ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1j20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 535 bits (270), Expect = e-149 Identities = 367/400 (91%), Gaps = 8/400 (2%) Strand = Plus / Minus Query: 27 acacattgttgcctcgattctttcctctccaccgaccaacccacgtatgcatgcacaaaa 86 ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| || Sbjct: 1094 acacattgttgcctcgattgtttcctctccaccgatcaacccacgtacgcatgcacacaa 1035 Query: 87 gat--gagtatcttcacttctgctatgctctagttagactcgagctgcgcgtaccacaca 144 ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1034 gataggatcttcttcacttctgctctgctctagttagactcgagctgcgcgtaccacaca 975 Query: 145 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 204 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 974 ccctggatcttgacatccttgggcgcct------cgaggtcggtgtctgacggctgcacg 921 Query: 205 ctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcacgctgagggtg 264 |||||||||||||| |||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 920 ctctcgaagacgccgatcacctcgccggtctccggcttgctcttggtgacgctgagcgtg 861 Query: 265 atgttgcccgtggaggaggacccnttcttcacgttctccttggccagctcctcctcgtct 324 ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 860 atgttgcccgtggaggaggacgcgttcttcacgttctccttggccaactcctcctcgtct 801 Query: 325 cctctgcctccggcgggcagagccaccgcgttgtcgtagccagtagagccaccacggccc 384 |||||||||||| ||| || || | ||||||||||||||||||||||||||||||||| Sbjct: 800 cctctgcctccgcggggtagcgcaccggcgttgtcgtagccagtagagccaccacggccc 741 Query: 385 tttgggtcgaggaaagaggaacccctgtagctgggcacga 424 ||||||||||||||||| |||||||||||||||||||||| Sbjct: 740 tttgggtcgaggaaagacgaacccctgtagctgggcacga 701
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 940 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 880 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 821 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 820 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 761 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 760 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 701 Query: 422 cga 424 ||| Sbjct: 700 cga 698
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 17346516 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 17346457 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 17346456 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 17346397 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 17346396 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 17346337 Query: 422 cga 424 ||| Sbjct: 17346336 cga 17346334
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 112777 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 112718 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 112717 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 112658 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 112657 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 112598 Query: 422 cga 424 ||| Sbjct: 112597 cga 112595
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 945 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 886 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 885 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 826 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 825 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 766 Query: 422 cga 424 ||| Sbjct: 765 cga 763
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 833 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 832 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 773 Query: 422 cga 424 ||| Sbjct: 772 cga 770
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 833 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 832 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 773 Query: 422 cga 424 ||| Sbjct: 772 cga 770
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 422 cga 424 ||| Sbjct: 769 cga 767
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 810 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 809 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 750 Query: 422 cga 424 ||| Sbjct: 749 cga 747
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 810 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 809 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 750 Query: 422 cga 424 ||| Sbjct: 749 cga 747
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 422 cga 424 ||| Sbjct: 769 cga 767
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 992 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 932 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 873 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 872 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 813 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 812 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 753 Query: 422 cga 424 ||| Sbjct: 752 cga 750
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 954 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 895 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 894 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 835 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 834 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 775 Query: 422 cga 424 ||| Sbjct: 774 cga 772
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 355 bits (179), Expect = 7e-95 Identities = 271/303 (89%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||| ||||| |||||||||||||||||||||||||| |||||||| | ||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | |||||||||||||| || || || | ||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| || |||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| ||||||||||| |||||||||||||||||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 422 cga 424 ||| Sbjct: 769 cga 767
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 216 bits (109), Expect = 4e-53 Identities = 251/303 (82%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 181 |||||||||| |||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263 Query: 182 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggct 241 |||||||||| |||||||||||||||||||||||||| || ||||| | |||||||| | Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203 Query: 242 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacccnttcttcacgttct 301 |||||||||| ||||| | ||||||||||| |||||||||| | ||||| | ||||| Sbjct: 1202 tgctcttggtgacgctcaacgtgatgttgccggtggaggaggcggcgttcttgatgttct 1143 Query: 302 ccttggccagctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgt 361 |||| |||||||||||||| |||||| |||| | || || |||||||||| Sbjct: 1142 ccttctggagctcctcctcgtcacctctgnnnnnggcgtcgtgcgcgacggcgttgtcgt 1083 Query: 362 agccagtagagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggca 421 |||| || ||||| || |||||||| ||||||||||| ||||| || | ||||||||||| Sbjct: 1082 agccggtggagccgccgcggcccttggggtcgaggaaggaggagccacggtagctgggca 1023 Query: 422 cga 424 ||| Sbjct: 1022 cga 1020
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 916 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 857 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 856 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 813 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 575 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 516 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 515 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 472 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 728 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 669 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 668 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 610
