Clone Information

BLAST Search Result

Clone Name	rbags29h11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL7A_ORYSA (P35685) 60S ribosomal protein L7a	241	1e-63
2	RL7A_ARATH (P49692) 60S ribosomal protein L7a	233	3e-61
3	RL7A_DROME (P46223) 60S ribosomal protein L7a	166	2e-49
4	RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a	152	4e-45
5	RL7A_RAT (P62425) 60S ribosomal protein L7a	154	9e-45
6	RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus pro...	154	9e-45
7	RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus pro...	154	9e-45
8	RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus pro...	152	2e-44
9	RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)	148	2e-44
10	RL7A_CHICK (P32429) 60S ribosomal protein L7a	151	2e-43
11	RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (Y...	141	1e-41
12	RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (Y...	141	2e-41
13	RL7A_ANOGA (O76732) 60S ribosomal protein L7a	151	3e-40
14	RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a	127	2e-36
15	RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)	113	2e-31
16	RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae	59	1e-08
17	RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae	59	1e-08
18	RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae	59	1e-08
19	RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae	58	2e-08
20	RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae	58	2e-08
21	RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae	58	2e-08
22	RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae	58	2e-08
23	RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae	57	5e-08
24	RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae	56	7e-08
25	RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae	55	2e-07
26	RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae	54	4e-07
27	RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae	54	5e-07
28	RL7A_METTH (O26355) 50S ribosomal protein L7Ae	52	1e-06
29	RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae	52	1e-06
30	RL7A_SULSO (P55858) 50S ribosomal protein L7Ae	52	1e-06
31	RL7A_METJA (P54066) 50S ribosomal protein L7Ae	51	2e-06
32	NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like ...	51	2e-06
33	NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-lik...	51	2e-06
34	NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-lik...	51	2e-06
35	RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae	51	3e-06
36	NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)	51	3e-06
37	NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog	48	3e-05
38	RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae	44	3e-04
39	NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H...	44	3e-04
40	NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (...	44	4e-04
41	NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex su...	44	5e-04
42	NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-l...	44	5e-04
43	RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae	43	6e-04
44	NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-l...	43	8e-04
45	NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H...	42	0.001
46	NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-l...	42	0.001
47	NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-l...	42	0.001
48	NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-l...	42	0.001
49	SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein	42	0.002
50	NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (...	42	0.002
51	NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (...	40	0.004
52	NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex su...	40	0.004
53	NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (...	40	0.005
54	NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-l...	40	0.007
55	NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-l...	39	0.009
56	PARP1_CHICK (P26446) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	33	0.49
57	PARP1_RAT (P27008) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) ...	32	1.1
58	RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1	31	2.4
59	GUNA_BUTFI (P22541) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	30	4.2
60	DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060	30	4.2
61	CFAI_HUMAN (P05156) Complement factor I precursor (EC 3.4.21.45)...	30	5.4
62	PARP1_CRIGR (Q9R152) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	30	7.1
63	PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	29	9.3
64	PARP1_MOUSE (P11103) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30...	29	9.3
65	MFD_HAEIN (P45128) Transcription-repair coupling factor (EC 3.6....	29	9.3
66	LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (L...	29	9.3

>RL7A_ORYSA (P35685) 60S ribosomal protein L7a|
          Length = 258

 Score =  241 bits (615), Expect = 1e-63
 Identities = 120/125 (96%), Positives = 123/125 (98%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK+RLGSIVHKKTAS
Sbjct: 133 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTAS 192

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
           VLCLTTVKNEDKLEFSKILEAIKANFN KFDEVR KWGGGVMGSKSQAKTKARE+L+AKE
Sbjct: 193 VLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKE 252

Query: 96  AAQRM 82
           AAQRM
Sbjct: 253 AAQRM 257



 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 52/63 (82%), Positives = 53/63 (84%)
 Frame = -3

Query: 604 LATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGF*PCHLPY*AEQ 425
           LATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKTVEAKKPIVVKYG    H+ Y  EQ
Sbjct: 84  LATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGL--NHVTYLIEQ 141

