>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  216 bits (551), Expect = 4e-56
 Identities = 111/142 (78%), Positives = 121/142 (85%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIVS DLSV+NLVIVKKG+NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR+Y
Sbjct: 99  VRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKY 158

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           VNTYRR+FTNKKGKT SKAPKIQRLVTPLT+Q                KSEAAEYQKLLA
Sbjct: 159 VNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLA 218

Query: 328 QRLKEQRDRRSESMAKRRSKLS 263
            RLKEQRDRRSES+AK+RS+LS
Sbjct: 219 SRLKEQRDRRSESLAKKRSRLS 240

>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  215 bits (547), Expect = 1e-55
 Identities = 109/142 (76%), Positives = 121/142 (85%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIVS DLSV+NLVIVKKG +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR+Y
Sbjct: 99  VRGCIVSPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKY 158

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           VNTYRR+FTNKKGK VSKAPKIQRLVTPLT+Q                 S+AA+YQKLLA
Sbjct: 159 VNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLA 218

Query: 328 QRLKEQRDRRSESMAKRRSKLS 263
            RLKEQRDRRSES+AK+RS+LS
Sbjct: 219 SRLKEQRDRRSESLAKKRSRLS 240

>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  214 bits (544), Expect = 3e-55
 Identities = 109/142 (76%), Positives = 119/142 (83%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIVS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR Y
Sbjct: 99  VRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTY 158

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           VNTYRR FTNKKGK VSKAPKIQRLVTPLT+Q                 S+AA+YQKLLA
Sbjct: 159 VNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLA 218

Query: 328 QRLKEQRDRRSESMAKRRSKLS 263
            RLKEQRDRRSES+AK+RS+LS
Sbjct: 219 SRLKEQRDRRSESLAKKRSRLS 240

>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score =  166 bits (419), Expect = 8e-41
 Identities = 92/142 (64%), Positives = 106/142 (74%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIVS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGP+   + + L+   K+DDVR+Y
Sbjct: 54  VRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALYF--KEDDVRKY 111

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           VNT     T  KG   SKAPKIQRLVTPLT+Q                KSEAAEYQKLLA
Sbjct: 112 VNTTAEFTTKWKG---SKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLA 168

Query: 328 QRLKEQRDRRSESMAKRRSKLS 263
            RLKEQR++RSES+AK+RS+LS
Sbjct: 169 SRLKEQREKRSESLAKKRSRLS 190

>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  147 bits (372), Expect = 2e-35
 Identities = 79/138 (57%), Positives = 97/138 (70%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVI++KG+ D+PGLTD+  PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T +  K  +KAPKIQRLVTP  +Q                K EAAEY KLLA
Sbjct: 157 V--VRRPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLA 214

Query: 328 QRLKEQRDRRSESMAKRR 275
           +RLKE +++R E +AKRR
Sbjct: 215 KRLKEAKEKRQEKIAKRR 232

>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  147 bits (371), Expect = 3e-35
 Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V    R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLL
Sbjct: 157 V---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLL 213

Query: 331 AQRLKEQRDRRSESMAKRR 275
           A+R+KE +++R E +AKRR
Sbjct: 214 AKRMKEAKEKRQEQIAKRR 232

>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  147 bits (371), Expect = 3e-35
 Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V    R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLL
Sbjct: 157 V---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLL 213

Query: 331 AQRLKEQRDRRSESMAKRR 275
           A+R+KE +++R E +AKRR
Sbjct: 214 AKRMKEAKEKRQEQIAKRR 232

>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  147 bits (371), Expect = 3e-35
 Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V    R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLL
Sbjct: 157 V---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLL 213

Query: 331 AQRLKEQRDRRSESMAKRR 275
           A+R+KE +++R E +AKRR
Sbjct: 214 AKRMKEAKEKRQEQIAKRR 232

>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  146 bits (368), Expect = 7e-35
 Identities = 81/139 (58%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V    R   NK+GK   +KAPKIQRLVTP  +Q                K EAA+Y KLL
Sbjct: 157 V---VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLL 213

Query: 331 AQRLKEQRDRRSESMAKRR 275
           A+R+KE +++R E +AKRR
Sbjct: 214 AKRMKEAKEKRQEQIAKRR 232

>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  144 bits (363), Expect = 3e-34
 Identities = 77/138 (55%), Positives = 96/138 (69%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCI   +LSV+NLVI+KKG+ D+PGLTD+  PR  GPKRASKI+KLFNL K+DDVRQY
Sbjct: 97  VRGCIGDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T +  K  +KAP+IQRLVTP  +Q                K EA+EY KLLA
Sbjct: 157 V--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLA 214

