ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29f18 |
|---|---|
| Clone Library Name | barley_pub |
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 328 bits (841), Expect = 1e-89 Identities = 167/188 (88%), Positives = 175/188 (93%), Gaps = 1/188 (0%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DEDQAY KIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YML Sbjct: 75 DEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYML 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGK Sbjct: 135 RLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPG 202 EIEKATSSIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP DE + G Sbjct: 195 EIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG 254 Query: 201 AEEVAAAE 178 +EVAAAE Sbjct: 255 -QEVAAAE 261
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 303 bits (777), Expect = 3e-82 Identities = 151/186 (81%), Positives = 165/186 (88%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DED +Y KIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ L Sbjct: 75 DEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 RMF IGFTK+R NQVKRTCYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+ Sbjct: 135 RMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGR 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGA 199 EIEKATSSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP +E P A Sbjct: 195 EIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEA 253 Query: 198 EEVAAA 181 EV A Sbjct: 254 TEVIGA 259
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 302 bits (774), Expect = 6e-82 Identities = 148/185 (80%), Positives = 163/185 (88%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DED ++ KIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y L Sbjct: 75 DEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 RMF IGFTK+R NQ KRTCYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+ Sbjct: 135 RMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGR 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGA 199 EIEKATSSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP + V Sbjct: 195 EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPT 254 Query: 198 EEVAA 184 E + A Sbjct: 255 EVIGA 259
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 296 bits (758), Expect = 4e-80 Identities = 148/187 (79%), Positives = 161/187 (86%), Gaps = 1/187 (0%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DED AY KIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y L Sbjct: 75 DEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 RMF I FTKRR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+ Sbjct: 135 RMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGR 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPG 202 EIEKAT I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRP + ++ Sbjct: 195 EIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEE 254 Query: 201 AEEVAAA 181 E+ A Sbjct: 255 PTEIIGA 261
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 288 bits (737), Expect = 1e-77 Identities = 148/188 (78%), Positives = 162/188 (86%), Gaps = 2/188 (1%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DEDQAY KIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY L Sbjct: 75 DEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPEVIG 382 R+F I FTKRR NQVKRTCYAQ+SQIRQIR KM EIM+ +A+SCDLKELV KFIPE IG Sbjct: 135 RLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIG 194 Query: 381 KEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIP 205 K+IEKAT I+PLQNV++RKVKILKAPKFDL KLMEVHGDY EDVGVK+DRP DEV+ Sbjct: 195 KDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVE 253 Query: 204 GAEEVAAA 181 E+ A Sbjct: 254 EPTEIIGA 261
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 248 bits (634), Expect = 1e-65 Identities = 126/169 (74%), Positives = 145/169 (85%), Gaps = 1/169 (0%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DEDQA+ KI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY + Sbjct: 74 DEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQI 133 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F I FTK+RPN R YAQ+SQI IRRKM EIMV +A +CDLKELV KFIPEVIGK Sbjct: 134 RIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGK 191 Query: 378 EIEK-ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 235 EI++ + I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+ Sbjct: 192 EIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 224 bits (570), Expect = 3e-58 Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 9/184 (4%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTKRR NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRP 226 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERA 254 Query: 225 DGDE 214 DG E Sbjct: 255 DGYE 258
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 223 bits (567), Expect = 6e-58 Identities = 108/184 (58%), Positives = 141/184 (76%), Gaps = 9/184 (4%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQV++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK Sbjct: 135 RLFCVGFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRP 226 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERA 254 Query: 225 DGDE 214 DG E Sbjct: 255 DGYE 258