Query: 424 GSA 416
             A
Sbjct: 142 SKA 144

to top

>RL7A_ARATH (P49692) 60S ribosomal protein L7a|
          Length = 257

 Score =  233 bits (594), Expect = 3e-61
 Identities = 113/126 (89%), Positives = 122/126 (96%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           NHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG++VH+KTAS
Sbjct: 132 NHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAS 191

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            LCLTTVKNEDKLEFSKILEAIKANFN K++E R KWGGG+MGSKSQAKTKA+ER+IAKE
Sbjct: 192 CLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKE 251

Query: 96  AAQRMN 79
           AAQRMN
Sbjct: 252 AAQRMN 257



 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = -3

Query: 604 LATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGF*PCHLPY*AEQ 425
           LAT+LFK+LLKYRPEDK AKKERL+K+AQAEAEGK  E+KKPIVVKYG    H+ Y  EQ
Sbjct: 83  LATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGL--NHVTYLIEQ 140

Query: 424 GSA 416
             A
Sbjct: 141 NKA 143

to top

>RL7A_DROME (P46223) 60S ribosomal protein L7a|
          Length = 271

 Score =  166 bits (421), Expect(2) = 2e-49
 Identities = 80/125 (64%), Positives = 98/125 (78%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N VT LIEQ KAQLVVIAHDVDP+ELV++LPALCRKM VPYCIVKGK+RLG +V +KT 
Sbjct: 145 TNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTC 204

Query: 279 SVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAK 100
           + L LTTV N DK  F K+LEA+K NFN + +E+R  WGGG++GSKS A+    ER  A+
Sbjct: 205 TTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKAR 264

Query: 99  EAAQR 85
           E AQ+
Sbjct: 265 ELAQK 269



 Score = 48.9 bits (115), Expect(2) = 2e-49
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKK 482
           A  LFK+L KYRPE  +AKK RL K A+A+A+GK VE KK
Sbjct: 97  AVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKK 136

to top

>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a|
          Length = 265

 Score =  152 bits (385), Expect(2) = 4e-45
 Identities = 71/125 (56%), Positives = 93/125 (74%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG +VH+KT +
Sbjct: 140 NTVTSLVESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLGRLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +C T    ED+   +K++EAIK N+N +++E+R  WGG +MG KS A+    E+   KE
Sbjct: 200 SVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKSTARIAKLEKAKGKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 48.5 bits (114), Expect(2) = 4e-45
 Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT LFK+  KYRPE K  KK RLL RA+ +A GK  V  K+P VV+ G
Sbjct: 91  ATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVPTKRPPVVRAG 138

to top

>RL7A_RAT (P62425) 60S ribosomal protein L7a|
          Length = 265

 Score =  154 bits (389), Expect(2) = 9e-45
 Identities = 73/125 (58%), Positives = 95/125 (76%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT +
Sbjct: 140 NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +  T V +EDK   +K++EAI+ N+N ++DE+R  WGG V+G KS A+    E+  AKE
Sbjct: 200 TVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 45.8 bits (107), Expect(2) = 9e-45
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+P V++ G
Sbjct: 91  ATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAG 138

to top

>RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  154 bits (389), Expect(2) = 9e-45
 Identities = 73/125 (58%), Positives = 95/125 (76%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT +
Sbjct: 140 NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +  T V +EDK   +K++EAI+ N+N ++DE+R  WGG V+G KS A+    E+  AKE
Sbjct: 200 TVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 45.8 bits (107), Expect(2) = 9e-45
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+P V++ G
Sbjct: 91  ATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAG 138

to top

>RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X|
           polypeptide)
          Length = 265