Query: 328 QRLKEQRDRRSESMAKRR 275
           +R+KE +++R E +AKRR
Sbjct: 215 KRMKEAKEKRQEQIAKRR 232

>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  141 bits (355), Expect = 2e-33
 Identities = 76/138 (55%), Positives = 94/138 (68%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVIV+KG+ D+PGLTD   PR  GPKRAS+I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   R+    +  K  +KAPKIQRLVTP  +Q                K EA+EY KLLA
Sbjct: 157 V--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLA 214

Query: 328 QRLKEQRDRRSESMAKRR 275
           +R KE +++R E +AKRR
Sbjct: 215 KRSKEAKEKRQEQIAKRR 232

>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score =  137 bits (346), Expect = 2e-32
 Identities = 77/142 (54%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV++LVI+KKG+ D+PGLTD   PR  GPKRASKI+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDSNLSVLSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V   RR    + GK   SKAPKIQRLVTP+ +Q                + + AEY KLL
Sbjct: 157 V--VRRPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLL 214

Query: 331 AQRLKEQRDRRSE-SMAKRRSK 269
           AQR+KE ++R+ E   +  RSK
Sbjct: 215 AQRMKEAKERKMERKRSNSRSK 236

>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score =  132 bits (331), Expect = 1e-30
 Identities = 76/140 (54%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+NLVI+KKG+ D+PGLTDT  PR  GPKRA +I+KLFNL K+DDVRQY
Sbjct: 97  VRGCIVDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTVS-KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V   RR    K+GK    K PKIQRL+TP  +Q                + E A Y KLL
Sbjct: 157 V--VRRPLPQKEGKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRRYAKQREEEATYAKLL 214

Query: 331 AQRLKEQRDRRSESMAKRRS 272
           A+R KE+R    E+ AKRRS
Sbjct: 215 AKRKKEER----EAHAKRRS 230

>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score =  130 bits (326), Expect = 5e-30
 Identities = 75/143 (52%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+ LVIV+KG+ ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR+Y
Sbjct: 97  VRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 156

Query: 508 VNTYRRSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQ 341
           V   +     K+GK  +    KAPKIQRLVTP+ +Q                KS  A+Y 
Sbjct: 157 V--VKALLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEADYA 214

Query: 340 KLLAQRLKEQRDRRSESMAKRRS 272
           KLLAQR KE + RR E + +RRS
Sbjct: 215 KLLAQRKKESKVRRQEEIKRRRS 237

>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score =  129 bits (325), Expect = 6e-30
 Identities = 71/141 (50%), Positives = 90/141 (63%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIVS DLSV+++VIVK+G  D+ GLT    PR  GPKRA+ I+KLF L K+DDVRQY
Sbjct: 97  VRGCIVSSDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T K GKT +KAPKIQRL+TP  +                 K  AAEY +LLA
Sbjct: 157 V--IRREVTTKSGKTYTKAPKIQRLITPRRLAHKAQLREKKVKAIQASKDAAAEYAQLLA 214

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +R+ E++  ++E   +R S L
Sbjct: 215 KRVAEKKSEKAEEKKRRASSL 235

>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score =  129 bits (324), Expect = 8e-30
 Identities = 74/143 (51%), Positives = 92/143 (64%), Gaps = 4/143 (2%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  +LSV+ LVIV+KG+ ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR+Y
Sbjct: 97  VRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 156

Query: 508 VNTYRRSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQ 341
           V   +R    K+GK  +    KAPKIQRLVTP+ +Q                K    +Y 
Sbjct: 157 V--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKQSENDYA 214

Query: 340 KLLAQRLKEQRDRRSESMAKRRS 272
           KLLAQR KE + RR E + +RRS
Sbjct: 215 KLLAQRKKESKVRRQEELKRRRS 237

>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score =  128 bits (321), Expect = 2e-29
 Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  ++SV+ LV++KKG+ D+PGLTDT  PR  GPKRASKI+KL+NL K+DDVR++
Sbjct: 97  VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156

Query: 508 VNTYRRSFTNKKG-KTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V   RR    K   K  SKAPKIQRL+TP+ +Q                K  +A+Y KLL
Sbjct: 157 V--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLL 214