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 830 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 771 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 770 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 727 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 875 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 816 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 815 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 772 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1028 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 969 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 968 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 910
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 830 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 771 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 770 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 727 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 864 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 805 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 804 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 761 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 870 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 811 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 810 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 767 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1023 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 964 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 963 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 905
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 864 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 805 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 804 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 761 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 864 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 805 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 804 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 761 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 862 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 803 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 802 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 759 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Minus Query: 205 ctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 1246 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 1187 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 1186 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 1143 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1399 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1340 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 1339 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 1281
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 855 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 796 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 795 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 752 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1008 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 949 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 948 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 890
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 846 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 787 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 786 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/119 (81%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || |||| ||| || || ||| Sbjct: 999 taccacaccccttggatcttcacatcctttggtaccttagcaccgaagtcagtatccgac 940 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 939 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 881
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 916 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 857 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 856 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 813 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 58871 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 58812 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 58811 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 58768 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 59024 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 58965 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 58964 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 58906
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 1247 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 1188 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 1187 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 1144 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/119 (81%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| ||||| ||| Sbjct: 1400 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtgtccgac 1341 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 1340 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctcttagtcac 1282
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 863 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 804 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 803 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 760 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1016 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 957 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 956 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||||||||| | |||||||||||||||||||| ||||| || |||| || Sbjct: 846 ttctttacgttctccttctcaagctcctcctcgtctcctctccctccagcaggcaatgca 787 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtcgaggaaagaggaaccc 408 || |||||||| ||||||||||| ||||| || ||||||||||| ||||| || ||||| Sbjct: 786 acagcgttgtcatagccagtagatccaccccgtccctttgggtcaaggaaggatgaacct 727 Query: 409 ctgta 413 ||||| Sbjct: 726 ctgta 722
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 942 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 883 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 882 actgcattatcgtacccagtggatccaccacgaccctttgggtc 839
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 569 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 510 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 509 actgcattatcgtacccagtggatccaccacgaccctttgggtc 466
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 39814 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 39873 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 39874 actgcattatcgtacccagtggatccaccacgaccctttgggtc 39917
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 827 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 768 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 767 actgcattatcgtacccagtggatccaccacgaccctttgggtc 724
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||| ||||| | |||||||||||||||||||||||||| || |||| ||| Sbjct: 866 ttcttcacgttttcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 807 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||||||||||||||| Sbjct: 806 acggcgttgtcatatcctgtggatccaccacggccctttgggtc 763 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/119 (80%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1019 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 960 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||||||| || || |||||||| | ||||||||||||||||| ||||| Sbjct: 959 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 901