 Score =  154 bits (389), Expect(2) = 9e-45
 Identities = 73/125 (58%), Positives = 95/125 (76%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT +
Sbjct: 140 NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +  T V +EDK   +K++EAI+ N+N ++DE+R  WGG V+G KS A+    E+  AKE
Sbjct: 200 TVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 45.8 bits (107), Expect(2) = 9e-45
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+P V++ G
Sbjct: 91  ATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAG 138

to top

>RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  152 bits (385), Expect(2) = 2e-44
 Identities = 71/125 (56%), Positives = 94/125 (75%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N +T L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG +VH+KT +
Sbjct: 140 NTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +  T    EDK   +K++EAIK N+N +++E+R  WGGG++G KS A+    E+  AKE
Sbjct: 200 SVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKSTARINKLEKAKAKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 46.2 bits (108), Expect(2) = 2e-44
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT LFK+  KYRPE K  KK+RLL RA+ +A GK     K+P V++ G
Sbjct: 91  ATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAG 138

to top

>RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)|
          Length = 258

 Score =  148 bits (373), Expect(2) = 2e-44
 Identities = 71/118 (60%), Positives = 91/118 (77%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           NHV  LIE  KA+LV+IA DVDPIELVV+LPALC+KM VPY IVK K+RLG+++H+KTA+
Sbjct: 136 NHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIHQKTAA 195

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIA 103
           VL +T V+ EDK E + I+ A+ ANF+ K+DE R KWGGG+MG K+QA    R +  A
Sbjct: 196 VLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQALLAKRAKAAA 253



 Score = 50.8 bits (120), Expect(2) = 2e-44
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE--AKKPIVVKYG 461
           AT +FK+L KYRPE    KK+RL+  A+A A GK+ +  +KKP  VKYG
Sbjct: 86  ATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNVKYG 134

to top

>RL7A_CHICK (P32429) 60S ribosomal protein L7a|
          Length = 265

 Score =  151 bits (381), Expect(2) = 2e-43
 Identities = 72/125 (57%), Positives = 93/125 (74%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+K K+RLG +VH+KT +
Sbjct: 140 NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVHRKTCT 199

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            +  T V  EDK   +K++EA+K N+N ++DE+R  WGG V+G KS A+    E+  AKE
Sbjct: 200 CVAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKE 259

Query: 96  AAQRM 82
            A ++
Sbjct: 260 LATKL 264



 Score = 44.3 bits (103), Expect(2) = 2e-43
 Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT L K+  KYRPE K  KK+RLL RA+ +A GK     K+P V++ G
Sbjct: 91  ATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAG 138

to top

>RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6)|
           (Maintenance of killer protein 7)
          Length = 255

 Score =  141 bits (356), Expect(2) = 1e-41
 Identities = 67/115 (58%), Positives = 91/115 (79%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           NHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY IVKGK+RLG++V++KT++
Sbjct: 136 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLGTLVNQKTSA 195

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARER 112
           V  LT V+ ED+   +K++  I ANF  K+DEV+  WGGG++G+K+QAK   R +
Sbjct: 196 VAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDKRAK 250



 Score = 48.1 bits (113), Expect(2) = 1e-41
 Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE--AKKPIVVKYG 461
           A   FK+  KYRPE    KKERL K A A AEGK+ +  + KP  VKYG
Sbjct: 86  AAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYG 134

to top

>RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6)|
          Length = 255

 Score =  141 bits (355), Expect(2) = 2e-41
 Identities = 66/115 (57%), Positives = 91/115 (79%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           NHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY I+KGK+RLG++V++KT++
Sbjct: 136 NHVVSLIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIIKGKARLGTLVNQKTSA 195

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARER 112
           V  LT V+ ED+   +K++  I ANF  K+DEV+  WGGG++G+K+QAK   R +
Sbjct: 196 VAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDKRAK 250



 Score = 47.8 bits (112), Expect(2) = 2e-41
 Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE--AKKPIVVKYG 461
           A   FK+  KYRPE    KKERL K A A AEGK+ +  + KP  VKYG
Sbjct: 86  AAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYG 134

to top

>RL7A_ANOGA (O76732) 60S ribosomal protein L7a|
          Length = 271

 Score =  151 bits (382), Expect(2) = 3e-40
 Identities = 69/124 (55%), Positives = 94/124 (75%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N V  ++EQ KAQLV+IAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG++V++KT +
Sbjct: 147 NSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCT 206

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            + LT  +N DK   +K++E IK NFN +FD++R  WGGG++G KS A+    E+   +E
Sbjct: 207 CVALTQFENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKKRE 266

