>DNJ10_ARATH (Q8GYX8) Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)|
          Length = 398

 Score =  148 bits (374), Expect = 1e-35
 Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
 Frame = -1

Query: 646 AAFGEAMLHTVGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALM 467
           AA+G  ML+T+GYIYVRQA++ELGK  +Y+GVPFIAEW R+KGH IKSQ+ AA+GA AL 
Sbjct: 172 AAYGVDMLNTIGYIYVRQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQLTAATGAYALF 231

Query: 466 QLQDGMKKV--EEGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDST 293
           QLQ+ MK+    EG   EE+L +  +  K  M++SLWK+NV DIE+TL RVCQ VL+D  
Sbjct: 232 QLQEEMKRQLNTEGNYTEEELEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPE 291

Query: 292 VSKDVXXXXXXXXXXXGTIFQGAKSLYHRENSLRVESPMEGEGTTSSH 149
             ++            G IFQ AK+     + L    P +  G   +H
Sbjct: 292 AKREELRTRARGLKALGRIFQRAKTA-SESDPLENSEPQKLNGNGKNH 338

>YIS4_YEAST (P40564) Hypothetical 48.6 kDa protein in BET1-PAN1 intergenic|
           region
          Length = 432

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
 Frame = -1

Query: 643 AFGEAMLHTVGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQ 464
           +FG  +LHT+G +Y  +A   L    L+ G+  I   ++ KG      +   S AI    
Sbjct: 251 SFGLDILHTIGDVYYEKAEIFLASQNLF-GMGGIFHSMKAKGGVFMDTLRTVSAAIDAQN 309

Query: 463 LQDGMKKVEEGANKEE---------QLMKSFEEKKEA-------MLNSLWKINVVDIEST 332
               ++K++E +   E         Q+  + EE  +        +L++ W  +  +I ST
Sbjct: 310 TMKELEKMKEASTNNEPLFDKDGNEQIKPTTEELAQQEQLLMGKVLSAAWHGSKYEITST 369

Query: 331 LSRVCQAVLKDSTVSK 284
           L  VC+ VL+D +VSK
Sbjct: 370 LRGVCKKVLEDDSVSK 385

>CAJ1_YEAST (P39101) Protein CAJ1|
          Length = 391

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 26/118 (22%), Positives = 50/118 (42%)
 Frame = -1

Query: 643 AFGEAMLHTVGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQ 464
           +FG  +L+ +  +Y  +A+  +   K Y G+  I    RD   ++KS  +  S  +   +
Sbjct: 221 SFGLELLYLLARVYKTKANNFIMSKKTY-GISKIFTGTRDNARSVKSAYNLLSTGLEAQK 279

Query: 463 LQDGMKKVEEGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDSTV 290
             + M +V      + +  K         L  +W ++  ++E  L  VC  +L D  V
Sbjct: 280 AMEKMSEVNTDELDQYERAKFESTMAGKALGVMWAMSKFELERKLKDVCNKILNDKKV 337

>YAY1_SCHPO (Q10209) Hypothetical J-domain protein C4H3.01 in chromosome I|
          Length = 392

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
 Frame = -1

Query: 643 AFGEAMLHTVGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQ 464
           +FG  +LH +G +Y ++    L  SK   G+      +++KG   ++     S A+    
Sbjct: 219 SFGVEILHAIGEVYTQKGRTVLKSSK--FGIGGFWSRMKEKGKIARATWDTVSAAMDAKL 276

Query: 463 LQDGMKKVEEGANKE---EQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLK 302
             D M+K+E+    +   E+  K   +    +L + W     DI+  L   C  +LK
Sbjct: 277 SIDQMQKLEDKGEDQASAEERAKLELDITGKILRASWCGARYDIQGVLREACSNLLK 333

>TATB_YERPE (Q8ZAM3) Sec-independent protein translocase protein tatB homolog|
          Length = 220

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -1

Query: 580 LGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQLQDGMKKVEEGA--NKEEQLM 407
           LG  +L + V  ++ W+R       +  +  +  + L +LQD +KKVE+    N   +L 
Sbjct: 20  LGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQDSLKKVEQAGLQNLTPELK 79

