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 428 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 369 Query: 591 tgaggc 596 |||||| Sbjct: 368 tgaggc 363
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 428 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 369 Query: 591 tgaggc 596 |||||| Sbjct: 368 tgaggc 363
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 428 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 369 Query: 591 tgaggc 596 |||||| Sbjct: 368 tgaggc 363
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 173 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 226 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 396 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 531 tggagagggtggtctcgtcgatgtcgaagacccacacgtccttgccgttgccgttgagct 590 ||||||||| |||||| |||| |||||| ||||| | |||||||| | |||| ||||| Sbjct: 428 tggagagggcggtctcatcgacgtcgaacacccagatctccttgccatggccggagagct 369 Query: 591 tgaggc 596 |||||| Sbjct: 368 tgaggc 363
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccacacgtc 570 ||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||| Sbjct: 2088189 ggcgtagtaggggaggttggagaggagcgtctcgtcgacgtcgaacacccacgcgtc 2088133 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgtcctgcagcttcttc 241 |||||||||||||||||||| Sbjct: 28643928 cggcgtcctgcagcttcttc 28643909
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccacacgtc 570 ||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||| Sbjct: 109051 ggcgtagtaggggaggttggagaggagcgtctcgtcgacgtcgaacacccacgcgtc 108995
>dbj|AK058604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A01, full insert sequence Length = 1313 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagagggtggtctcgtcgatgtcgaagacccacacgtc 570 ||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||| Sbjct: 672 ggcgtagtaggggaggttggagaggagcgtctcgtcgacgtcgaacacccacgcgtc 616
>ref|NM_119071.2| Arabidopsis thaliana acid phosphatase AT4G29270 mRNA, complete cds Length = 937 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgt 578 ||||| |||||||| ||||||||| |||||||||||| Sbjct: 375 gtctcatcgatgtcaaagacccacgcgtccttgccgt 339
>gb|BT015615.1| Arabidopsis thaliana At4g29270 mRNA sequence Length = 693 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgt 578 ||||| |||||||| ||||||||| |||||||||||| Sbjct: 263 gtctcatcgatgtcaaagacccacgcgtccttgccgt 227
>gb|BT004812.1| Arabidopsis thaliana At4g29270 gene, complete cds Length = 771 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgt 578 ||||| |||||||| ||||||||| |||||||||||| Sbjct: 341 gtctcatcgatgtcaaagacccacgcgtccttgccgt 305
>gb|AY084437.1| Arabidopsis thaliana clone 108301 mRNA, complete sequence Length = 885 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 542 gtctcgtcgatgtcgaagacccacacgtccttgccgt 578 ||||| |||||||| ||||||||| |||||||||||| Sbjct: 375 gtctcatcgatgtcaaagacccacgcgtccttgccgt 339
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 gtcgctccactggtcgccgatgttgccg 208 |||||||||||||||||||| ||||||| Sbjct: 12244752 gtcgctccactggtcgccgacgttgccg 12244779 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 579 tgccgttgagcttgaggccgtcga 602 ||||| |||||||||||||||||| Sbjct: 6743999 tgccggtgagcttgaggccgtcga 6744022
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 gtcgctccactggtcgccgatgttgccg 208 |||||||||||||||||||| ||||||| Sbjct: 12241515 gtcgctccactggtcgccgacgttgccg 12241542 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 579 tgccgttgagcttgaggccgtcga 602 ||||| |||||||||||||||||| Sbjct: 6743212 tgccggtgagcttgaggccgtcga 6743235
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 181 gtcgctccactggtcgccgatgttgccg 208 |||||||||||||||||||| ||||||| Sbjct: 94 gtcgctccactggtcgccgacgttgccg 67
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 gtcgctccactggtcgccgatgttgccg 208 |||||||||||||||||||| ||||||| Sbjct: 14285 gtcgctccactggtcgccgacgttgccg 14312
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 189 actggtcgccgatgttgccgacgatgacgtacccg 223 |||||||||||| |||| |||||||| |||||||| Sbjct: 7652446 actggtcgccgaagttggcgacgatgtcgtacccg 7652412
>ref|XM_360398.1| Magnaporthe grisea 70-15 hypothetical protein (MG11032.4) partial mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 580 gccgttgagcttgaggccgtcgacgt 605 |||||||| ||||||||||||||||| Sbjct: 564 gccgttgaccttgaggccgtcgacgt 539
