Clone Information

BLAST Search Result

Clone Name	rbags29g01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS24_ARATH (Q9SS17) 40S ribosomal protein S24	210	3e-54
2	RS24_RAT (P62850) 40S ribosomal protein S24	155	8e-38
3	RS24_MOUSE (P62849) 40S ribosomal protein S24	155	8e-38
4	RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein...	155	8e-38
5	RS24_HUMAN (P62847) 40S ribosomal protein S24	155	8e-38
6	RS24_PONPY (Q5RAQ8) 40S ribosomal protein S24	155	8e-38
7	RS24_BOVIN (Q56JU9) 40S ribosomal protein S24	155	8e-38
8	RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)	154	2e-37
9	RS24_MACFA (Q4R5H5) 40S ribosomal protein S24	154	2e-37
10	RS24_SPOFR (Q962Q6) 40S ribosomal protein S24	153	5e-37
11	RS24_RHIRA (P14249) 40S ribosomal protein S24	153	5e-37
12	RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24	152	8e-37
13	RS24_FUGRU (O42387) 40S ribosomal protein S24	149	9e-36
14	RS24B_SCHPO (O59865) 40S ribosomal protein S24-B	149	9e-36
15	RS24A_SCHPO (O13784) 40S ribosomal protein S24-A	145	1e-34
16	RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)	145	1e-34
17	RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24	142	1e-33
18	RS24_PYRFU (Q8U442) 30S ribosomal protein S24e	62	1e-09
19	RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e	59	1e-08
20	RS24_PYRHO (P58746) 30S ribosomal protein S24e	59	2e-08
21	RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e	57	4e-08
22	RS24_PYRKO (Q5JIY8) 30S ribosomal protein S24e	57	5e-08
23	RS24_NANEQ (Q74M50) 30S ribosomal protein S24e	51	3e-06
24	RS24_PICTO (Q6L0P8) 30S ribosomal protein S24e	47	7e-05
25	RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e	47	7e-05
26	RS24_SULTO (Q975Q9) 30S ribosomal protein S24e	46	9e-05
27	RS24_METTH (O26367) 30S ribosomal protein S24e	45	2e-04
28	RS24_HALMA (P19953) 30S ribosomal protein S24e (HS15) (E1.2)	45	2e-04
29	RS24_SULSO (Q97ZY6) 30S ribosomal protein S24e	43	0.001
30	RS24_THEAC (Q9HJ79) 30S ribosomal protein S24e	42	0.002
31	RS24_THEVO (Q97BH3) 30S ribosomal protein S24e	42	0.002
32	RS24_SULAC (Q4JAF9) 30S ribosomal protein S24e	42	0.002
33	RS24_METKA (Q8TVD8) 30S ribosomal protein S24e	41	0.003
34	RS24_HALSA (Q9HNL4) 30S ribosomal protein S24e	35	0.20
35	K0853_HUMAN (Q5T200) Protein KIAA0853	35	0.26
36	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	33	0.75
37	GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor	33	0.98
38	RPGR1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase regula...	33	0.98
39	CWC15_EMENI (Q5B020) Pre-mRNA-splicing factor cwc15	32	1.7
40	FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)	32	1.7
41	YN23_CAEEL (P34582) Hypothetical protein T26G10.3 in chromosome III	32	2.2
42	ZBT17_HUMAN (Q13105) Zinc finger and BTB domain-containing prote...	32	2.2
43	EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysi...	32	2.2
44	NUCKS_HUMAN (Q9H1E3) Nuclear ubiquitous casein and cyclin-depend...	31	2.8
45	RS24_ARCFU (O29151) 30S ribosomal protein S24e	31	2.8
46	ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) ...	31	3.7
47	PEX26_MOUSE (Q8BGI5) Peroxisome assembly protein 26 (Peroxin-26)	31	3.7
48	PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helica...	31	3.7
49	IE68_SHV21 (Q01042) Immediate-early protein	31	3.7
50	IF2_NITOC (Q3J9B6) Translation initiation factor IF-2	30	4.9
51	ARGB_LEPIN (P59299) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin...	30	4.9
52	ARGB_LEPIC (Q75FU1) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin...	30	4.9
53	NUCKS_MOUSE (Q80XU3) Nuclear ubiquitous casein and cyclin-depend...	30	4.9
54	NUCKS_RAT (Q9EPJ0) Nuclear ubiquitous casein and cyclin-dependen...	30	4.9
55	YSNA_STRPR (P54992) Hypothetical 45.4 kDa protein in snaA-snaB i...	30	6.3
56	CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch...	30	6.3
57	PTMS_BOVIN (P08814) Parathymosin	30	6.3
58	ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens...	30	6.3
59	CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial mar...	30	6.3
60	O10S1_HUMAN (Q8NGN2) Olfactory receptor 10S1	30	6.3
61	RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein M...	30	6.3
62	ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens...	30	6.3
63	ZO1_CANFA (O97758) Tight junction protein ZO-1 (Zonula occludens...	30	6.3
64	TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger prot...	30	6.3
65	OXAA_HELPJ (Q9ZJG8) Inner membrane protein oxaA	30	8.3
66	LIPB_YEAST (Q06005) Lipoate-protein ligase, mitochondrial precur...	30	8.3