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 885 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 826 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 825 actgcattatcgtacccagtggatccaccacgaccctttgggtc 782
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 833 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 774 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 773 actgcattatcgtacccagtggatccaccacgaccctttgggtc 730
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 394 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 335 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 334 actgcattatcgtacccagtggatccaccacgaccctttgggtc 291
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 942 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 883 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 882 actgcattatcgtacccagtggatccaccacgaccctttgggtc 839
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| |||| Sbjct: 863 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagcc 804 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 803 actgcattatcgtacccagtggatccaccacgaccctttgggtc 760
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 91.7 bits (46), Expect = 2e-15 Identities = 213/270 (78%) Strand = Plus / Minus Query: 144 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 203 |||||| || || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctgaattttcacatccttgggaacctttgcaccgagatcagtatcagatggctggat 932 Query: 204 gctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcacgctgagggt 263 |||||| || || || || ||||| | ||||| |||||||||| ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgctctgggtaacactcagggt 872 Query: 264 gatgttgcccgtggaggaggacccnttcttcacgttctccttggccagctcctcctcgtc 323 ||| || || || || || || ||||| ||||||||||| |||||||||||||| Sbjct: 871 gatctttcctgtagaagatgaagtattctttacgttctccttctgaagctcctcctcgtc 812 Query: 324 tcctctgcctccggcgggcagagccaccgcgttgtcgtagccagtagagccaccacggcc 383 |||||| ||||| || |||| || || |||||||| ||||||||||| ||||| || || Sbjct: 811 tcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccaccccgtcc 752 Query: 384 ctttgggtcgaggaaagaggaacccctgta 413 ||||||||| ||||| || ||||| ||||| Sbjct: 751 ctttgggtcaaggaaggatgaacctctgta 722
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||||||||| | ||||||||||| |||||||| ||||| || |||| || Sbjct: 840 ttctttacgttctccttctcaagctcctcctcatctcctctccctccagcaggcaatgca 781 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtcgaggaaagaggaaccc 408 || |||||||| ||||||||||| ||||| || ||||||||||| ||||| || ||||| Sbjct: 780 acagcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacct 721 Query: 409 ctgta 413 ||||| Sbjct: 720 ctgta 716
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||| ||||||||||| |||||||||||||||||||| ||||| || |||| || Sbjct: 845 ttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgca 786 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtcgaggaaagaggaaccc 408 || |||||||| ||||||||||| ||||| || ||||||||||| ||||| || ||||| Sbjct: 785 acagcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacct 726 Query: 409 ctgta 413 ||||| Sbjct: 725 ctgta 721 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 accctggatcttgacatccttggg 167 ||||||||| |||||||||||||| Sbjct: 990 accctggattttgacatccttggg 967
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 83.8 bits (42), Expect = 4e-13 Identities = 53/57 (92%) Strand = Plus / Minus Query: 126 gagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccgag 182 |||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| Sbjct: 86 gagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttngcgccgag 30
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 83.8 bits (42), Expect = 4e-13 Identities = 170/214 (79%) Strand = Plus / Minus Query: 145 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 204 |||||||||||||||||||| || |||| || || | || ||||| || || |||| | Sbjct: 980 ccctggatcttgacatccttagggacctttgctcccaaatcagtgtcagatggttgcagg 921 Query: 205 ctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcacgctgagggtg 264 |||||||| || || || ||||| | ||||| |||||||||||||| || | |||||| Sbjct: 920 ctctcgaacactccaataacctctccggtctcaggcttgctcttggtgacacccagggtg 861 Query: 265 atgttgcccgtggaggaggacccnttcttcacgttctccttggccagctcctcctcgtct 324 || || || || || || || ||||| | ||||||||||| ||||||||||| ||| Sbjct: 860 attttcccagttgacgatgatgtgttcttgatgttctccttggtgagctcctcctcatct 801 Query: 325 cctctgcctccggcgggcagagccaccgcgttgt 358 ||||||||||| || ||||| |||||||| |||| Sbjct: 800 cctctgcctcccgcaggcagtgccaccgcattgt 767
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggc-gggcagagc 347 ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| || || ||| Sbjct: 849 ttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggtcaaagc 790 Query: 348 caccgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 ||| || || ||||| ||||| || |||||||| ||||||||||| Sbjct: 789 cactgcattatcgtacccagtggatccaccacgaccctttgggtc 745
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 79.8 bits (40), Expect = 7e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||| ||||||||||||||||| || |||| || Sbjct: 894 ttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctccagctggcaatgca 835 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || || || |||||||| ||||||||||| Sbjct: 834 acggcgttgtcatatcctgtggatccaccacgaccctttgggtc 791 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/119 (79%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1047 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatcagac 988 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 ||||| | |||| ||| || || ||||| || | |||||||| |||||||||||||| Sbjct: 987 ggctgaagactctggaacactccgatcacttctcctgtctccggtttgctcttggtcac 929
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 336 ggcgggcagagccaccgcgttgtcgtagccagtagagccaccacggccctttgggtcgag 395 ||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| || Sbjct: 687 ggcgggcagagccacggcgttgtcgtagccggtcgagccaccgcggcccttggggtccag 628 Query: 396 gaa 398 ||| Sbjct: 627 gaa 625 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 160 tccttgggcgccttggcgccgaggtcggtgtctgacggctg 200 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 857 tccttgggggccttggcgcccaggtcagtgtccgagggctg 817
>emb|X13826.1|CROEE1 C.reinhardtii psb1 mRNA for OEE1 protein of photosystem II (oxygen-evolving enhancer protein) Length = 1714 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 336 ggcgggcagagccaccgcgttgtcgtagccagtagagccaccacggccctttgggtcgag 395 ||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| || Sbjct: 819 ggcgggcagagccacggcgttgtcgtagccggtcgagccaccgcggcccttggggtccag 760 Query: 396 gaa 398 ||| Sbjct: 759 gaa 757
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggcagagcc 348 ||||||||||||||||| | |||||||| ||||||||||||||||| || |||| || Sbjct: 885 ttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctccagctggcaatgca 826 Query: 349 accgcgttgtcgtagccagtagagccaccacggccctttgggtc 392 || |||||||| || || | || |||||||| ||||||||||| Sbjct: 825 acggcgttgtcatatcctgaggatccaccacgaccctttgggtc 782 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/119 (79%) Strand = Plus / Minus Query: 136 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 195 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1038 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatccgac 979 Query: 196 ggctgcacgctctcgaagacgcctatcacctcnncngtctccggcttgctcttggtcac 254 || || | |||||||| || || ||||| || | |||||||| |||||||||||||| Sbjct: 978 gggtgaagactctcgaacactccgatcacttctcctgtctccggtttgctcttggtcac 920