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 172 gccgaggatgtcgctccactggtcgccgatgttg 205 ||||| || ||||||||||||| ||||||||||| Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgttg 663
>ref|XM_369543.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05921.4) partial mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 580 gccgttgagcttgaggccgtcgacgt 605 |||||||| ||||||||||||||||| Sbjct: 564 gccgttgaccttgaggccgtcgacgt 539
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 741 ctggtcgccgatgttggcgacgatg 717
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 750 ctggtcgccgatgttggcgacgatg 726
>emb|AL512452.7| Human DNA sequence from clone RP11-520F22 on chromosome 13, complete sequence Length = 141913 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 agcatggagcttgattattat 71 ||||||||||||||||||||| Sbjct: 19121 agcatggagcttgattattat 19141
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 actggtcgccgatgttgccgacgat 213 ||||||||||||| ||||||||||| Sbjct: 1102884 actggtcgccgatcttgccgacgat 1102908
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 32580474 ctggtcgccgatgttggcgacgatg 32580450
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cctcgggcgcgccgaggatgt 182 ||||||||||||||||||||| Sbjct: 1107157 cctcgggcgcgccgaggatgt 1107137
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 7845 ctggtcgccgatgttggcgacgatg 7821
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 77447 ctggtcgccgatgttggcgacgatg 77423
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 750 ctggtcgccgatgttggcgacgatg 726
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 741 ctggtcgccgatgttggcgacgatg 717
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 2434 ctggtcgccgatgttggcgacgatg 2410
>dbj|AK063040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D05, full insert sequence Length = 613 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 tccttgccgttgccgttgagcttgaggcc 597 |||||||| |||||| ||||||||||||| Sbjct: 453 tccttgcccttgccgatgagcttgaggcc 425
>gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, partial cds Length = 876 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 297 ctggtcgccgatgttgacgacgatg 273
>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ctggtcgccgatgttgccgacgatg 214 |||||||||||||||| |||||||| Sbjct: 733 ctggtcgccgatgttggcgacgatg 709
>ref|XM_478983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gccgcttcgtctccggcagcgccggcgc 447 |||||| |||||||||||||| |||||| Sbjct: 598 gccgctccgtctccggcagcggcggcgc 625
>ref|XM_473513.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 54 ggcgtagtaggggaggttggagag 31
>ref|NM_183670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 195 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 54 ggcgtagtaggggaggttggagag 31
>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene, alternative splice products, complete cds; and pseudogene, complete sequence Length = 185775 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ttgagtagcttgtagtagag 420 |||||||||||||||||||| Sbjct: 149708 ttgagtagcttgtagtagag 149689
>emb|AL049761.11|HSDJ863C7 Human DNA sequence from clone RP5-863C7 on chromosome 20p12.3-13 Contains the CSNK2A1 gene for casein kinase 2 alpha 1 polypeptide (EC 2.7.1.37), the 5' end of the C20orf140 gene for a novel protein similar to Drosophila CG17883 and a CpG island, complete sequence Length = 108653 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tggggtcaggcagcttgaag 151 |||||||||||||||||||| Sbjct: 105909 tggggtcaggcagcttgaag 105928
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cgccctcgggcgcgccgagg 178 |||||||||||||||||||| Sbjct: 22180 cgccctcgggcgcgccgagg 22199
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 566 acgtccttgccgttgccgttgagcttgaggccgtcg 601 |||| |||| || |||||||||| |||||||||||| Sbjct: 13787 acgttcttggcgctgccgttgaggttgaggccgtcg 13822
>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide synthetase gene cluster, partial sequence Length = 28890 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 ctccagcacgtacgcgtcgaagct 477 |||||||||| ||||||||||||| Sbjct: 24613 ctccagcacggacgcgtcgaagct 24590 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 ctccagcacgtacgcgtcgaagct 477 |||||||||| ||||||||||||| Sbjct: 1363 ctccagcacggacgcgtcgaagct 1340