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 222 bits (565), Expect = 1e-57 Identities = 107/185 (57%), Positives = 141/185 (76%), Gaps = 10/185 (5%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK Sbjct: 135 RLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVKLDR 229 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ + D G K++R Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVER 254 Query: 228 PDGDE 214 DG E Sbjct: 255 ADGYE 259
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 222 bits (565), Expect = 1e-57 Identities = 107/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 221 bits (563), Expect = 2e-57 Identities = 107/182 (58%), Positives = 140/182 (76%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 221 bits (563), Expect = 2e-57 Identities = 107/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 221 bits (562), Expect = 2e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 72 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 131 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 132 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 191 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 192 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 251 Query: 219 DE 214 E Sbjct: 252 YE 253
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 221 bits (562), Expect = 2e-57 Identities = 106/182 (58%), Positives = 140/182 (76%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KMVEIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 221 bits (562), Expect = 2e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 221 bits (562), Expect = 2e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 221 bits (562), Expect = 2e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 220 bits (561), Expect = 3e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 220 bits (561), Expect = 3e-57 Identities = 106/182 (58%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDG 220 +IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 220 bits (560), Expect = 4e-57 Identities = 107/168 (63%), Positives = 136/168 (80%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DE+ A+ K++LR ED+QG + LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Y+ Sbjct: 75 DEEHAFRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLC 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F IGFT+RR NQVK+T YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+ Sbjct: 135 RVFVIGFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGR 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 235 EIE+AT SIFPLQNV VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 195 EIERATGSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 241
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 219 bits (559), Expect = 5e-57 Identities = 105/182 (57%), Positives = 141/182 (77%), Gaps = 7/182 (3%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ A+ K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+L Sbjct: 75 NDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK Sbjct: 135 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDG 220 ++EKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 195 DMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 254 Query: 219 DE 214 E Sbjct: 255 YE 256
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 219 bits (558), Expect = 7e-57 Identities = 104/177 (58%), Positives = 144/177 (81%), Gaps = 1/177 (0%) Frame = -2 Query: 735 EDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLR 556 ED +Y KI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR Sbjct: 76 EDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLR 135 Query: 555 MFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 376 +FAI FTKR+PNQ+K T YAQ+S++R+ R+KM+EI+ + ++C L +L +K IPEVIG+E Sbjct: 136 VFAIAFTKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGRE 195 Query: 375 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 208 IEK+T +IFPLQNV++RKVK+LK PKFD G L+ +HG+ E+ G K+ D V+ Sbjct: 196 IEKSTQTIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 214 bits (545), Expect = 2e-55 Identities = 104/168 (61%), Positives = 135/168 (80%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 DE+ ++ K++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Y+ Sbjct: 75 DEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLC 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F IGFT RR NQVK+T YAQ+SQIR I +KM +++ NQA C +KELV K IPEVIG+ Sbjct: 135 RIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGR 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 235 IEKAT++I+PLQNV+VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 195 AIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 241