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 69.9 bits (35), Expect = 6e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 310 agctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgtagccagta 369 ||||||||||| || ||||| ||||| ||||| || ||||| || |||||||| || | | Sbjct: 836 agctcctcctcatcacctctacctccagcggggagtgccacggcattgtcgtaaccggca 777 Query: 370 gagccaccacggccctttgggtcgaggaaagaggaacccctgtagctgggcacga 424 || || || | |||||||||||| ||||| || ||||||| |||||| ||||||| Sbjct: 776 gatcctcccctgccctttgggtcaaggaacgacgaaccccggtagctcggcacga 722
>emb|X05548.1|SOPS33 Spinach mRNA for 33kDA precursor protein (associated with photosynthetic water oxidation complex) Length = 1153 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 313 tcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgtagccagtagag 372 ||||||||||||||||| || ||||| |||| || || |||||||| || || || || Sbjct: 849 tcctcctcgtctcctctcccaccggcaggcaacgcaacagcgttgtcatacccggtggac 790 Query: 373 ccaccacggccctttgggtcgaggaaagagga 404 ||||| |||||||||||||| ||||| ||||| Sbjct: 789 ccacctcggccctttgggtcaaggaacgagga 758
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 63.9 bits (32), Expect = 4e-07 Identities = 110/137 (80%) Strand = Plus / Plus Query: 121 gactcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccg 180 ||||||||||| || ||||| || ||||||||||| |||||||| || || || || || Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623 Query: 181 aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcnncngtctccggc 240 | || ||||| |||||||| | ||||||||| || || |||||||| | || || ||| Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683 Query: 241 ttgctcttggtcacgct 257 ||||||| |||||||| Sbjct: 66684 ttgctctgtgtcacgct 66700 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 121 gactcgagctgcgcgtaccacacaccctggatcttgacatcctt 164 ||||| ||||| || ||||| || ||||||||||| |||||||| Sbjct: 55661 gactcaagctgagcataccaaactccctggatcttcacatcctt 55704
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 310 agctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgtagccagta 369 ||||||||||| |||||||||||||| || |||| || || || |||||||| ||||| Sbjct: 842 agctcctcctcatctcctctgcctccagctggcaatgcaacagcattgtcgtaaccagtg 783 Query: 370 gagccaccacggccctttgggtcgaggaaagaggaacccctgtag 414 || ||||| | ||| |||||||| || || || ||||| |||||| Sbjct: 782 gatccacccctgccttttgggtcaagaaacgatgaacctctgtag 738
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 289 ttcttcacgttctccttggccagctcctcctcgtctcctctgcct 333 ||||||||||||||||| | |||||||| ||||||||||||||| Sbjct: 835 ttcttcacgttctcctttgagagctcctcttcgtctcctctgcct 791
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 310 agctcctcctcgtctcctctgcctccggcgggcagagccaccgcgttgtcgtagccagta 369 ||||||||||| |||||||||||||| || |||| || || || ||||| || ||||| Sbjct: 806 agctcctcctcatctcctctgcctccagctggcaatgcaacagcattgtcataaccagtg 747 Query: 370 gagccaccacggccctttgggtcgaggaaagaggaacccctgta 413 || ||||| | |||||||||||| || || || ||||| ||||| Sbjct: 746 gatccacccctgccctttgggtcaagaaatgatgaacctctgta 703
>gb|AF110780.1|AF110780 Volvox carteri f. nagariensis clone G14 oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1427 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 352 gcgttgtcgtagccagtagagccaccacggccctttgggtcgaggaa 398 |||||||||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 709 gcgttgtcgtagccggtcgagccaccgcggcccttggggtccaggaa 663
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1 ggttttatactagcatacacacacaaacaca 31 ||||| ||||||||||||||||||| ||||| Sbjct: 164218 ggtttgatactagcatacacacacacacaca 164188
>ref|XM_483762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 509 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>ref|XM_507334.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.11 mRNA Length = 561 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 46.1 bits (23), Expect = 0.092 Identities = 44/51 (86%) Strand = Plus / Minus Query: 150 gatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctg 200 |||||||||||||||||| ||||||| || ||||| ||||| || ||||| Sbjct: 489 gatcttgacatccttgggggccttggaccccaggtctgtgtcagagggctg 439
>ref|XM_505779.1| Yarrowia lipolytica CLIB122, YALI0F23221g predicted mRNA Length = 1518 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 298 ttctccttggccagctcctcctc 320 ||||||||||||||||||||||| Sbjct: 1508 ttctccttggccagctcctcctc 1486
>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence Length = 160981 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 6 tatactagcatacacacacaaacacat 32 ||||||| ||||||||||||||||||| Sbjct: 130845 tatactaccatacacacacaaacacat 130819
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 27959206 acgttctccttggcccgctcctcctcg 27959180
>gb|AC009432.7|AC009432 Homo sapiens chromosome 15, clone RP11-57P19, complete sequence Length = 199609 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 tatactagcatacacacacaaacacat 32 ||||||| ||||||||||||||||||| Sbjct: 120993 tatactaccatacacacacaaacacat 121019
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 36698 acgttctccttggcccgctcctcctcg 36672
>dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 ttctccttggccagctcctcctc 320 ||||||||||||||||||||||| Sbjct: 3045240 ttctccttggccagctcctcctc 3045262 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ctccttggccagctcctcct 319 |||||||||||||||||||| Sbjct: 1792326 ctccttggccagctcctcct 1792307
>dbj|AB029059.1| Oryza sativa (japonica cultivar-group) OsIF1-1 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 498 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 295 acgttctccttggccagctcctcctcg 321 ||||||||||||||| ||||||||||| Sbjct: 165 acgttctccttggcccgctcctcctcg 139
>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence Length = 252659 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacattgt 35 |||||||||||||||||||||| Sbjct: 110152 catacacacacaaacacattgt 110173
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ctagcatacacacacaaacaca 31 |||||||||||||||||||||| Sbjct: 90519 ctagcatacacacacaaacaca 90498
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 gaggaacccctgtagctgggca 421 |||||||||||||||||||||| Sbjct: 169515 gaggaacccctgtagctgggca 169536
>gb|AC155333.5| Mus musculus 6 BAC RP24-475M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189462 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 atactagcatacacacacaaacacat 32 |||| ||||||||||||||||||||| Sbjct: 42004 atacaagcatacacacacaaacacat 41979
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 actcgagctgcgcgtaccacac 143 |||||||||||||||||||||| Sbjct: 28 actcgagctgcgcgtaccacac 7
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacacatt 33 |||||||||||||||||||||| Sbjct: 51641 agcatacacacacaaacacatt 51620
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacacatt 33 |||||||||||||||||||||| Sbjct: 77460 agcatacacacacaaacacatt 77439
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 gaggaacccctgtagctgggca 421 |||||||||||||||||||||| Sbjct: 41451 gaggaacccctgtagctgggca 41472
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacacatt 33 |||||||||||||||||||||| Sbjct: 145008 agcatacacacacaaacacatt 144987
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacacatt 33 |||||||||||||||||||||| Sbjct: 18832 agcatacacacacaaacacatt 18853
>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence Length = 233631 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacacat 32 ||||||||||||||||||||| Sbjct: 151698 agcatacacacacaaacacat 151678
>ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 31 ctcctcctcgtctcctccgcctccg 55