>RS24_ARATH (Q9SS17) 40S ribosomal protein S24|
          Length = 133

 Score =  210 bits (535), Expect = 3e-54
 Identities = 102/118 (86%), Positives = 113/118 (95%)
 Frame = -1

Query: 592 AVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRT 413
           AVT+RTRKFMTNRLLSRKQFV++V+HPGRANVSKA+LKE+LA++YEVKD N IFVFKFRT
Sbjct: 5   AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRT 64

Query: 412 HFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRGV 239
           HFGGGKS+GFGLIYD +E+AKKFEPKYRLIRNGL TKIEKSRKQIKERKNR KKIRGV
Sbjct: 65  HFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGV 122

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>RS24_RAT (P62850) 40S ribosomal protein S24|
          Length = 133

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MOUSE (P62849) 40S ribosomal protein S24|
          Length = 133

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein S19)|
          Length = 133

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_HUMAN (P62847) 40S ribosomal protein S24|
          Length = 133

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_PONPY (Q5RAQ8) 40S ribosomal protein S24|
          Length = 131

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_BOVIN (Q56JU9) 40S ribosomal protein S24|
          Length = 131

 Score =  155 bits (393), Expect = 8e-38
 Identities = 76/116 (65%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)|
          Length = 132

 Score =  154 bits (390), Expect = 2e-37
 Identities = 75/116 (64%), Positives = 96/116 (82%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL ++GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MACFA (Q4R5H5) 40S ribosomal protein S24|
          Length = 131

 Score =  154 bits (389), Expect = 2e-37
 Identities = 76/116 (65%), Positives = 95/116 (81%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V+ V+HPG+A V K +++E+LAK+Y+    + IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTH 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_SPOFR (Q962Q6) 40S ribosomal protein S24|
          Length = 132

 Score =  153 bits (386), Expect = 5e-37
 Identities = 75/120 (62%), Positives = 95/120 (79%)
 Frame = -1

Query: 601 TAPAVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFK 422
           T    T+RTRKFMTNRLL+RKQ V +V+HPG+  VSK +++E+LAK+Y+V   + +FVF 
Sbjct: 2   TEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFG 60

Query: 421 FRTHFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           F+T+FGGGKSTGF LIYD L+ AKKFEPK+RL R+GL  K   +RKQ KERKNR KK+RG
Sbjct: 61  FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 120

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>RS24_RHIRA (P14249) 40S ribosomal protein S24|
          Length = 148

 Score =  153 bits (386), Expect = 5e-37
 Identities = 76/126 (60%), Positives = 95/126 (75%)
 Frame = -1

Query: 616 MADAKTAPAVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNC 437
           M   +   AVT+RTRKF+TNRLL RKQ V++VIHPG ANVSK +L+ ++ K+Y+  D   
Sbjct: 15  MRTKRADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEV 73

Query: 436 IFVFKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRT 257
           + VF F+THFGGGK+TGF LIYDN+EA K FEPK+RL+R GLA   +  RKQ KE+KNR 
Sbjct: 74  VSVFGFKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNRE 133

Query: 256 KKIRGV 239
           KK RGV
Sbjct: 134 KKFRGV 139

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>RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24|
          Length = 131

 Score =  152 bits (384), Expect = 8e-37
 Identities = 74/117 (63%), Positives = 95/117 (81%)
 Frame = -1

Query: 592 AVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRT 413
           +VTLRTRKFMTNRLL RKQ VL+V+HPG+A V K +++E+LAK+Y+    + +FVF F+T
Sbjct: 4   SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTTP-DVVFVFGFKT 62

Query: 412 HFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
            FGGGK+TGF ++YD+L+ AKK EPKYRL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 63  QFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_FUGRU (O42387) 40S ribosomal protein S24|
          Length = 132

 Score =  149 bits (375), Expect = 9e-36
 Identities = 72/116 (62%), Positives = 94/116 (81%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + +FVF FRT 
Sbjct: 5   VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTTP-DVVFVFGFRTQ 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRG 242
           FGGGK+TGF ++YD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKVRG 119

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>RS24B_SCHPO (O59865) 40S ribosomal protein S24-B|
          Length = 133

 Score =  149 bits (375), Expect = 9e-36
 Identities = 72/118 (61%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = -1

Query: 592 AVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRT 413
           AVT+RTRKFMTNRLL RKQ V++++HPG+AN+SK +++E+LA++Y+  DS C+  F  RT
Sbjct: 3   AVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRT 61