Query: 96  AAQR 85
             Q+
Sbjct: 267 MLQK 270



 Score = 33.5 bits (75), Expect(2) = 3e-40
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK 500
           A  + K   KYRPE+ +A+ +RL  +A+A+A GK
Sbjct: 98  AQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGK 131

to top

>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a|
          Length = 264

 Score =  127 bits (319), Expect(2) = 2e-36
 Identities = 59/120 (49%), Positives = 85/120 (70%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N +T L+E  +AQLV+IAHDV+P+E+V+ LPALCRK  VPY I+KGK+ LG++V +KT +
Sbjct: 141 NTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRRKTTA 200

Query: 276 VLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVMGSKSQAKTKARERLIAKE 97
            + L  V  EDK   +K++E +  NF+ + +E+R  WGGGVM +KS AK    ER  A++
Sbjct: 201 AVALVDVNPEDKSALNKLVETVNNNFSERHEEIRKHWGGGVMSAKSDAKKLKIERARARD 260



 Score = 45.1 bits (105), Expect(2) = 2e-36
 Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE-AKKPIVVKYG 461
           A   FK+L KYRPE   AKK RL  RA+A A GK  E  K+P  V++G
Sbjct: 92  ARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHG 139

to top

>RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)|
          Length = 132

 Score =  113 bits (282), Expect(2) = 2e-31
 Identities = 54/81 (66%), Positives = 66/81 (81%)
 Frame = -1

Query: 456 NHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTAS 277
           N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH+KT +
Sbjct: 52  NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCT 111

Query: 276 VLCLTTVKNEDKLEFSKILEA 214
            +  T V +EDK   +K++EA
Sbjct: 112 TVAFTQVNSEDKGALAKLVEA 132



 Score = 42.7 bits (99), Expect(2) = 2e-31
 Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = -3

Query: 601 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYG 461
           AT L K+  KYRPE K  KK+RLL RA+ +A  K  V  K+P V++ G
Sbjct: 3   ATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAG 50

to top

>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHKK 286
           +N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +   
Sbjct: 36  TNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVA 95

Query: 285 TASVLCLTTVKNEDKLE 235
            ASV  +   K  D +E
Sbjct: 96  AASVAIIEPGKARDLVE 112

to top

>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHKK 286
           +N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +   
Sbjct: 36  TNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVA 95

Query: 285 TASVLCLTTVKNEDKLE 235
            ASV  +   K  D +E
Sbjct: 96  AASVAIIEPGKARDLVE 112

to top

>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHKK 286
           +N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+   +   
Sbjct: 36  TNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVA 95

Query: 285 TASVLCLTTVKNEDKLE 235
            ASV  +   K  D +E
Sbjct: 96  AASVAIIEPGKARDLVE 112

to top

>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH-KKT 283
           +N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V     
Sbjct: 35  TNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVGIASA 94

Query: 282 ASVLCLTTVKNEDKLEFSKILEAIK 208
           ASV  +   KNE+   +  I+ A++
Sbjct: 95  ASVSIVDYGKNEEL--YKSIVSAVE 117

to top

>RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG-SIVHKKT 283
           +N V   IE+ +++LVVIA DV P E+V +LP LC + +VPY  VK KS LG  +     
Sbjct: 34  TNEVVKSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDLGLKVGIASA 93

Query: 282 ASVLCLTTVKNED 244
           ASV  +   KN+D
Sbjct: 94  ASVSIVDYGKNDD 106

to top

>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH-KKT 283
           +N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V     
Sbjct: 35  TNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVGIASA 94

Query: 282 ASVLCLTTVKNED 244
           ASV  +   KNE+
Sbjct: 95  ASVSIVDYGKNEE 107

to top

>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae|
          Length = 119

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 32/84 (38%), Positives = 44/84 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+  A+LV IA DVDP E+V  LP LC +  VPY  VK K+ LG  V  +  
Sbjct: 32  TNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVP 91

Query: 279 SVLCLTTVKNEDKLEFSKILEAIK 208
                   + E + E   ++E IK
Sbjct: 92  CASAAIINEGELRKELGSLVEKIK 115

to top

>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 30/84 (35%), Positives = 46/84 (54%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+  A+LVVIA DVDP E+V+ LP LC + ++PY  V  K RLG     + A
Sbjct: 36  TNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGIEVA 95