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 214 bits (545), Expect = 2e-55 Identities = 106/183 (57%), Positives = 140/183 (76%), Gaps = 8/183 (4%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 +++ + K +L AE+VQG NVLTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Y+L Sbjct: 75 NDEVTFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLL 134 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+FAIGFTK+R NQVK+TCYAQ +Q++ IR+KMVEI+ + +S D+KE+VNK IP+ IGK Sbjct: 135 RVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGK 194 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPD 223 +IEK+ I+PL +V + KVK+LK PKFD+GKLME+HG+ + G K+DR D Sbjct: 195 DIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVD 254 Query: 222 GDE 214 G E Sbjct: 255 GYE 257
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 206 bits (523), Expect = 8e-53 Identities = 98/158 (62%), Positives = 128/158 (81%) Frame = -2 Query: 735 EDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLR 556 ED ++ K++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR Sbjct: 76 EDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLR 135 Query: 555 MFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 376 +FAI FT+++ NQVKR YAQ+S IR IR+ + EI+ + + L +L +K IPEVI KE Sbjct: 136 IFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKE 195 Query: 375 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 262 IE AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 196 IENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 206 bits (523), Expect = 8e-53 Identities = 99/158 (62%), Positives = 127/158 (80%) Frame = -2 Query: 735 EDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLR 556 ED ++ KI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR Sbjct: 76 EDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLR 135 Query: 555 MFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 376 +FAI FT+++ NQVKR YAQ+S IR IR+ + EI+ + L +L +K IPEVI KE Sbjct: 136 IFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKE 195 Query: 375 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 262 IE AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 196 IENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 195 bits (495), Expect = 1e-49 Identities = 95/183 (51%), Positives = 128/183 (69%), Gaps = 8/183 (4%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D ++++ K RL AEDVQ NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+L Sbjct: 78 DPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLL 137 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F IGFT + ++TCYAQ SQ+R+IR +M +I+ N+ + DLK+LVNK + I K Sbjct: 138 RVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAK 197 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPD 223 +IEK+ I+PL +VY+RKVK+LK P+FD+ KL+E+HGD G +DRP+ Sbjct: 198 DIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPE 257 Query: 222 GDE 214 G E Sbjct: 258 GYE 260
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 189 bits (481), Expect = 6e-48 Identities = 96/172 (55%), Positives = 123/172 (71%), Gaps = 2/172 (1%) Frame = -2 Query: 723 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 544 + K +L AEDVQG NVLTNF M T DKL S+V+KW TLIEA+ VKTTD Y LR+F I Sbjct: 78 FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 137 Query: 543 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 364 FTK+ NQVK+T Y + S+IR+IR +M+ + + CDLKE+V+K IP+ IGK+IEK Sbjct: 138 AFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKT 197 Query: 363 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 214 S ++PLQ VY+RKVKI+K PK DLG+L ++HGD G K+DRPD E Sbjct: 198 CSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 186 bits (471), Expect = 9e-47 Identities = 90/159 (56%), Positives = 116/159 (72%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D ++++ K +L AE V G +VLTNF GM TTDKLRS+V KWQTLIE VDVKTTD +ML Sbjct: 78 DAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFML 137 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+F IGFT + ++TCYAQ SQI+ IR KM I+ + S DLK +V K +P+ I K Sbjct: 138 RVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK 197 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 262 +IEKA ++PL +VY+RKVK+LK P+FDL LME+HGD Sbjct: 198 DIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 236
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 84.0 bits (206), Expect = 5e-16 Identities = 49/147 (33%), Positives = 76/147 (51%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D +++ K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y L Sbjct: 58 DFTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKL 117 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+ A+ RR Q SQ R IR+ M EI+ +A + K+ V + + I Sbjct: 118 RVMAMAIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAA 168 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPK 298 EI K I+PL+ +RK+K+L+ P+ Sbjct: 169 EIAKEAKKIYPLRKAEIRKIKVLEEPQ 195
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 81.6 bits (200), Expect = 2e-15 Identities = 49/147 (33%), Positives = 74/147 (50%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y L Sbjct: 60 DFTKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRL 119 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+ A+ RR Q SQ R IR+ M EI+ +A + K+ V + + I Sbjct: 120 RVMAMAIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAA 170 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPK 298 EI K I+PL+ +RK+K+L P+ Sbjct: 171 EIAKEGKKIYPLKKAEIRKIKVLGEPE 197