Query: 412 HFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEK-SRKQIKERKNRTKKIRG 242
           HFGGG+STGF LIYD+ E+ KKFEP YRL+R G A  I+K +R+Q K+RKNR KK+ G
Sbjct: 62  HFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFG 119

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>RS24A_SCHPO (O13784) 40S ribosomal protein S24-A|
          Length = 133

 Score =  145 bits (366), Expect = 1e-34
 Identities = 70/118 (59%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = -1

Query: 592 AVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRT 413
           AVT+RTRKFMTNRLL RKQ V++++HPG+AN+SK DL+E+L ++Y+  D++ +  F  RT
Sbjct: 3   AVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRT 61

Query: 412 HFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEK-SRKQIKERKNRTKKIRG 242
           H+GGG++TGF LIYD++EA KKFEP YRL+R G A  I+K +R+Q K+RKNR KK+ G
Sbjct: 62  HYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFG 119

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>RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)|
          Length = 134

 Score =  145 bits (366), Expect = 1e-34
 Identities = 72/118 (61%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
 Frame = -1

Query: 592 AVTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRT 413
           AVT+RTRK ++N LL+RKQFV++V+HP RANVSK +L+E+LA++Y+  + + + VF FRT
Sbjct: 3   AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRT 61

Query: 412 HFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEK-SRKQIKERKNRTKKIRG 242
            FGGGKS GFGL+Y+++  AKKFEP YRL+R GLA K+EK SR+Q K++KNR KKI G
Sbjct: 62  QFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFG 119

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>RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24|
          Length = 132

 Score =  142 bits (357), Expect = 1e-33
 Identities = 68/117 (58%), Positives = 92/117 (78%)
 Frame = -1

Query: 589 VTLRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTH 410
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K +++E+LAK+Y+    + +FVF FRT 
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTTP-DVVFVFGFRTQ 63

Query: 409 FGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKKIRGV 239
           FGGGK+TGF ++YD+L+ AKK EPK+RL  +GL  K + SRKQ  ER+NR KK+R +
Sbjct: 64  FGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKVRSI 120

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>RS24_PYRFU (Q8U442) 30S ribosomal protein S24e|
          Length = 99

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 31/96 (32%), Positives = 52/96 (54%)
 Frame = -1

Query: 583 LRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFG 404
           +R ++   N+L+ RK+   E+ HPG    S+ D+K +L  + ++     +  +  R++FG
Sbjct: 3   IRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQY-IRSYFG 61

Query: 403 GGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIE 296
              S G+   YD+ E     EP+Y LIR+GL  K E
Sbjct: 62  SYISKGYAKAYDSKERMLYIEPEYILIRDGLIEKKE 97

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>RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e|
          Length = 121

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N+LL+R++ ++E +H   +  ++  ++E +AK   +  SN +FV + +T FG G+S    
Sbjct: 14  NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISN-VFVRRIKTEFGRGRSLAEV 72

Query: 379 LIYDNLEAAKKFEPKYRLIRN------GLATKIEKSRKQIKERKNRTKK 251
            +Y++ + A+  EP Y L RN       L  + +K R + +E+K R KK
Sbjct: 73  HVYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121

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>RS24_PYRHO (P58746) 30S ribosomal protein S24e|
          Length = 99

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 48/88 (54%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N+L+ RK+   E+ HPG    S+ D+K +L  + ++     +  +  R++FG  KS G+ 
Sbjct: 11  NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQY-IRSYFGSYKSKGYA 69

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIE 296
             Y + E     EP+Y LIR+G+  K E
Sbjct: 70  KYYYDKERMLYIEPEYILIRDGIIEKKE 97

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>RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e|
          Length = 99

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 28/88 (31%), Positives = 48/88 (54%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N+L+ RK+   E+ HPG    S+ D+K +L  + ++     +  +  R++FG  KS G+ 
Sbjct: 11  NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQY-IRSYFGSYKSKGYA 69

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIE 296
             Y + +     EP+Y LIR+G+  K E
Sbjct: 70  KYYYDKDRMLYIEPEYILIRDGIIEKKE 97

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>RS24_PYRKO (Q5JIY8) 30S ribosomal protein S24e|
          Length = 98

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 29/97 (29%), Positives = 51/97 (52%)
 Frame = -1

Query: 583 LRTRKFMTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFG 404
           ++  +   N+LL RK+   +V+H G    S+  +K +L  + ++ D N   +   R++FG
Sbjct: 3   IKVTEIRENKLLGRKEIYFDVLHEGEPTPSREAVKGKLVAMLDL-DPNTTVIQYIRSYFG 61

Query: 403 GGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIEK 293
              S G+   Y+  E     EP+Y L+R+GL  K E+
Sbjct: 62  SNVSKGYAKAYETRERMLYIEPEYILVRDGLVQKQEE 98