>gb|BT016549.1| Zea mays clone Contig382 mRNA sequence Length = 713 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cttggccagctcctcctcgtc 323 ||||||||||||||||||||| Sbjct: 99 cttggccagctcctcctcgtc 119
>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 7 atactagcatacacacacaaacaca 31 ||||| ||||||||||||||||||| Sbjct: 151395 atacttgcatacacacacaaacaca 151371
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 atacacacacaaacacattgttgcc 39 ||||||||||| ||||||||||||| Sbjct: 66999 atacacacacatacacattgttgcc 66975
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tagcatacacacacaaacaca 31 ||||||||||||||||||||| Sbjct: 116709 tagcatacacacacaaacaca 116729
>gb|AY071483.1| Drosophila melanogaster RE55321 full insert cDNA Length = 952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 acacacacaaacacattgttg 37 ||||||||||||||||||||| Sbjct: 125345 acacacacaaacacattgttg 125325
>gb|AC170737.3| Sorex araneus clone SA_Ba-480N17, complete sequence Length = 173928 Score = 42.1 bits (21), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tgcccgtggaggaggacccnttct 292 ||||||||||||||||||| |||| Sbjct: 1654 tgcccgtggaggaggaccctttct 1677
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 ctccttggccagctcctcctc 320 ||||||||||||||||||||| Sbjct: 28382 ctccttggccagctcctcctc 28362
>gb|AC095904.7| Rattus norvegicus 9 BAC CH230-10L20 (Children's Hospital Oakland Research Institute) complete sequence Length = 212732 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tagcatacacacacaaacaca 31 ||||||||||||||||||||| Sbjct: 31304 tagcatacacacacaaacaca 31324
>emb|AL022578.1|HS393P12 Human DNA sequence from clone RP3-393P12 on chromosome Xp11.21 Contains a C2H2 type zinc finger pseudogene, a WAS protein family member 2 (WASF2) pseudogene (LOC286404), a ribosomal protein L7 (RPL7) pseudogene and the 5' end of a gene for a novel zinc finger protein, complete sequence Length = 104597 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tagcatacacacacaaacaca 31 ||||||||||||||||||||| Sbjct: 19937 tagcatacacacacaaacaca 19957
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 acacacacaaacacattgttg 37 ||||||||||||||||||||| Sbjct: 38879 acacacacaaacacattgttg 38899
>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 195873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tagcatacacacacaaacaca 31 ||||||||||||||||||||| Sbjct: 138562 tagcatacacacacaaacaca 138542
>ref|NM_143543.2| Drosophila melanogaster Jonah 99Fi CG18030-RA (Jon99Fi), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>ref|NM_143542.1| Drosophila melanogaster Jonah 99Fii CG2229-RA (Jon99Fii), mRNA Length = 914 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AY070585.1| Drosophila melanogaster RE68767 full length cDNA Length = 937 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 132 accctggatcttgacatcctt 112
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 3832 accctggatcttgacatcctt 3812
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 acacacacaaacacattgttg 37 ||||||||||||||||||||| Sbjct: 35597 acacacacaaacacattgttg 35617
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 26088275 ctcctcctcgtctcctccgcctccg 26088299
>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence Length = 169557 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacacat 32 ||||||||||||||||||||| Sbjct: 48660 agcatacacacacaaacacat 48640
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 59864 accctggatcttgacatcctt 59844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 58565 accctggatcttgacatcctt 58585
>gb|AC012457.7| Homo sapiens BAC clone RP11-509E16 from 2, complete sequence Length = 95214 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacatt 33 ||||||||||||||||||||| Sbjct: 94339 gcatacacacacaaacacatt 94319
>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence Length = 197652 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacatt 33 ||||||||||||||||||||| Sbjct: 1125 gcatacacacacaaacacatt 1105
>dbj|AK103369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P16, full insert sequence Length = 816 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 64 ctcctcctcgtctcctccgcctccg 88
>dbj|AK102934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114I03, full insert sequence Length = 1488 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 89 ctcctcctcgtctcctccgcctccg 113
>gb|AC154860.2| Mus musculus BAC clone RP23-9N20 from 13, complete sequence Length = 192309 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacatt 33 ||||||||||||||||||||| Sbjct: 22835 gcatacacacacaaacacatt 22855
>dbj|AK061536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F08, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 65 ctcctcctcgtctcctccgcctccg 89
>gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, complete sequence Length = 190380 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacacat 32 ||||||||||||||||||||| Sbjct: 155039 agcatacacacacaaacacat 155059
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 57447 accctggatcttgacatcctt 57427 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 accctggatcttgacatcctt 164 ||||||||||||||||||||| Sbjct: 56148 accctggatcttgacatcctt 56168
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacattg 34 ||||||||||||||||||||| Sbjct: 63889 catacacacacaaacacattg 63909
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccg 336 ||||||||||||||||| ||||||| Sbjct: 122602 ctcctcctcgtctcctccgcctccg 122626
>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete sequence Length = 205067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacatt 33 ||||||||||||||||||||| Sbjct: 141959 gcatacacacacaaacacatt 141979
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 acacacacaaacacattgttgcctc 41 ||||||||| ||||||||||||||| Sbjct: 84913 acacacacacacacattgttgcctc 84937
>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete sequence Length = 158861 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tagcatacacacacaaacaca 31 ||||||||||||||||||||| Sbjct: 15056 tagcatacacacacaaacaca 15036
>gb|AC169669.1| Mus musculus chromosome 7, clone wi1-1415D6, complete sequence Length = 37683 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 16941 catacacacacaaacacatt 16922
>gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosome 17, complete sequence Length = 169205 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 123007 gcatacacacacaaacacat 122988
>gb|AC165247.2| Mus musculus BAC clone RP24-213G21 from chromosome 13, complete sequence Length = 162597 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 74510 agcatacacacacaaacaca 74491
>gb|AC163020.9| Mus musculus chromosome 7, clone RP23-36L11, complete sequence Length = 215384 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 102720 gcatacacacacaaacacat 102739
>ref|XM_514032.1| PREDICTED: Pan troglodytes LOC457555 (LOC457555), mRNA Length = 4122 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gccagctcctcctcgtctcctctg 330 |||||||||||||||| ||||||| Sbjct: 37 gccagctcctcctcgtttcctctg 14
>gb|AC131065.16| Mus musculus chromosome 18, clone RP23-21J21, complete sequence Length = 208270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 195461 gcatacacacacaaacacat 195442
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 132602 gcatacacacacaaacacat 132621 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 132495 gcatacacacacaaacacat 132514
>gb|AC161412.10| Mus musculus chromosome 7, clone RP24-78I5, complete sequence Length = 172087 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 137657 gcatacacacacaaacacat 137676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 11237 catacacacacaaacacatt 11218