Query: 331 AQRLKEQRDRRSESMAKRRSKL 266
            QR KE + +R E+  +R + +
Sbjct: 215 VQRKKESKAKREEAKRRRSASI 236

>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score =  127 bits (320), Expect = 2e-29
 Identities = 70/143 (48%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV QDL+V+ L I+K+G+ D+PGLTD   P+  GPKRASKI++ FNL K+DDVRQ+
Sbjct: 97  VRGCIVGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQF 156

Query: 508 VNTYRRSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKL 335
           V   RR    KK   K  +KAPKIQRLVTP T+Q                + EAAE+ +L
Sbjct: 157 V--IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQL 214

Query: 334 LAQRLKEQRDRRSESMAKRRSKL 266
           +A+R+ E + +R    A+R S L
Sbjct: 215 MAKRVAEAKQKREVVKARRASSL 237

>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score =  126 bits (316), Expect = 7e-29
 Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV QDL+V+ L IVK+G+ D+PGLTD   P+  GPKRASKI++ FNL K+DDVRQ+
Sbjct: 97  VRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQF 156

Query: 508 VNTYRRSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKL 335
           V   RR    KK   K  +KAPKIQRLVTP T+Q                + EAAE+ +L
Sbjct: 157 V--IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQL 214

Query: 334 LAQRLKEQRDRRSESMAKRRSKL 266
           +A+R+ E + ++    A+R S +
Sbjct: 215 MAKRVAEAKQKKEVVKARRASSM 237

>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score =  124 bits (311), Expect = 3e-28
 Identities = 68/143 (47%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV Q+LS + L++VKKG+ D+PGLTDT  PR  GPKRAS I+KL+NL K+DDVRQ+
Sbjct: 97  VRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQF 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V   +R    K GK   +KAPKIQRL+TP+ +Q                K   AEY K+L
Sbjct: 157 V--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214

Query: 331 AQRLKEQRDRRSESMAKRRSKLS 263
             R +++R RR   ++  R   S
Sbjct: 215 HLRRRQERIRRRSRLSSMRDSRS 237

>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score =  123 bits (309), Expect = 5e-28
 Identities = 70/141 (49%), Positives = 90/141 (63%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV+QDL+V+ L +VK+G +D+ GLTDT  P+  GPKRA+ I+K F L K+DDVRQ+
Sbjct: 97  VRGCIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQF 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR    K  K  +KAPKIQRLVTP T+Q                +  AAEY +LLA
Sbjct: 157 V--VRREVV-KGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           QRL E++  R+E   +R S L
Sbjct: 214 QRLHERKAERAEIKKRRASSL 234

>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score =  121 bits (303), Expect = 2e-27
 Identities = 68/143 (47%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV Q+LS + L++VKKG+ D+PGLTDT   R  GPKRAS I+KL+NL K+DDVRQY
Sbjct: 97  VRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQY 156

Query: 508 VNTYRRSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLL 332
           V   +R    K GK   +KAPKIQRL+TP+ +Q                K   AEY K+L
Sbjct: 157 V--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214

Query: 331 AQRLKEQRDRRSESMAKRRSKLS 263
             R +++R RR   ++  R   S
Sbjct: 215 HLRRRQERIRRRSRLSSMRDSRS 237

>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score =  119 bits (297), Expect = 1e-26
 Identities = 69/141 (48%), Positives = 88/141 (62%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IV  DL+V+ LVIVKKG+ +L GLTDT  P+  GPKRA+ I+K F L K+DDVR +
Sbjct: 97  VRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDF 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA
Sbjct: 157 V--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +RL E++  ++E   +R S L
Sbjct: 214 KRLSERKAEKAEIRKRRASSL 234

>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score =  118 bits (295), Expect = 2e-26
 Identities = 68/142 (47%), Positives = 90/142 (63%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGCIV  ++S ++LVIVKKG  ++ GLTD+  PR  GPKRASKI+KLFNL K DDV +Y
Sbjct: 97  VRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V T+ ++F +   KT+  APKIQRL+TP  I                 + +AA Y KLLA
Sbjct: 157 VITHDKTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLA 214