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>RS24_NANEQ (Q74M50) 30S ribosomal protein S24e|
          Length = 94

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 26/83 (31%), Positives = 48/83 (57%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N+L  R +++++V HP     ++ + KE++A++  V D N + + K  + +G   S  + 
Sbjct: 12  NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV-DKNKLVIKKIVSKYGLPYSFIYA 70

Query: 379 LIYDNLEAAKKFEPKYRLIRNGL 311
            +YDN++ AK+ E K  L RN L
Sbjct: 71  RVYDNIDTAKRVELKQILRRNNL 93

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>RS24_PICTO (Q6L0P8) 30S ribosomal protein S24e|
          Length = 102

 Score = 46.6 bits (109), Expect = 7e-05
 Identities = 30/86 (34%), Positives = 41/86 (47%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N+LL RK+    +        S+ D+++ LA  Y   D + I V K R   G  +  G+ 
Sbjct: 14  NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYG-SDESLIIVDKNRQETGKHEIKGYA 72

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATK 302
            IYD  E A  +EP Y L RN L  K
Sbjct: 73  KIYDTKEHAMLYEPDYELFRNKLKVK 98

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>RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e|
          Length = 102

 Score = 46.6 bits (109), Expect = 7e-05
 Identities = 28/90 (31%), Positives = 49/90 (54%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N L+ R++ V+ + H  +    +  L+++LA++  V D   I++   +T +G G S    
Sbjct: 12  NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGV-DIKRIYIRYIKTGYGAGLSKVRV 70

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKS 290
            +YD+ E A  FEPKY + RNG     E++
Sbjct: 71  HVYDSPERALSFEPKYIIERNGGVNPFEEA 100

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>RS24_SULTO (Q975Q9) 30S ribosomal protein S24e|
          Length = 120

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 25/92 (27%), Positives = 50/92 (54%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N ++ R++  ++V H G   +S+ D+ + +A  Y  ++ + + + K  T +G G S    
Sbjct: 25  NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQE-DLVVIKKIHTLYGAGISYVRA 83

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKSRK 284
            IY++ +  ++FEP+Y LI      K++K  K
Sbjct: 84  NIYNDKKTLQEFEPQY-LIGRDTGQKVKKGGK 114

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>RS24_METTH (O26367) 30S ribosomal protein S24e|
          Length = 100

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 24/89 (26%), Positives = 49/89 (55%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N LL+RK+   E ++ G +     ++K +L  + +  D + + V K    FG  ++TG+ 
Sbjct: 11  NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDA-DKDLLVVDKIDQGFGEPRATGYA 69

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEK 293
            IY++ E   + EP++ + +N  A++ E+
Sbjct: 70  KIYESAEKLTEIEPEHVIKKNTEASEEEE 98

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>RS24_HALMA (P19953) 30S ribosomal protein S24e (HS15) (E1.2)|
          Length = 102

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N +L R     EV+H   A  S+  +++ LA     KD+  + + K  T FG  K+ G+ 
Sbjct: 11  NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLN-KDAEEVVIHKLDTKFGMRKTVGYA 68

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQ 281
            +YDN E A+  E  + L RN +    E+  ++
Sbjct: 69  KVYDNPEYARDVEQDHMLERNKIVADGEEEAEE 101

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>RS24_SULSO (Q97ZY6) 30S ribosomal protein S24e|
          Length = 120

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 29/91 (31%), Positives = 47/91 (51%)
 Frame = -1

Query: 565 MTNRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTG 386
           M N ++ R++  L+V H G    S+ D+ + + +    ++ N + V K  T +G G S  
Sbjct: 21  MQNSVIGRREISLKVYHMGSGTPSRKDIIKAIIQALGSQE-NLVVVRKISTSYGAGISNV 79

Query: 385 FGLIYDNLEAAKKFEPKYRLIRNGLATKIEK 293
              IY + E  +K EPKY L R+   TK +K
Sbjct: 80  KLHIYKSREILEKVEPKYLLDRDA-GTKQKK 109

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>RS24_THEAC (Q9HJ79) 30S ribosomal protein S24e|
          Length = 98

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/89 (31%), Positives = 43/89 (48%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N +L RK+    +        S+ ++KE +AK +E  D   + V   +   G  +  G+ 
Sbjct: 11  NPILKRKEIKYVLKFDSSRTPSREEIKELIAK-HEGVDKELVIVDNNKQLTGKHEIEGYT 69

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEK 293
            IY +  +A  +EP Y LIRNGL  K  K
Sbjct: 70  KIYADKPSAMLYEPDYELIRNGLKQKEAK 98

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>RS24_THEVO (Q97BH3) 30S ribosomal protein S24e|
          Length = 99