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 80.5 bits (197), Expect = 5e-15 Identities = 48/144 (33%), Positives = 73/144 (50%) Frame = -2 Query: 729 QAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMF 550 + + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ Sbjct: 62 KGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVM 121 Query: 549 AIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIE 370 A+ RR Q SQ R IR+ M EI+ +A + K+ V + + I EI Sbjct: 122 AMVIAARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIA 172 Query: 369 KATSSIFPLQNVYVRKVKILKAPK 298 K I+PL+ +RK+K+L P+ Sbjct: 173 KEAKKIYPLKKAEIRKIKVLGEPE 196
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 79.3 bits (194), Expect = 1e-14 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 4/150 (2%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D Y + Sbjct: 51 DITKHHIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKV 110 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PE 391 R+ + FT RR A+ SQ R IR++M +++ A CD E + + + E Sbjct: 111 RVAGLAFTTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEE 161 Query: 390 VIGKEIEKATSSIFPLQNVYVRKVKILKAP 301 I ++I++A I+P++ +RK ++L+ P Sbjct: 162 SIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/139 (28%), Positives = 75/139 (53%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K++ + V+G+ LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 T R +++ +R+KM+E +V +AA D + + + + + ++ Sbjct: 134 TTHRIGTAQKSA---------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAK 184 Query: 357 SIFPLQNVYVRKVKILKAP 301 I P++ V + K+K+LK P Sbjct: 185 KIAPMRKVEIAKIKVLKYP 203
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 78.6 bits (192), Expect = 2e-14 Identities = 47/141 (33%), Positives = 74/141 (52%) Frame = -2 Query: 723 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 544 Y K+ + V G N T FW + T + L SL R+ + IE VDV T D Y LR+ ++ Sbjct: 66 YKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSV 125 Query: 543 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 364 FT RR + SQ R IR M +I+V +A+S + + + + + + EI K Sbjct: 126 VFTVRR---------CKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKN 176 Query: 363 TSSIFPLQNVYVRKVKILKAP 301 I+P++ V +RK+++L P Sbjct: 177 AKKIYPIRRVEIRKIELLAEP 197
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 78.6 bits (192), Expect = 2e-14 Identities = 47/139 (33%), Positives = 78/139 (56%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDVKT D Y++R+ F Sbjct: 65 KVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCF 124 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 T +R A++SQ++ IR MVEI+ +AA D + + + I + I + Sbjct: 125 TIKR---------ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAK 175 Query: 357 SIFPLQNVYVRKVKILKAP 301 I+PL+ V +RK ++ P Sbjct: 176 FIYPLRRVEIRKTEVETIP 194
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 73.9 bits (180), Expect = 5e-13 Identities = 47/146 (32%), Positives = 72/146 (49%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D Y + R V+G +LT F G + + D +RSLVR+ + I+A DV T D Y+L Sbjct: 56 DYSLVYVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVL 115 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+ + T R A SQ +IR+ + I+ +A+ E V + + Sbjct: 116 RVKGLALTTYR---------AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSN 166 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAP 301 +I + I+PL+ V V K K+LKAP Sbjct: 167 DIFQQAKKIYPLRKVEVEKTKLLKAP 192
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 73.6 bits (179), Expect = 6e-13 Identities = 43/139 (30%), Positives = 78/139 (56%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDV+T D +++R+ F Sbjct: 65 KVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCF 124 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 T +R A++SQ++ IR MV+I+ +A+ D + + + I + I + Sbjct: 125 TIKR---------ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAK 175 Query: 357 SIFPLQNVYVRKVKILKAP 301 I+PL+ V +RK ++ P Sbjct: 176 FIYPLRRVEIRKTQVEAMP 194
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 72.0 bits (175), Expect = 2e-12 Identities = 43/146 (29%), Positives = 75/146 (51%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + Y K++ + + V G T F G TTD +RS++R+ + ++A V V+T D Y L Sbjct: 58 DFSKQYVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKL 117 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 ++ + T RR A++SQ + +R+ + E + A+ +ELV + I Sbjct: 118 KVHPLAITIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIAS 168 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAP 301 EI I+PL+ V + K ++L+ P Sbjct: 169 EIYHQAKKIYPLKRVEIIKSRVLEEP 194
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 70.9 bits (172), Expect = 4e-12 Identities = 45/133 (33%), Positives = 68/133 (51%) Frame = -2 Query: 696 DVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQ 517 ++ G + T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + T R Sbjct: 73 NISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR--- 129 Query: 516 VKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQN 337 A SQ IR+ + +I +A D + V I + +I + I+PL+ Sbjct: 130 ------AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRK 183 Query: 336 VYVRKVKILKAPK 298 V + K K+LKAPK Sbjct: 184 VEIEKTKLLKAPK 196
