>Y2307_ARCFU (O27977) Hypothetical protein AF2307|
          Length = 365

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -1

Query: 170 PEVPRQQVISVCDRLICRCVERKE 99
           PE+ R+++IS+C+ L  RC+ER E
Sbjct: 340 PEISREEIISLCEEL-SRCLERNE 362

>YMP2_CAEEL (Q10946) Hypothetical protein B0361.2|
          Length = 460

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 44  SQHIHRQKHKGFGSFALDF---PSFLHTGKSGDHKPKLLA 154
           ++ + RQ  KGF  FA+DF     F H  +S DH P   A
Sbjct: 369 TKDLRRQIPKGFSYFAVDFGLSNGFAHVIESHDHFPSTFA 408

>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
           transcription factor NFAT1) (NFAT pre-existing subunit)
           (NF-ATp)
          Length = 925

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
 Frame = +1

Query: 223 CHGRRSPAPRL--------SQRRRGCASGIPCLVPPGHDDARLAATADHMPSH 357
           C GR SP PR         ++RR  CA  +  L PPG    R  + +    SH
Sbjct: 231 CLGRHSPVPRPASRSSSPGAKRRHSCAEALVAL-PPGASPQRSRSPSPQPSSH 282

>GLND_XANCP (Q8PAU4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 229 GRRSPAPRLSQRRRGCASGIPCLVPPGHDDARLAATADHMPSHDHRRARP 378
           G   P PR  + R    S    +   GHDDA +      MP  +  R RP
Sbjct: 610 GLEHPPPREERLREARESARTLMQAQGHDDATIDRQFAGMPDENFLRFRP 659

>GLND_XANC8 (Q4USS0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 229 GRRSPAPRLSQRRRGCASGIPCLVPPGHDDARLAATADHMPSHDHRRARP 378
           G   P PR  + R    S    +   GHDDA +      MP  +  R RP
Sbjct: 610 GLEHPPPREERLREARESARTLMQAQGHDDATIDRQFAGMPDENFLRFRP 659

>MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING finger protein|
           63)
          Length = 507

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 192 AATALHSPRGSTA---ASNFGL*SPDLPVCRKEGKSSA 88
           A +  H   G+ A   A+  G+  PDLPVC   G+S+A
Sbjct: 6   APSEAHEAAGAQAGAEAAREGVSGPDLPVCEPSGESAA 43

>GLND_XANOR (Q5H1D3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 229 GRRSPAPRLSQRRRGCASGIPCLVPPGHDDARLAATADHMPSHDHRRARP 378
           G   P PR  + R    S    +   GHDDA +      MP  +  R RP
Sbjct: 610 GVEHPPPREERLREARESARALMQAQGHDDATIDRQFAGMPDENFLRFRP 659

>GLND_XANOM (Q2P497) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 229 GRRSPAPRLSQRRRGCASGIPCLVPPGHDDARLAATADHMPSHDHRRARP 378
           G   P PR  + R    S    +   GHDDA +      MP  +  R RP
Sbjct: 610 GVEHPPPREERLREARESARALMQAQGHDDATIDRQFAGMPDENFLRFRP 659

>AMA1_PLAFF (P22621) Apical membrane antigen 1 precursor (Merozoite surface|
           antigen)
          Length = 622

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 143 SVCDRLICRCVERKENQVQTNQIPCVSAY 57
           S C+  +C+CVER+      N++     Y
Sbjct: 500 STCNFFVCKCVERRAEVTSNNEVVVKEEY 528


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,501,236
Number of Sequences: 219361
Number of extensions: 732931
Number of successful extensions: 1918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)