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/89 (31%), Positives = 42/89 (47%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N +L RK+    +        S+ ++KE +AK +E      I V   +   G  +  G+ 
Sbjct: 12  NPILKRKELKYTLKFENARTPSREEIKEIIAK-HEGAQKELIIVESNKQLTGKHEIVGYT 70

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEK 293
            IY +  +A  +EP Y LIRNGL  K  K
Sbjct: 71  KIYQDKASAMLYEPDYELIRNGLKQKEAK 99

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>RS24_SULAC (Q4JAF9) 30S ribosomal protein S24e|
          Length = 118

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/98 (24%), Positives = 52/98 (53%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N + +R++  +++ H G    S+ +L + +A  +   + + + V K  T++G G S    
Sbjct: 23  NNVANRRELYIKLFHIGSGTPSRKELVKAIASTFSTAE-DLVVVKKVFTNYGSGISYARV 81

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERK 266
            +Y + ++ +K EP+Y LI      KI+K  K  ++++
Sbjct: 82  NVYKDKDSLQKLEPQY-LIGRDTGQKIKKGGKSAQKQQ 118

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>RS24_METKA (Q8TVD8) 30S ribosomal protein S24e|
          Length = 116

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 24/103 (23%), Positives = 52/103 (50%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N LL RK+    V H       K+++  +LA I +V D   + + +  + FG  ++ G+ 
Sbjct: 11  NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDV-DKEVVLIDRMESEFGKRETKGYA 69

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKERKNRTKK 251
            IY ++E  +  EP++          +E+ +K ++E ++ +++
Sbjct: 70  KIYKSMEHLEDIEPEH---------MVERHKKVLEELESESEE 103

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>RS24_HALSA (Q9HNL4) 30S ribosomal protein S24e|
          Length = 102

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 25/81 (30%), Positives = 40/81 (49%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N LL R     +++H   A  S+  +++ LA   + KDS  + V +  T FG  K+ G  
Sbjct: 11  NPLLHRTDVQFKIVHDD-ATPSRLSVRDSLAAKLD-KDSEEVVVHELDTKFGMRKTRGRA 68

Query: 379 LIYDNLEAAKKFEPKYRLIRN 317
            +YD+   A + E  + L RN
Sbjct: 69  KVYDSPAQAAEVEHDHMLERN 89

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 14/54 (25%), Positives = 33/54 (61%)
 Frame = -3

Query: 356 RQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKD 195
           R+E   + + ++ER   ++RE  +A + ++E++++  W  +DKG   + E R++
Sbjct: 753 REERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREE 806

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>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKD 195
           QE   +V+ D+E    ++ E  + ++ EEE+++E+   +ED+    +++  +D
Sbjct: 566 QEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEED 618



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKD 195
           QE   +VQ D+E     + E  + ++ EEE+++E+   +E++    ++E  +D
Sbjct: 559 QEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEED 611

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>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor|
          Length = 639

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = -3

Query: 356 RQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRK 198
           ++E + + Q  QE+  HQ +E  + ++ ++E +++D  SQE +G   Q E R+
Sbjct: 155 KEEEKHEWQHKQEK--HQGKESEEEEEDQDEDEEQDKESQESEGSESQREPRR 205

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>RPGR1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase regulator-interacting|
            protein 1 (RPGR-interacting protein 1)
          Length = 1331

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 14/55 (25%), Positives = 32/55 (58%)
 Frame = -3

Query: 359  GRQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKD 195
            G +EV+ +   ++E    ++ EV +  + EEE+++E+   +E++    +EE  K+
Sbjct: 917  GEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKE 971



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/61 (22%), Positives = 34/61 (55%)
 Frame = -3

Query: 353  QEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKDS*LLAAF 174
            +EV+ + + ++E    ++ E  +  + EEE+D+++   +E++    +EE      L A+F
Sbjct: 937  EEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEEEEEEEEEEEDENKDVLEASF 996

Query: 173  S 171
            +
Sbjct: 997  T 997

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>CWC15_EMENI (Q5B020) Pre-mRNA-splicing factor cwc15|
          Length = 232

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 11/118 (9%)
 Frame = -3

Query: 518 PPWPRQRVQGGSQGASGE----DLRGEGLELHLC-------VQVPHPLRRRQVXXXXXXX 372
           P +   +V+   QG  GE    DLR E L+             VP               
Sbjct: 29  PAYTHLKVRQSGQGTEGEAARRDLRAELLQAEAAHFAKKNGAPVPEASAESTPKRQLEGA 88

Query: 371 XXXRGRQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRK 198
               G  E+    +A + R   + RE+    +  EE   ED    ED+      E+ K
Sbjct: 89  PANGGDGELEEDPEAKRRRILEETREIDADSEASEEDSSEDESDDEDEAAELMRELEK 146

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>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)|
          Length = 399

