>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1)
          Length = 676

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 167 SDMFLNSHCMEGRKMIFSVAGFTDLRTGCS*VHYVCRCMYFLCQSE 30
           S + LN HC++     F +A    L  G    H +  C+Y +C++E
Sbjct: 98  SQLQLNQHCLDTAFNFFKMAVSKHLTRGRKMAHVIAACLYLVCRTE 143

>TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1) (hBRF) (TATA
           box-binding protein-associated factor, RNA polymerase
           III, subunit 2) (TAF3B2)
          Length = 677

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 155 LNSHCMEGRKMIFSVAGFTDLRTGCS*VHYVCRCMYFLCQSE 30
           LN HC++     F +A    L  G    H +  C+Y +C++E
Sbjct: 102 LNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTE 143

>HEMA_MEASI (P26028) Hemagglutinin glycoprotein|
          Length = 617

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 211 PFLLSVEAVPFTCQVECFAMSLSTW 285
           PF L ++ VP   QVECF      W
Sbjct: 554 PFRLPIKGVPIELQVECFTWDQKLW 578

>HEMA_MEASH (P06830) Hemagglutinin glycoprotein|
          Length = 617

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 211 PFLLSVEAVPFTCQVECFAMSLSTW 285
           PF L ++ VP   QVECF      W
Sbjct: 554 PFRLPIKGVPIELQVECFTWDQKLW 578

>HEMA_MEASE (P08362) Hemagglutinin glycoprotein|
          Length = 617

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 211 PFLLSVEAVPFTCQVECFAMSLSTW 285
           PF L ++ VP   QVECF      W
Sbjct: 554 PFRLPIKGVPIELQVECFTWDQKLW 578

>HEMA_MEASA (P35971) Hemagglutinin glycoprotein|
          Length = 617

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 211 PFLLSVEAVPFTCQVECFAMSLSTW 285
           PF L ++ VP   QVECF      W
Sbjct: 554 PFRLPIKGVPIELQVECFTWDQKLW 578

>HEMA_MEASY (P28081) Hemagglutinin glycoprotein|
          Length = 620

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 211 PFLLSVEAVPFTCQVECFAMSLSTW 285
           PF L +  VP   QVECF      W
Sbjct: 554 PFRLPIRGVPIELQVECFTWDQKLW 578


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,957,315
Number of Sequences: 219361
Number of extensions: 736438
Number of successful extensions: 1465
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)