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ccagctcctcctcgtctcctctgc 331 |||||||||||||||||| ||||| Sbjct: 85200 ccagctcctcctcgtctcatctgc 85177
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 735714 catacacacacaaacacatt 735695
>gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6, complete sequence Length = 37931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 34424 catacacacacaaacacatt 34405
>gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8, complete sequence Length = 163689 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 146865 catacacacacaaacacatt 146884
>gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, complete sequence Length = 168732 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 actagcatacacacacaaacacat 32 ||||||||||||||||| |||||| Sbjct: 129119 actagcatacacacacagacacat 129142
>gb|AC127756.4| Rattus norvegicus 16 BAC CH230-166D23 (Children's Hospital Oakland Research Institute) complete sequence Length = 176794 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 172975 gcatacacacacaaacacat 172994
>ref|XM_875064.1| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 2 (LOC520966), mRNA Length = 1403 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 136 tctccttggccagctcctcc 117
>ref|XM_599218.2| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 1 (LOC520966), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 136 tctccttggccagctcctcc 117
>ref|XM_418941.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20330 (LOC420852), mRNA Length = 554 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 146 tctccttggccagctcctcc 127
>gb|AC112155.3| Mus musculus BAC clone RP24-100G17 from chromosome 16, complete sequence Length = 169864 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 89167 gcatacacacacaaacacat 89186
>ref|XM_959978.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 acgctgagggtgatgttgcc 272 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|XM_960181.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctcc 335 ||||||||| |||||||||||||| Sbjct: 1767 ctcctcctcctctcctctgcctcc 1790
>ref|XM_329416.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctcc 335 ||||||||| |||||||||||||| Sbjct: 1767 ctcctcctcctctcctctgcctcc 1790
>ref|XM_331675.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 acgctgagggtgatgttgcc 272 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|NM_018988.1| Homo sapiens glucose-fructose oxidoreductase domain containing 1 (GFOD1), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 801 tctccttggccagctcctcc 782
>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence Length = 190196 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 152532 agcatacacacacaaacaca 152551
>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 179648 catacacacacaaacacatt 179667
>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence Length = 275200 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 49213 catacacacacaaacacatt 49232
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 63490 gcatacacacacaaacacat 63509
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 170271 agcatacacacacaaacaca 170290
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ctcctcctcgtctcctctgcctcc 335 ||||||||| |||||||||||||| Sbjct: 56138 ctcctcctcctctcctctgcctcc 56115
>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete sequence Length = 174558 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 27628 catacacacacaaacacatt 27647
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence Length = 174764 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 58645 gcatacacacacaaacacat 58664
>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete sequence Length = 155342 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 113770 gcatacacacacaaacacat 113789
>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete sequence Length = 183076 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 atactagcatacacacacaaacacattg 34 ||||| ||||||||||||| |||||||| Sbjct: 4261 atacttgcatacacacacatacacattg 4234
>ref|XM_802280.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511685.40) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgttgcccgtggaggaggac 285 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctcc 335 |||||||||||||||||| ||||| Sbjct: 189896 ctcctcctcgtctcctcttcctcc 189919
>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence Length = 191669 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 46454 catacacacacaaacacatt 46435
>gb|AC073590.5| Mus musculus chromosome 12 clone RP23-206K17, complete sequence Length = 204107 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 82319 gcatacacacacaaacacat 82300
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 19427 gcatacacacacaaacacat 19408
>ref|XM_815950.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508741.90) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgttgcccgtggaggaggac 285 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC092089.2| Danio rerio clone 85I7, complete sequence Length = 62442 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 acacacacaaacacattgtt 36 |||||||||||||||||||| Sbjct: 7761 acacacacaaacacattgtt 7780
>emb|AL441963.7| Human DNA sequence from clone RP11-280O24 on chromosome 9 Contains a ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (ATP5H) (ATPQ, ATP5JD) pseudogene, the 3' end of the NFIB gene for nuclear factor I/B (NFIB2, NFIB3, NFI-RED) and a ribosomal protein L7a (RPL7A) pseudogene, complete sequence Length = 159476 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 34181 gcatacacacacaaacacat 34200
>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 36485 catacacacacaaacacatt 36504
>gb|AC115120.4| Mus musculus BAC clone RP23-116M23 from 16, complete sequence Length = 222066 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 6244 catacacacacaaacacatt 6225
>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence Length = 199711 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 74154 gcatacacacacaaacacat 74135
>ref|XM_763044.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_64_29090_28800) partial mRNA Length = 291 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccggcg 339 |||||||||||| ||||||||| ||||| Sbjct: 83 ctcctcctcgtcgcctctgccttcggcg 110
>ref|XM_764745.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_217_21978_22328) partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccggcg 339 |||||||||||| ||||||||| ||||| Sbjct: 13 ctcctcctcgtcgcctctgccttcggcg 40
>ref|XM_763043.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_64_29074_28670) partial mRNA Length = 405 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccggcg 339 |||||||||||| ||||||||| ||||| Sbjct: 67 ctcctcctcgtcgcctctgccttcggcg 94
>gb|AC023141.6| Homo sapiens BAC clone RP11-548K12 from 7, complete sequence Length = 197637 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 115539 gcatacacacacaaacacat 115520
>gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, complete sequence Length = 172160 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 150708 gcatacacacacaaacacat 150689
>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence Length = 248718 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 28105 gcatacacacacaaacacat 28086
>gb|AC124230.6| Mus musculus chromosome 1, clone RP23-474K11, complete sequence Length = 202996 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 170050 agcatacacacacaaacaca 170031