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = -1

Query: 637 PRASAAVMADAKTAPAVTLRTRKFMTNR---LLSRKQFVLEVIHPGRANVSKADLK-ERL 470
           PR S  V+  A  +P +   T+KFM +    L+ R +  LE I     NV K + K + L
Sbjct: 197 PRTSQVVVVSATMSPEILEITKKFMNDPVKILVKRDEITLEGIKQYYVNVEKEEWKFDTL 256

Query: 469 AKIYE 455
             IY+
Sbjct: 257 CDIYD 261

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>YN23_CAEEL (P34582) Hypothetical protein T26G10.3 in chromosome III|
          Length = 91

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 532 VLEVIHPGRANVSKADLKERLAKIYEV 452
           V EVI PGR    KAD++E++A  Y +
Sbjct: 2   VAEVILPGRPTTLKADIREKIANFYNI 28

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>ZBT17_HUMAN (Q13105) Zinc finger and BTB domain-containing protein 17 (Zinc|
           finger protein 151) (Myc-interacting zinc finger
           protein) (Miz-1 protein)
          Length = 803

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -3

Query: 341 AQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKDS 192
           A+ +A    +S Q+ EV  A +GEEEQ +++   QE++G G  E   + S
Sbjct: 208 AEAEAALSESSEQEMEVEPARKGEEEQKEQE--EQEEEGAGPAEVKEEGS 255

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>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1263

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 13/46 (28%), Positives = 30/46 (65%)
 Frame = -3

Query: 344 RAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEE 207
           +++V+A  E+ S ++ E  + ++ EEE+++E+   +ED+  G Q +
Sbjct: 340 KSEVEALAEQLSEEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSD 385

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>NUCKS_HUMAN (Q9H1E3) Nuclear ubiquitous casein and cyclin-dependent kinases|
           substrate (P1)
          Length = 243

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQG-EEEQDKED--PWSQEDKG 225
           + VR Q QA  + AS Q RE+   D G EEEQ++ED  P+ ++D G
Sbjct: 87  KNVRQQRQAASKAASKQ-REMLMEDVGSEEEQEEEDEAPFQEKDSG 131

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>RS24_ARCFU (O29151) 30S ribosomal protein S24e|
          Length = 110

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/96 (21%), Positives = 49/96 (51%)
 Frame = -1

Query: 559 NRLLSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFG 380
           N LL R++    +   G+   S+ +++ ++A +   +    +  +  +T FG  ++  + 
Sbjct: 14  NPLLRRREVYCRLSFEGKTP-SRKEVRGKIAGLMNAEPERVVVDY-IKTEFGKTEAKCYV 71

Query: 379 LIYDNLEAAKKFEPKYRLIRNGLATKIEKSRKQIKE 272
            IYD +E  +K E ++ + RN    K+E+  ++ +E
Sbjct: 72  KIYDTVEDLQKIEEEHIIERN----KVEEQAEEAEE 103

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>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked nuclear protein)
            (Heterochromatin protein 2) (HP1 alpha-interacting
            protein) (HP1-BP38 protein)
          Length = 2476

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -3

Query: 356  RQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQED 231
            R+ ++ Q  +  E  SH + +  + D+ +EE + ED   + D
Sbjct: 1412 RRRIKVQEDSSSENKSHSEEDKKEGDEEDEEDEDEDEEDEND 1453

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>PEX26_MOUSE (Q8BGI5) Peroxisome assembly protein 26 (Peroxin-26)|
          Length = 305

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = -3

Query: 347 VRAQVQADQER-----ASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKDS*LL 183
           VR+   ++++R     A H  R+    +  +E  D ++P     +G   Q+ +     L 
Sbjct: 178 VRSAAFSEEQRVEALQAIHLARQQHTQEHTQEHSDSQEPQKLRQEGSFSQKLLSLLMLLR 237

Query: 182 AAFSSICSQSVSVPFSKALCGNVAVCLI 99
             + S+ S  +S PF K L   + +CL+
Sbjct: 238 RLWGSVVSHLLSQPFRKGLLAALILCLL 265

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>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
            3.6.1.-)
          Length = 1173

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 24/73 (32%), Positives = 35/73 (47%)
 Frame = -3

Query: 326  DQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKDS*LLAAFSSICSQSVS 147
            DQER + + RE      GEE +D+E+    E K    +E+  K   +L+A  S  +Q   
Sbjct: 955  DQERDAARMRERRTYKTGEEGEDEEE--KDEKKNEQAEEQFNK---VLSAVQSTSAQLPG 1009

Query: 146  VPFSKALCGNVAV 108
            VP    L G + V
Sbjct: 1010 VPKGIDLDGKITV 1022

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>IE68_SHV21 (Q01042) Immediate-early protein|
          Length = 407

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = -3

Query: 359 GRQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEE 207
           G +E   + +A++E A  ++ E  +A++ EEE ++E+    E +    +EE
Sbjct: 86  GGEEGEGREEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEE 136