Query: 279 SVLCLTTVKNEDKLEFSKILEAIK 208
           +         + +    +I+E +K
Sbjct: 96  AASVAIIEPGDAETLVREIVEKVK 119

to top

>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 301
           +N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 36  TNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGA 88

to top

>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae|
          Length = 151

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 51/99 (51%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+  A+LV+IA DVDP E+V  LP LC + +VPY  V  K +LG       +
Sbjct: 51  TNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGINVS 110

Query: 279 SVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWG 163
           +   +     +   E    LEA+ +    K +EVR K G
Sbjct: 111 AAAAVVIEPGQAAGE----LEALVS----KINEVRAKHG 141

to top

>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae|
          Length = 125

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHKK 286
           +N  T  +E+ +A+LV+IA +V+P E+V+ LPALC +  VPY  V  K  LG    ++  
Sbjct: 37  TNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKAAGINVS 96

Query: 285 TASVLCLTTVKNEDKLE 235
            AS   +   + +D LE
Sbjct: 97  AASAAIIDAGEAKDLLE 113

to top

>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 304
           +N  T  +E+S+A+LVVIA DV P E+V  LP LC + ++PY  V  K  LG
Sbjct: 36  TNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLG 87

to top

>RL7A_METTH (O26355) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI--VHKK 286
           +N VT  +E+  AQLV+IA DV+P E+V  LP L  + E+PY  +  K  LG+   ++  
Sbjct: 36  TNEVTKAVERGVAQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGAAAGLNVG 95

Query: 285 TASVLCLTTVKNEDKLEFSKILEAIK 208
           TAS   +     ED ++  +I+E ++
Sbjct: 96  TASSAIVEAGDAEDLIK--EIIEKVE 119

to top

>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 28/84 (33%), Positives = 44/84 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+ +A+LVVIA DV P E+V  LP LC + ++PY  V  K  LG     + A
Sbjct: 36  TNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGLQVA 95

Query: 279 SVLCLTTVKNEDKLEFSKILEAIK 208
           +         E K    +I++ ++
Sbjct: 96  AASAAIIDPGEAKDLLDEIVKRVE 119

to top

>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 43/83 (51%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+ +A+LV+IA DV P E+V  LP LC + ++PY  V  K  LG     + A
Sbjct: 36  TNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVA 95

Query: 279 SVLCLTTVKNEDKLEFSKILEAI 211
           +         E K    +I++ +
Sbjct: 96  TASAAILEPGEAKDLVDEIIKRV 118

to top

>RL7A_METJA (P54066) 50S ribosomal protein L7Ae|
          Length = 117

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 30/80 (37%), Positives = 42/80 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N VT  +E+  A+LV+IA DV P E+V  LP LC +  +PY  V  K  LG     + A
Sbjct: 31  ANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGLEVA 90

Query: 279 SVLCLTTVKNEDKLEFSKIL 220
           +      + NE   E  K+L
Sbjct: 91  A--SSVAIINEGDAEELKVL 108

to top

>NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27)
          Length = 127

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG        
Sbjct: 38  ANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97

Query: 279 SVLCLTTVKNEDKLE 235
            + C  T+K   +L+
Sbjct: 98  VIACSVTIKEGSQLK 112

to top

>NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (Sperm-specific antigen 1) (Fertilization
           antigen 1) (FA-1)
          Length = 127

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG        
Sbjct: 38  ANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97

Query: 279 SVLCLTTVKNEDKLE 235
            + C  T+K   +L+
Sbjct: 98  VIACSVTIKEGSQLK 112

to top

>NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27) (hSNU13)
          Length = 127

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG        
Sbjct: 38  ANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97

Query: 279 SVLCLTTVKNEDKLE 235
            + C  T+K   +L+
Sbjct: 98  VIACSVTIKEGSQLK 112

to top

>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 43/84 (51%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  +E+ +A LV+IA DVDP E+V  LP LC +  +PY  V  K  LG+      A
Sbjct: 36  TNETTKAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGAAAGIDVA 95