>gb|AC131390.3| Homo sapiens chromosome 16 clone RP11-349E19, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 155785 gcatacacacacaaacacat 155766
>emb|AL844175.17| Human DNA sequence from clone XXyac-29IB3 on chromosome X Contains a novel gene and gene FLJ30416, complete sequence Length = 67853 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 63027 catacacacacaaacacatt 63046
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 tatcttcacttctgctatgctctagtta 120 ||||| |||||||||| ||||||||||| Sbjct: 137608 tatctgcacttctgctgtgctctagtta 137635
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 42445 tctccttggccagctcctcc 42464
>ref|XM_505369.1| Yarrowia lipolytica CLIB122, YALI0F13343g predicted mRNA Length = 6255 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ctccttggccagctcctcct 319 |||||||||||||||||||| Sbjct: 3537 ctccttggccagctcctcct 3518
>emb|AL353708.10| Human DNA sequence from clone RP11-533E19 on chromosome 1 Contains the 5' ends of two novel genes, two novel genes and a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene, complete sequence Length = 90125 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gccagctcctcctcgtctcctctg 330 |||||||||||||||| ||||||| Sbjct: 72937 gccagctcctcctcgtttcctctg 72914
>gb|AC091514.2| Rattus norvegicus strain Brown Norway clone RP31-223K12, complete sequence Length = 148370 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 43989 catacacacacaaacacatt 43970
>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2 Contains the 3' end of the PTGFR gene for prostaglandin, complete sequence Length = 135758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 8190 agcatacacacacaaacaca 8171
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 acgctgagggtgatgttgcc 272 |||||||||||||||||||| Sbjct: 90457 acgctgagggtgatgttgcc 90438
>emb|AJ784854.1| Cyanophora paradoxa mRNA for oxygen-evolving enhancer protein 1 (psbO gene) Length = 1338 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cgttctccttggccagctcctcct 319 |||||||||| ||||||||||||| Sbjct: 860 cgttctccttagccagctcctcct 837 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 accacggccctttgggtcgaggaa 398 |||||||||||| ||||||||||| Sbjct: 790 accacggcccttcgggtcgaggaa 767
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaacacattgttg 37 |||||||||||||||||||| Sbjct: 160427 cacacacaaacacattgttg 160408
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 205613 catacacacacaaacacatt 205594
>emb|AL662908.7| Mouse DNA sequence from clone RP23-478O10 on chromosome 11 Contains two NACHT, leucine rich repeat and PYD containing 1 (NALP1) pseudogenes, complete sequence Length = 96115 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 73131 catacacacacaaacacatt 73112
>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5, complete sequence Length = 93211 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 72056 gcatacacacacaaacacat 72037
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgagggtgatgttgcccgtggagg 280 |||||||||||| ||||||||||| Sbjct: 3055754 tgagggtgatgtcgcccgtggagg 3055731
>emb|BX511166.9| Zebrafish DNA sequence from clone RP71-84B10 in linkage group 13, complete sequence Length = 152870 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 41619 gcatacacacacaaacacat 41600
>emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in linkage group 5, complete sequence Length = 226730 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 102050 catacacacacaaacacatt 102069
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 88852 agcatacacacacaaacaca 88871
>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 121745 gcatacacacacaaacacat 121764
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ctggatcttgacatccttgg 166 |||||||||||||||||||| Sbjct: 19307 ctggatcttgacatccttgg 19288
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ctggatcttgacatccttgg 166 |||||||||||||||||||| Sbjct: 36770 ctggatcttgacatccttgg 36751
>emb|CR623257.1| full-length cDNA clone CS0DI060YJ02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1759 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 1469 catacacacacaaacacatt 1450
>emb|CR622234.1| full-length cDNA clone CS0DI014YN07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 1485 catacacacacaaacacatt 1466
>gb|AC093452.50| Mus musculus strain C57BL/6J clone rp23-458j13 map 1, complete sequence Length = 199859 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 38351 catacacacacaaacacatt 38370
>dbj|AK091686.1| Homo sapiens cDNA FLJ34367 fis, clone FEBRA2016621 Length = 2256 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 1082 gcatacacacacaaacacat 1063
>gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187547 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 66938 catacacacacaaacacatt 66919
>gb|AC107463.5| Homo sapiens BAC clone RP11-553P9 from 4, complete sequence Length = 93661 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 81651 gcatacacacacaaacacat 81632
>dbj|AB073392.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla03771, full insert sequence Length = 2116 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 937 gcatacacacacaaacacat 918
>gb|AC093896.3| Homo sapiens BAC clone RP11-719N9 from 4, complete sequence Length = 156177 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 122450 catacacacacaaacacatt 122469
>gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, complete sequence Length = 158840 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 114159 catacacacacaaacacatt 114140
>gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, complete sequence Length = 175229 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 131298 gcatacacacacaaacacat 131317
>emb|BX571849.18| Zebrafish DNA sequence from clone DKEY-185N1 in linkage group 2, complete sequence Length = 128844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 66654 agcatacacacacaaacaca 66673
>gb|AC156551.5| Mus musculus chromosome 8, clone RP23-348E18, complete sequence Length = 207944 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacattgttgcct 40 ||||||||||||| ||||| |||||||| Sbjct: 101400 gcatacacacacagacacactgttgcct 101427
>gb|AY860592.1| Physcia aipolia isolate 8Aa 26S ribosomal RNA gene, partial sequence Length = 1314 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtgatgttgcccgtggagga 281 |||||||||||||||||||| Sbjct: 546 gtgatgttgcccgtggagga 527
>gb|AY860591.1| Physcia aipolia isolate 2Ab 26S ribosomal RNA gene, partial sequence Length = 1437 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtgatgttgcccgtggagga 281 |||||||||||||||||||| Sbjct: 586 gtgatgttgcccgtggagga 567
>gb|AY860590.1| Physcia aipolia isolate 6Ah 26S ribosomal RNA gene, partial sequence Length = 1321 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtgatgttgcccgtggagga 281 |||||||||||||||||||| Sbjct: 554 gtgatgttgcccgtggagga 535
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 actagcatacacacacaaacacat 32 |||| ||||||||||||||||||| Sbjct: 136740 actaacatacacacacaaacacat 136717
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence Length = 197131 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 actagcatacacacacaaacacat 32 |||| ||||||||||||||||||| Sbjct: 1890 actaacatacacacacaaacacat 1867
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 32103 catacacacacaaacacatt 32122
>emb|CR386366.1| Gallus gallus finished cDNA, clone ChEST938k13 Length = 558 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 149 tctccttggccagctcctcc 130