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>IF2_NITOC (Q3J9B6) Translation initiation factor IF-2|
          Length = 845

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRKDS 192
           +E +A VQA QER +    E     Q  EE+ K     +E K    +EE ++ +
Sbjct: 118 EEAQAGVQAQQEREARLIAEEEAKRQAAEEEAKRQAAEEEAKRQAAEEEAKRQA 171

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>ARGB_LEPIN (P59299) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 294

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
 Frame = -1

Query: 568 FMTNRLLSRKQFVLE-------------VIHPGRANVSKADLKERLAKIYEVKDSNCIFV 428
           F+  +LL R  ++LE             VI  G A ++KADLKE  AK  ++     + +
Sbjct: 2   FLMEKLLERVNYILEALPYITQYSGKTVVIKYGGAAMAKADLKESFAK--DIVLLKYVGI 59

Query: 427 FKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIE-----KSRKQI 278
                H GG +      + DNL+   +F   +R+  N     +E     K  KQI
Sbjct: 60  HPVIVHGGGPE---INRLLDNLKIPTEFVHGHRVTDNQTMEIVEMVLTGKVNKQI 111

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>ARGB_LEPIC (Q75FU1) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 294

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
 Frame = -1

Query: 568 FMTNRLLSRKQFVLE-------------VIHPGRANVSKADLKERLAKIYEVKDSNCIFV 428
           F+  +LL R  ++LE             VI  G A ++KADLKE  AK  ++     + +
Sbjct: 2   FLMEKLLERVNYILEALPYITQYSGKTVVIKYGGAAMAKADLKESFAK--DIVLLKYVGI 59

Query: 427 FKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYRLIRNGLATKIE-----KSRKQI 278
                H GG +      + DNL+   +F   +R+  N     +E     K  KQI
Sbjct: 60  HPVIVHGGGPE---INRLLDNLKIPTEFVHGHRVTDNQTMEIVEMVLTGKVNKQI 111

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>NUCKS_MOUSE (Q80XU3) Nuclear ubiquitous casein and cyclin-dependent kinases|
           substrate (JC7)
          Length = 234

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQGEEEQDKED---PWSQEDKG 225
           + VR Q QA  + AS Q RE+   D G EE+ +ED   P+ ++D G
Sbjct: 87  KNVRQQRQAASKAASKQ-REMLLEDVGSEEEPEEDDEAPFQEKDSG 131

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>NUCKS_RAT (Q9EPJ0) Nuclear ubiquitous casein and cyclin-dependent kinases|
           substrate
          Length = 243

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -3

Query: 353 QEVRAQVQADQERASHQDREVTQADQGEEEQDKED---PWSQEDKG 225
           + VR Q QA  + AS Q RE+   D G EE+ +ED   P+ ++D G
Sbjct: 87  KSVRQQRQAASKAASKQ-REMLLEDVGSEEEPEEDDEAPFQEKDSG 131

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>YSNA_STRPR (P54992) Hypothetical 45.4 kDa protein in snaA-snaB intergenic|
           region (ORF401)
          Length = 402

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
 Frame = -1

Query: 652 CEEE---APRASAAVMADAKTAPAVTLRTRKFMTNRLLSRK------QFVLEVIHPGRAN 500
           CE+    AP  +AAV  DA     VTL T + +TN    R+      +   +V    + +
Sbjct: 171 CEDTITPAPATTAAVGIDAGITSLVTLSTGEKITNPKHERRDRARLAKAQRDVSRKAKGS 230

Query: 499 VSKADLKERLAKIY-EVKDSNCIFVFKFRT 413
            ++   + ++A+++  + D  C F+ K  T
Sbjct: 231 ANRKKARRKVARVHARITDRRCDFLHKLST 260

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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel|
           [Contains: Glutamic acid-rich protein (GARP);
           Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
           (CNG-4) (Cyclic nucleotide-gated cation channel
           modulatory subunit)]
          Length = 1394

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
 Frame = -3

Query: 521 DPPWPRQRVQGGS--------QGASGEDLRGEGLELHLCVQVPHPLRRRQVXXXXXXXXX 366
           DP W     Q GS        + A  ++ +G+ +E     Q P  L R Q          
Sbjct: 310 DPHWEEDEHQEGSTSTSPRTSEAAPADEEKGKVVE-----QTPRELPRIQE--------- 355

Query: 365 XRGRQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDKGWGCQEEMRK 198
               +E   + + D E    + RE  + ++GEE++++E    +E++G   +EE R+
Sbjct: 356 ---EKEDEEEEKEDGEEEEEEGRE-KEEEEGEEKEEEEGREKEEEEGEKKEEEGRE 407

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>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -3