Query: 279 SVLCLTTVKNEDKLEFSKILEAIK 208
           +         + K    +I+E ++
Sbjct: 96  AASACIIDPGDAKDLVDEIIEKVE 119

to top

>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)|
          Length = 127

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  + +  A +VV+A D +PIE+++ LP LC    VPY  V+ K  LG        
Sbjct: 38  ANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97

Query: 279 SVLCLTTVKNEDKLE 235
            V C  T     +L+
Sbjct: 98  IVACSVTTNEGSQLK 112

to top

>NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog|
          Length = 128

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTA 280
           +N  T  + +  ++++V+A D +P+E+++ LP LC    VPY  V+ K+ LG      T 
Sbjct: 39  ANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRAC-GVTR 97

Query: 279 SVLCLTTVKNED---KLEFSKILEAIK 208
            V+  +  +NE    K +  KI E ++
Sbjct: 98  PVIAASITQNEGSQLKSQIQKIKEDVE 124

to top

>RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 301
           +N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 34  TNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIFIKNQKELGA 86

to top

>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2)
          Length = 156

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSI-VHKKTASV 274
           V   + + +  LVVIA D+ P +++  +P LC    VPY  +  K  LG+    K+  SV
Sbjct: 63  VVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPTSV 122

Query: 273 LCLTTVKNEDKLEFSKILEAIKANFNXKFDEVR 175
           + +    N+ K   +K  E  K +FN    EV+
Sbjct: 123 VFIVPGSNKKKDGKNK-EEEYKESFNEVVKEVQ 154

to top

>NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 22/82 (26%), Positives = 40/82 (48%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   + + +  ++V+A D  PIE+   LP LC    +PY  +  K+ LG+    K  + +
Sbjct: 67  VQKFVNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCV 126

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            +     E +  + K LE ++A
Sbjct: 127 IMVKPHEEYQETYDKCLEEVQA 148

to top

>NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 17/77 (22%), Positives = 42/77 (54%)
 Frame = -1

Query: 438 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVLCLTT 259
           + +++  + ++A +V PI++   +P +C + E+PY  +  + +LG  V  +  S+L    
Sbjct: 80  LRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRPSILIFVK 139

Query: 258 VKNEDKLEFSKILEAIK 208
              + K  + ++ EA++
Sbjct: 140 PSGDFKELYDEVAEALR 156

to top

>NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 159

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   I++ +  +V+IA D  PIE+   LP +C   ++PYC V  K  LG     K  +  
Sbjct: 73  VQKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPT-C 131

Query: 270 CLTTVKNE 247
           C+    NE
Sbjct: 132 CVLLKPNE 139

to top

>RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 301
           +N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 34  TNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKNQKDLGA 86

to top

>NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 160

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 19/78 (24%), Positives = 41/78 (52%)
 Frame = -1

Query: 438 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVLCLTT 259
           + + +  + + A DV P++++  LPA+C +  +PY     ++ LG+ +  K  +V  L  
Sbjct: 78  LRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYAYTPSRADLGAAMGVKRGTVALLVR 137

Query: 258 VKNEDKLEFSKILEAIKA 205
             +E K  + ++ E + A
Sbjct: 138 QNDEYKDLYDEVKEELSA 155

to top

>NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2) (P17-nhp2)
          Length = 154

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/91 (27%), Positives = 43/91 (47%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   + + +  LV++A D+ P++++  +P LC    VPY     K  LG   + K  +  
Sbjct: 61  VVKAVRKGEKGLVILAGDISPMDVISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPT-S 119

Query: 270 CLTTVKNEDKLEFSKILEAIKANFNXKFDEV 178
           C+  V    K + SK+ E  K ++     EV
Sbjct: 120 CVMIVPGGKKKDMSKV-EEYKESYEEIIKEV 149

to top

>NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
           (H/ACA snoRNP protein NHP2)
          Length = 160

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/78 (24%), Positives = 40/78 (51%)
 Frame = -1

Query: 438 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVLCLTT 259
           + + +  + + A DV P++++  LPA+C +  +PY     ++ LG+ +  K  +V  L  
Sbjct: 78  LRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVR 137

Query: 258 VKNEDKLEFSKILEAIKA 205
              E K  + ++ E + A
Sbjct: 138 QNEEYKDLYDEVKEELSA 155

to top

>NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+    K  + +
Sbjct: 63  VQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCV 122