Query: 328 QRLKEQRDRRSESMAKRRSKLS 263
           +  KE+ D +   +A+RRS  S
Sbjct: 215 KYSKEEHDAK---IARRRSSAS 233

>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score =  116 bits (290), Expect = 7e-26
 Identities = 67/141 (47%), Positives = 89/141 (63%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IV  DL+V++LVIVKKG+ +L G+TD   P+  GPKRA+ I+K F L K+DDVR +
Sbjct: 97  VRGAIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDF 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA
Sbjct: 157 V--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +RL E++  ++E+  +R S L
Sbjct: 214 KRLAERKAEKAETRKRRASSL 234

>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score =  110 bits (276), Expect = 3e-24
 Identities = 63/141 (44%), Positives = 86/141 (60%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IV  DL+V+ L+I KKG+ ++ G+T+   P+  GPKRA+ I+K F L K+DDVR Y
Sbjct: 97  VRGAIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T K  K+ +KAPKIQRLVTP  +Q                +  AAEY +LLA
Sbjct: 157 V--IRREVT-KGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +RL E++  ++E   +R S L
Sbjct: 214 KRLSERKAEKAEVRKRRASSL 234

>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score =  110 bits (275), Expect = 4e-24
 Identities = 63/141 (44%), Positives = 84/141 (59%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IV  DL+V+ L+I KKG  ++ G+T+   P+  GPKRA+ I+K F L KDDDVR +
Sbjct: 97  VRGAIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDF 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR    K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA
Sbjct: 157 V--IRREVV-KGDKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +RL E++  ++E   +R S L
Sbjct: 214 KRLTEKKAEKAEERKRRASSL 234

>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score =  108 bits (270), Expect = 2e-23
 Identities = 67/141 (47%), Positives = 85/141 (60%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IV  DL+V+ LVIVKKG  ++ G+T+   P+  GPKRA+ I+K F L K+DDVR Y
Sbjct: 97  VRGAIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDY 156

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA
Sbjct: 157 V--IRREVT-KGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLA 213

Query: 328 QRLKEQRDRRSESMAKRRSKL 266
           +RL E   R++E   +R S L
Sbjct: 214 KRLAE---RKAEVRKRRASSL 231

>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGC+++ D++++N+ I K G   + G+TDT  PR  GPKRASKI+KLFNL + +DVR+Y
Sbjct: 100 VRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKY 159

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR       K   KAPKIQRL+TP                     +E  EY +L+A
Sbjct: 160 V--VRRRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIA 217

Query: 328 --QRLKEQRDRRSESMAK 281
             +R   QRD   +   K
Sbjct: 218 SNRRALRQRDHSKKHTRK 235

>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRGC+++ D++++N+ I K G   + G+TDT  PR  GPKRASKI+KLFNL + +DVR+Y
Sbjct: 100 VRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKY 159

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA 329
           V   RR       K   KAPKIQRL+TP                     +E  EY +L+A
Sbjct: 160 V--VRRRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIA 217

Query: 328 --QRLKEQRDRRSESMAK 281
             +R   QRD   +   K
Sbjct: 218 SNRRALRQRDHSKKHTQK 235

>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6|
          Length = 203

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 27/83 (32%), Positives = 48/83 (57%)
 Frame = -1

Query: 688 VRGCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQY 509
           VRG IVS+++ V+NL+I++ G+ ++ GLT+        P++  K++K+F  G  D+ +  
Sbjct: 82  VRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMF--GVPDEEKNV 139

Query: 508 VNTYRRSFTNKKGKTVSKAPKIQ 440
           V  Y R+    +     K PKI+
Sbjct: 140 VG-YIRNILKSECDDPKKIPKIR 161

>YBK7_YEAST (P38162) Protein YBL107C|
          Length = 196

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 622 NDLPGLTDTEKPRMR--GPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 467
           ND P LT     R R   P       +    G DD +RQ +N YR+   N K K
Sbjct: 23  NDEPSLTTITVTRERCVDPSLIDSFLRFLRHGSDDIIRQKLNNYRKGSINGKNK 76

>DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11.21)|
          Length = 470

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = -1

Query: 667 QDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKI---KKLFNLGKDDDVRQYVNTY 497
           +DLSV  LVIVK G+     L D +KP +  P  A  +   +  F    + ++R  + T+
Sbjct: 130 RDLSVAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTETELRPILETF 189

Query: 496 RRSFTNKKGKTVS 458
             +  N   K  S
Sbjct: 190 AAAGINAPQKPES 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,153,345
Number of Sequences: 219361
Number of extensions: 1440992
Number of successful extensions: 4371
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4336
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)