Query: 406 KSFEEKKEA 380
            S +E KEA
Sbjct: 80  ASMDELKEA 88

>GNL3_DROME (Q8MT06) Guanine nucleotide-binding protein-like 3 homolog|
           (Nucleostemin homolog)
          Length = 581

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
 Frame = -1

Query: 601 VRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAA---SGAIALMQLQDGM----KK 443
           V +A +     +L     F AE  ++K  T++S V  A   S    +M   D      KK
Sbjct: 67  VEEAKQRQEAERLARREAFKAEREQNKFKTLESMVEDADMRSTVHGIMHENDAQDQDEKK 126

Query: 442 VEEGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAV 308
            +    KE+ L + F+E ++ + N+   + VVD    L   C  V
Sbjct: 127 YKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARDPLGTRCNEV 171

>PUR8_HAEIN (P44797) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL)
          Length = 456

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = -1

Query: 616 VGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQLQDGMKKVE 437
           +GY  +  AS   G SKL +  P + E +      +   +        + +  + +K++ 
Sbjct: 350 LGYCLIAYASTRKGISKLEVNQPHLLEELNQNWEVLAEPIQTVMRRYGIEKPYEKLKELT 409

Query: 436 EGANKEEQLMKSFEEK 389
            G    EQ M+ F +K
Sbjct: 410 RGKRVTEQAMREFIDK 425

>SH3G2_MOUSE (Q62420) SH3-containing GRB2-like protein 2 (EC 2.3.1.-) (SH3|
           domain protein 2A) (Endophilin 1) (SH3p4)
          Length = 352

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -1

Query: 466 QLQDGMKKVEEGANKEEQL---MKSFEEKKEAMLNSLWKINVVDIE--STLSRVCQAVLK 302
           +L  G KK  +G   +E+L   ++ F+E KE   +S++ +  +DIE  S LS + QA L+
Sbjct: 165 RLDFGYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLE 224

>ZN678_HUMAN (Q5SXM1) Zinc finger protein 678|
          Length = 525

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +2

Query: 35  GKHTYRCVESKPAVPQYYKQTI---IHRDPNNSQIVKCQSSVRRCRSLPFHRRFH 190
           G+  Y+C E   A  Q+   T    IH      Q  +C  +  RC  L  H+R H
Sbjct: 289 GEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIH 343

>IF2_CHLCV (Q823F2) Translation initiation factor IF-2|
          Length = 887

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
 Frame = -1

Query: 529 RDKGHTIKSQVHAASGAIALMQLQDG-------------MKKVEEGANKEEQLMKSFEEK 389
           R +G  I+S++H   GA+A + +Q+G               KV+   N+  QLMKS    
Sbjct: 568 RARGLVIESELHKGLGAVATILVQNGTLHLGEALVFNDCYGKVKTMHNEHNQLMKSASPS 627

Query: 388 KEAMLNSL 365
             A++  L
Sbjct: 628 IPALITGL 635

>CH60_BACHD (O50305) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
 Frame = -1

Query: 640 FGEAMLHTVGYIYVRQASRELGKSKLYMGVPFIAEWVRDKGHTIKSQVHAASGAIALMQL 461
           FG  ++   G    ++   EL  +   MG   +AE V  K + I       +  +A   +
Sbjct: 43  FGSPLITNDGVTIAKEI--ELEDAFENMGAKLVAE-VASKTNDIAGDGTTTATVLAQAMI 99

Query: 460 QDGMKKVEEGANKEEQLMKSFEEKKEAMLNSLWKIN-VVDIESTLSRVCQAVLKDSTVSK 284
           ++G+K V  GAN    + K  E+  +  +  L KI+  ++ + ++++V      D  V K
Sbjct: 100 REGLKNVTSGAN-PMVIRKGIEKATQVAVEELSKISKPIEGKDSIAQVAAISSADDEVGK 158

>HRPA_PSESY (Q52420) Hrp pili protein hrpA (TTSS pilin hrpA)|
          Length = 108

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 457 DGMKKVEEGANKEEQLMKSFEEKKEAMLNSL 365
           DG    E G  +E  ++  FE+KKEA+ N +
Sbjct: 66  DGTANEENGLLRESSMLAGFEDKKEALSNQI 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,204,773
Number of Sequences: 219361
Number of extensions: 1863120
Number of successful extensions: 5526
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)