Query: 359 GRQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQEDK 228
           GR+E + +V  ++E  + ++ E T  D GEEE D ++   +E++
Sbjct: 28  GRKERKKEVVEEEENGAEEEEEETAED-GEEEDDGDEEDEEEEE 70

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>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1748

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = -1

Query: 493 KADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYR-LIRN 317
           K D+  R+ +  +V DS     F  RTHF   K + +GL ++  E  +  +  Y   + +
Sbjct: 503 KKDVYRRIVES-DVGDS-----FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGS 556

Query: 316 GLATKIEKSRKQIKE----RKNRTKKIRGV 239
            LA +I K+ K+++      KNR +++  V
Sbjct: 557 WLAIRIGKNHKEVERGIIPNKNRAEQLASV 586

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>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248|
           antigen)
          Length = 765

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 305 QDREVTQADQGEEEQDKEDPWSQEDKGW 222
           QD      D GEE +D+E+PW   D  W
Sbjct: 362 QDLRDELLDDGEEGEDEEEPWEDFDGTW 389

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>O10S1_HUMAN (Q8NGN2) Olfactory receptor 10S1|
          Length = 322

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = +3

Query: 162 TDRTESSQQSRIFPHFFLASPAFVFLTPRIFFVLFFLSLICLRDFSILVASPFLISLYLG 341
           T  TE+  Q+ +  HFFL    +      +FF+LF L       +SI VA   LI L +G
Sbjct: 2   TMTTENPNQT-VVSHFFLEGLRYTAKHSSLFFLLFLLI------YSITVAGNLLILLTVG 54

Query: 342 SN 347
           S+
Sbjct: 55  SD 56

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>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)|
          Length = 381

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 356 RQEVRAQVQADQERASHQDREVTQADQGEEEQDKEDPWSQED 231
           R EV  QVQ++   A+  D +  + D  +++ D ED   QE+
Sbjct: 205 RSEVLTQVQSELASANTDDEDGEEDDDDDDDDDDEDDDEQEE 246

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>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = -1

Query: 493 KADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYR-LIRN 317
           K D+  R+ +  +V DS     F  RTHF   K + +GL ++  E  +  +  Y   + +
Sbjct: 503 KKDVYRRIVES-DVGDS-----FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGS 556

Query: 316 GLATKIEKSRKQIKE----RKNRTKKIRGV 239
            LA +I K+ K+++      KNR +++  V
Sbjct: 557 WLAIRIGKNHKEVERGIIPNKNRAEQLASV 586

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>ZO1_CANFA (O97758) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1769

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = -1

Query: 493 KADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLEAAKKFEPKYR-LIRN 317
           K D+  R+ +  +V DS     F  RTHF   K + +GL ++  E  +  +  Y   + +
Sbjct: 502 KKDVYRRIVES-DVGDS-----FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGS 555

Query: 316 GLATKIEKSRKQIKE----RKNRTKKIRGV 239
            LA +I K+ K+++      KNR +++  V
Sbjct: 556 WLAIRIGKNHKEVERGIIPNKNRAEQLASV 585

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>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)|
          Length = 542

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
 Frame = -3

Query: 338 QVQADQERASHQDREVTQADQGEEEQDKEDP--------W--SQEDKGWGCQEEMRKD 195
           +V+ ++E  S  + E  + ++GEEE++ E+P        W   +ED+  G +EE  ++
Sbjct: 374 EVELEREGWSEDEEEGEEEEEGEEEEEDEEPGYGDRYEDWETDEEDESLGEEEEEEEE 431

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>OXAA_HELPJ (Q9ZJG8) Inner membrane protein oxaA|
          Length = 549

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 13  QNTSSKNQVSNTNQHTGDDVKAQNSLFY*IKHTATLPQRALLKGTDTDCEQIEL 174
           + T+   +   TN HT     A N++      T T+PQ +LL     +  +IE+
Sbjct: 34  KTTTETTKQETTNNHTATSPTASNTITQDFSVTQTIPQESLLSTISFEHAKIEI 87

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>LIPB_YEAST (Q06005) Lipoate-protein ligase, mitochondrial precursor (EC|
           6.-.-.-) (Lipoate biosynthesis protein) (Lipoyl ligase)
          Length = 328

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -1

Query: 550 LSRKQFVLEVIHPGRANVSKADLKERLAKIYEVKDSNCIFVFKFRTHFGGGKSTGFGLIY 371
           + RK   L+  + G A ++  + K  L K+  +K +  I  F+F   + GGK     +  
Sbjct: 77  IERKLIQLDEEYKGTATINDNE-KRILDKVMAMKPNPIILTFEFEPTYTGGKRIKKTMTP 135

Query: 370 DNLEAAKKFEPK 335
           D + A + F P+
Sbjct: 136 DQIAAYESFIPE 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,558,505
Number of Sequences: 219361
Number of extensions: 1409976
Number of successful extensions: 7338
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 6108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7026
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result