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            L     + +  + + LE ++A
Sbjct: 123 ILIKPHEDYQEAYDECLEDVQA 144

to top

>NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+    K  + +
Sbjct: 63  VQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCV 122

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            L     + +  + + LE ++A
Sbjct: 123 ILIKPHEDYQEAYDECLEDVQA 144

to top

>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein|
          Length = 126

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = -1

Query: 459 SNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 304
           +N  T  + +  ++ +++A D +PIE+++ LP LC    VPY  V  +  LG
Sbjct: 37  ANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88

to top

>NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 21/82 (25%), Positives = 40/82 (48%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   I + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K  + +
Sbjct: 67  VQKFINKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCV 126

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            +     E +  + + LE ++A
Sbjct: 127 IMVKPHEEYQEAYDECLEEVQA 148

to top

>NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/82 (23%), Positives = 41/82 (50%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   + + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K  + +
Sbjct: 67  VQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCV 126

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            +    +E +  + + LE +++
Sbjct: 127 IMVKPHDEYQEAYDECLEEVQS 148

to top

>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 16/76 (21%), Positives = 41/76 (53%)
 Frame = -1

Query: 438 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVLCLTT 259
           + +++  + ++A +V PI++   +PA+C + E+PY  +  + +LG  V  +  S+L    
Sbjct: 80  LRKNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLGLAVGHRRPSILIFVK 139

Query: 258 VKNEDKLEFSKILEAI 211
              + +  + ++ E +
Sbjct: 140 PSADFQELYDEVAETL 155

to top

>NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 19/82 (23%), Positives = 40/82 (48%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   + + +  ++V+A D  PIE+   LP +C    +PY  +  K+ LG+    K  + +
Sbjct: 67  VQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCV 126

Query: 270 CLTTVKNEDKLEFSKILEAIKA 205
            +     E +  + + LE +++
Sbjct: 127 IMVKPHEEYQEAYDECLEEVQS 148

to top

>NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
          Length = 150

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 22/80 (27%), Positives = 37/80 (46%)
 Frame = -1

Query: 450 VTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVL 271
           V   I + +  +VV A D  PI++   LP +C    +PY  V  K  LGS    K  + +
Sbjct: 64  VQKFINKGETGIVVFAGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKRPTCV 123

Query: 270 CLTTVKNEDKLEFSKILEAI 211
            +    +E K  + + +E +
Sbjct: 124 IMIKPHDEYKEAYDECVEEV 143

to top

>NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nhp2-like protein)
          Length = 156

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 23/88 (26%), Positives = 41/88 (46%)
 Frame = -1

Query: 438 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVHKKTASVLCLTT 259
           I + +  L VIA ++ PI+++  LP LC +  VPY  V  K  L      K  +   L  
Sbjct: 62  IRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLVM 121

Query: 258 VKNEDKLEFSKILEAIKANFNXKFDEVR 175
           +K       ++ L  +K ++    D+++
Sbjct: 122 LKPAKGDLTAEELAKLKTDYEQVSDDIK 149

to top

>PARP1_CHICK (P26446) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1011

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 24/85 (28%), Positives = 36/85 (42%)
 Frame = -1

Query: 339 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGG 160
           P C V  ++ LG +       +L  + +K EDK    K L A K     K +EV     G
Sbjct: 160 PDCFVSRRAELGFLPAYGATQLLGFSILKAEDKETLKKQLPATKTEGKRKGEEV----DG 215

Query: 159 GVMGSKSQAKTKARERLIAKEAAQR 85
            V+  K   K K +E    K+  ++
Sbjct: 216 NVVAKKKSRKEKEKESKQEKQLKEQ 240

to top

>PARP1_RAT (P27008) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1013

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = -1

Query: 339 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEV------ 178
           P C VK +  LG       + +   + +  EDK    K L A+K+    K DEV      
Sbjct: 159 PTCFVKNRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAVKSEGKRKCDEVDGIDEV 218