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 579 tgccgttgagcttgaggccgtcga 602 ||||| |||||||||||||||||| Sbjct: 80746 tgccggtgagcttgaggccgtcga 80723
>gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143738 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ttgagtagcttgtagtagag 420 |||||||||||||||||||| Sbjct: 119647 ttgagtagcttgtagtagag 119666
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 28254169 ggcgtagtaggggaggttggagag 28254146 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cgccctcgggcgcgccgagg 178 |||||||||||||||||||| Sbjct: 9689974 cgccctcgggcgcgccgagg 9689993
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcctgcagcttcttcctctc 246 |||||||||||||||||||| Sbjct: 280157 tcctgcagcttcttcctctc 280176
>gb|L20214.1|XELASH3A Xenopus laevis achaete-scute homologous protein mRNA, complete cds Length = 591 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gagccgcttcgtctccggcagcgc 441 ||||||||||||||| |||||||| Sbjct: 209 gagccgcttcgtctctggcagcgc 186
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 127673 ggcgtagtaggggaggttggagag 127696
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 43499 ggcgtagtaggggaggttggagag 43522
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 ccggcagcgccggcgcgctcccct 455 ||||||||||||||||||| |||| Sbjct: 931212 ccggcagcgccggcgcgctgccct 931235
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cgccctcgggcgcgccgagg 178 |||||||||||||||||||| Sbjct: 1123697 cgccctcgggcgcgccgagg 1123678
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgtcctgcagcttcttc 241 |||||||||||||||||||| Sbjct: 135406 cggcgtcctgcagcttcttc 135387
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgtcctgcagcttcttc 241 |||||||||||||||||||| Sbjct: 44494 cggcgtcctgcagcttcttc 44475
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gccgcttcgtctccggcagcgccggcgc 447 |||||| |||||||||||||| |||||| Sbjct: 57648 gccgctccgtctccggcagcggcggcgc 57675
>dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051M04, full insert sequence Length = 3065 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgcagcttcttcctctc 246 |||||||||||||||||||| Sbjct: 606 tcctgcagcttcttcctctc 587
>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full insert sequence Length = 3183 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgcagcttcttcctctc 246 |||||||||||||||||||| Sbjct: 721 tcctgcagcttcttcctctc 702
>tpe|BN000621.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx92 gene for class III peroxidase 92 precursor, exons 1-3 Length = 1183 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cggcgtcctgcagcttcttc 241 |||||||||||||||||||| Sbjct: 825 cggcgtcctgcagcttcttc 844
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gtacgcgtcgaagctcgtcg 482 |||||||||||||||||||| Sbjct: 582832 gtacgcgtcgaagctcgtcg 582851
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gaacaccggcttgatgccca 398 |||||||||||||||||||| Sbjct: 2923973 gaacaccggcttgatgccca 2923992
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcctgcagcttcttcctctc 246 |||||||||||||||||||| Sbjct: 280157 tcctgcagcttcttcctctc 280176
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ccggcgtcctgcagcttctt 240 |||||||||||||||||||| Sbjct: 1980897 ccggcgtcctgcagcttctt 1980916
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ggcgtagtaagggaggttggagag 537 ||||||||| |||||||||||||| Sbjct: 46477 ggcgtagtaggggaggttggagag 46454
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcctgcagcttcttcctctc 246 |||||||||||||||||||| Sbjct: 13208 tcctgcagcttcttcctctc 13227
>gb|U09768.1|XLU09768 Xenopus laevis achaete-scute homolog 3a mRNA, complete cds Length = 746 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gagccgcttcgtctccggcagcgc 441 ||||||||||||||| |||||||| Sbjct: 225 gagccgcttcgtctctggcagcgc 202
>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete sequences Length = 57000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tagtaaatggggtcaggcag 144 |||||||||||||||||||| Sbjct: 40125 tagtaaatggggtcaggcag 40106 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,628,955 Number of Sequences: 3902068 Number of extensions: 3628955 Number of successful extensions: 69396 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67415 Number of HSP's gapped (non-prelim): 1978 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)