>dbj|AK041666.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630028N07 product:unclassifiable, full insert sequence Length = 3306 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 2816 catacacacacaaacacatt 2835
>gb|AC015963.8|AC015963 Homo sapiens chromosome , clone RP11-112B21, complete sequence Length = 172657 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 97377 catacacacacaaacacatt 97396
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ccagctcctcctcgtctcctctgc 331 |||||||||||||||||| ||||| Sbjct: 14356414 ccagctcctcctcgtctcatctgc 14356391
>gb|AF164624.1|AF164624 Giardia intestinalis protein disulfide isomerase 5 (PDI-5) gene, complete cds Length = 540 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccggcg 339 |||||||||||| ||||||||| ||||| Sbjct: 127 ctcctcctcgtcgcctctgccttcggcg 154
>gb|AY773914.1| Physcia aipolia 26S large subunit ribosomal RNA gene, partial sequence Length = 1436 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtgatgttgcccgtggagga 281 |||||||||||||||||||| Sbjct: 585 gtgatgttgcccgtggagga 566
>gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcatacacacacaaacaca 31 |||||||||||||||||||| Sbjct: 76667 agcatacacacacaaacaca 76686
>gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosome 17, complete sequence Length = 182101 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 21366 catacacacacaaacacatt 21385
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttgcctcgattctttcctct 54 |||||||||||||||||||| Sbjct: 120467 ttgcctcgattctttcctct 120448
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ctccggcgggcagagccaccgcgt 355 |||||||||||||||||| ||||| Sbjct: 6967618 ctccggcgggcagagccagcgcgt 6967641
>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence Length = 207362 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 198533 gcatacacacacaaacacat 198552
>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188527 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 49238 catacacacacaaacacatt 49257
>gb|AF164117.1|AF164117 Giardia intestinalis protein disulfide isomerase 3 gene, complete cds Length = 550 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 ctcctcctcgtctcctctgcctccggcg 339 |||||||||||| ||||||||| ||||| Sbjct: 127 ctcctcctcgtcgcctctgccttcggcg 154
>gb|AC125796.2| Homo sapiens chromosome 16 clone RP11-420N3, complete sequence Length = 162666 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 147938 gcatacacacacaaacacat 147957
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 269 tgcccgtggaggaggacccnttc 291 ||||||||||||||||||| ||| Sbjct: 166025 tgcccgtggaggaggaccccttc 166047
>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10, complete sequence Length = 187807 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 70572 gcatacacacacaaacacat 70553
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 80072 tctccttggccagctcctcc 80053
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cgccttggcgccgaggtcgg 187 |||||||||||||||||||| Sbjct: 3379461 cgccttggcgccgaggtcgg 3379480
>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence Length = 229574 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 158180 catacacacacaaacacatt 158161
>emb|BX647419.1|HSM807564 Homo sapiens mRNA; cDNA DKFZp686O19124 (from clone DKFZp686O19124) Length = 1973 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 1565 catacacacacaaacacatt 1546
>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete sequence Length = 212406 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 71032 catacacacacaaacacatt 71013
>emb|BX647170.1|HSM807314 Homo sapiens mRNA; cDNA DKFZp686H12223 (from clone DKFZp686H12223) Length = 4573 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 4219 catacacacacaaacacatt 4200
>emb|BX647105.1|HSM807249 Homo sapiens mRNA; cDNA DKFZp686N18124 (from clone DKFZp686N18124) Length = 1973 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 1565 catacacacacaaacacatt 1546
>dbj|AK000337.1| Homo sapiens cDNA FLJ20330 fis, clone HEP10296 Length = 3033 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 801 tctccttggccagctcctcc 782
>ref|XM_556986.1| Anopheles gambiae str. PEST ENSANGP00000026473 (ENSANGG00000023329), partial mRNA Length = 564 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cttggccagctcctcctcgt 322 |||||||||||||||||||| Sbjct: 384 cttggccagctcctcctcgt 365
>dbj|AK111406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E08, full insert sequence Length = 1428 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ccagctcctcctcgtctcctctgc 331 |||||||||||||||||| ||||| Sbjct: 954 ccagctcctcctcgtctcatctgc 977
>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence Length = 176948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 140098 catacacacacaaacacatt 140079
>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19, complete sequence Length = 128597 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 103762 catacacacacaaacacatt 103743
>emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 in linkage group 10, complete sequence Length = 176986 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 1740 catacacacacaaacacatt 1759
>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3, complete sequence Length = 160599 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 108426 catacacacacaaacacatt 108445
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 1754729 gcatacacacacaaacacat 1754748
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 577059 tctccttggccagctcctcc 577040
>gb|AF071792.1|AF071792 Micromonospora olivasterospora RNA polymerase sigma-like factor gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 172 tctccttggccagctcctcc 153
>gb|AF071791.1|AF071791 Micromonospora purpurea RNA polymerase sigma-like factor gene, partial cds Length = 483 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctccttggccagctcctcc 318 |||||||||||||||||||| Sbjct: 172 tctccttggccagctcctcc 153
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 10428 gcatacacacacaaacacat 10409
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 269 tgcccgtggaggaggacccnttc 291 ||||||||||||||||||| ||| Sbjct: 1723775 tgcccgtggaggaggaccccttc 1723753
>gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, complete sequence Length = 182640 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 173070 gcatacacacacaaacacat 173089
>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence Length = 188473 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 42523 gcatacacacacaaacacat 42542
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 acgctgagggtgatgttgcc 272 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 acgctgagggtgatgttgcc 272 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete sequence Length = 221399 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 catacacacacaaacacatt 33 |||||||||||||||||||| Sbjct: 155310 catacacacacaaacacatt 155291
>emb|AL359087.17| Human DNA sequence from clone RP5-900A3, complete sequence Length = 109860 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcatacacacacaaacacat 32 |||||||||||||||||||| Sbjct: 68978 gcatacacacacaaacacat 68959 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,657,465 Number of Sequences: 3902068 Number of extensions: 4657465 Number of successful extensions: 294667 Number of sequences better than 10.0: 254 Number of HSP's better than 10.0 without gapping: 254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 293054 Number of HSP's gapped (non-prelim): 1608 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