Query: 177 ---RXKWGGGVMGSKSQAKTKARERLI 106
              + K G     SK +   KA+  L+
Sbjct: 219 AKKKSKKGKDKESSKLEKALKAQNELV 245

to top

>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1|
          Length = 144

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 441 LIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 304
           LIE+  AQLVV+A D +  + V  + ALC   EV    V     LG
Sbjct: 54  LIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLG 99

to top

>GUNA_BUTFI (P22541) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGA)
          Length = 429

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/27 (48%), Positives = 22/27 (81%)
 Frame = -3

Query: 586 KMLLKYRPEDKVAKKERLLKRAQAEAE 506
           K+++K + +D+ AKKE+ LK+A+ EAE
Sbjct: 60  KLVIKEKKQDESAKKEQELKKAKEEAE 86

to top

>DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060|
          Length = 383

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 255 KNEDKLEFSKILEAIKANFNXKFDEVRXKWGGGVM-GSKSQ 136
           K E K EF K LE IK++FN +++    KW  G   GS S+
Sbjct: 14  KLESKSEFDKELEKIKSSFNEEYE----KWSSGKQRGSSSK 50

to top

>CFAI_HUMAN (P05156) Complement factor I precursor (EC 3.4.21.45) (C3B/C4B|
           inactivator) [Contains: Complement factor I heavy chain;
           Complement factor I light chain]
          Length = 583

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 310 PWIDCSQEDCLCSVPHHCEERGQA 239
           PW  C +  C+C +P+ C + G A
Sbjct: 50  PWQRCIEGTCVCKLPYQCPKNGTA 73

to top

>PARP1_CRIGR (Q9R152) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1012

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = -1

Query: 339 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGG 160
           P C VK +  LG       + +   + +  EDK    K L  +K+    K DEV    G 
Sbjct: 159 PTCFVKNREELGFRPEYSASQLKGFSLLSAEDKEVLKKQLPGVKSEGKRKGDEVD---GA 215

Query: 159 GVMGSKSQAKTKARERLIAK 100
             +  K   K K ++  + K
Sbjct: 216 DEVAKKKSKKGKDKDSKLEK 235

to top

>PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1013

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = -1

Query: 339 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGG 160
           P C VK +  LG       + +   + +  EDK    K L  +K+    K DEV    G 
Sbjct: 159 PGCFVKNREELGFRPEYSASQLKGFSLLATEDKEALKKQLPGVKSEGKRKGDEVD---GV 215

Query: 159 GVMGSKSQAKTKARERLIAK 100
             +  K   K K ++  + K
Sbjct: 216 DEVAKKKSKKEKDKDSKLEK 235

to top

>PARP1_MOUSE (P11103) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1) (msPARP)
          Length = 1012

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = -1

Query: 339 PYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNXKFDEVRXKWGG 160
           P C VK +  LG       + +   + +  EDK    K L AIK     K DEV      
Sbjct: 159 PTCFVKKRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAIKNEGKRKGDEVD----- 213

Query: 159 GVMGSKSQAKTKARE 115
              G+   AK K+R+
Sbjct: 214 ---GTDEVAKKKSRK 225

to top

>MFD_HAEIN (P45128) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)|
            (ATP-dependent helicase mfd)
          Length = 1146

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = +1

Query: 61   HINLGLVHPLRSLLGDEPFPXXXXXXXXXAHDTTTPLXPDLIELXIEVRLDSLQDLAEL- 237
            H  L  +H LR  +G              A+  T P  P ++    E RLD+L++L  L 
Sbjct: 892  HFGLAQLHQLRGRVG-------RSHHQAYAYLLTPP--PKMMTKDAERRLDALENLDNLG 942

Query: 238  -KLVLVLHSGEAQNRGSLLVNNRS 306
               +L  H  E +  G LL N +S
Sbjct: 943  AGFILATHDLEIRGAGELLGNEQS 966

to top

>LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (La autoantigen|
           homolog)
          Length = 275

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 589 FKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPI 476
           F  + KYRP DKV +  R  +  +  A+G+ V+ + P+
Sbjct: 71  FNRMKKYRPVDKVIEALRSSEILEVSADGENVKRRVPL 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,679,175
Number of Sequences: 219361
Number of extensions: 1254879
Number of successful extensions: 3917
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 3823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3917
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result