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 70.9 bits (172), Expect = 4e-12 Identities = 43/146 (29%), Positives = 70/146 (47%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + + K+ + DV+G N T F G +RSLVR+ T ++ ++ T D Y L Sbjct: 62 DFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKL 121 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+ + RR Q SQ R IR+ + +I+ +A + + V + + I Sbjct: 122 RVMGMVIAYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIAS 172 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAP 301 EI K I+P++ VRK+K+L P Sbjct: 173 EIAKEARKIYPIKRAEVRKIKVLAEP 198
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 67.0 bits (162), Expect = 6e-11 Identities = 45/174 (25%), Positives = 83/174 (47%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + K+ + +V + T F + T D LRSLVR+ + +EA++ V TTD+Y + Sbjct: 55 DASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRV 114 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 ++ + T ++ A ASQ + IRR M++++ A ++L++ + + Sbjct: 115 QIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSS 165 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 217 I I+PL+ V ++K + P+ EV + E+ V +D D D Sbjct: 166 AIYGEAKDIYPLRRVEIKKTTLEARPE-------EVAAE--EETAVDVDEEDVD 210
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 66.2 bits (160), Expect = 1e-10 Identities = 42/155 (27%), Positives = 78/155 (50%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D Q Y + + +G ++T F G + + D LRSL+R+ + I + DV T D Y++ Sbjct: 57 DFSQVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVV 116 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R+ + T + +Q ++T IR+ + E + +A+ + + + + Sbjct: 117 RVKGLVLTTYKCHQSQKTA---------IRKIINETVSKKASELSFDDFTQEVVFGRLAN 167 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLME 274 EI +A I+PL+ + K K+LK P+ +LGK +E Sbjct: 168 EIFEAAKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 59.7 bits (143), Expect = 9e-09 Identities = 38/140 (27%), Positives = 67/140 (47%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K+ + +DV + T F + T D RSLVR+ + + V V TTD+Y +R+ + + Sbjct: 61 KLTFQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAY 120 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 T ++ +Q SQ IRR M++++ + L+N I + I + Sbjct: 121 TTKQADQ---------SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEAN 171 Query: 357 SIFPLQNVYVRKVKILKAPK 298 +I+PL+ V V K + P+ Sbjct: 172 TIYPLRRVEVEKATLEAHPE 191
>RS3A_METJA (P54059) 30S ribosomal protein S3Ae| Length = 222 Score = 59.3 bits (142), Expect = 1e-08 Identities = 37/147 (25%), Positives = 72/147 (48%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + ++ + V G + ++G D T + ++S +R+ ++ I+A +DVKT D + + Sbjct: 65 DPTKHMHRVYFKIFGVTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKI 124 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 379 R A+ T R N +++ IR+KM EI+ A + V + + + Sbjct: 125 RTKAMVLTAYRANTKQKS---------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAE 175 Query: 378 EIEKATSSIFPLQNVYVRKVKILKAPK 298 +I+ IFP++NV + K ++L K Sbjct: 176 KIKNECKKIFPIKNVIIYKSEVLSLAK 202
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 57.4 bits (137), Expect = 5e-08 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 4/150 (2%) Frame = -2 Query: 738 DEDQAYXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 559 D + K+ + V+G T F G + D +R L R+ + + +V T D Y L Sbjct: 62 DYSYVHVKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGL 121 Query: 558 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PE 391 R+ A+ FT++R + SQ IR+ M EI+ +A L EL+ + Sbjct: 122 RVTAMAFTRQR---------CKTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEG 172 Query: 390 VIGKEIEKATSSIFPLQNVYVRKVKILKAP 301 + I+++ I+PL+ V + K K+L P Sbjct: 173 SLAYLIDESARKIYPLRKVEIAKSKLLWVP 202
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 55.5 bits (132), Expect = 2e-07 Identities = 40/150 (26%), Positives = 70/150 (46%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K R + +G T F G D +R LVR+ + I+ DVKT+DN ++ + + Sbjct: 66 KALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVV 125 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 T + K+ QIR+ + + ++N+ S E V I + I ++ AT Sbjct: 126 TDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATK 176 Query: 357 SIFPLQNVYVRKVKILKAPKFDLGKLMEVH 268 I+PL+ + VRK +++ L + E+H Sbjct: 177 DIYPLKKIEVRKSELV-----SLSGISEIH 201
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 45.4 bits (106), Expect = 2e-04 Identities = 38/177 (21%), Positives = 75/177 (42%) Frame = -2 Query: 717 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 538 K R +G T F G D +R LVR+ + I+ DVKT+D ++ + + Sbjct: 66 KALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVV 125 Query: 537 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 358 + + K++ +IR+ + +V++ + + V I + ++ +AT Sbjct: 126 SDGKLTNTKKS---------EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATK 176 Query: 357 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 187 +I+PL+ + +RK +L+ + G + P +E PG E +A Sbjct: 177 NIYPLRKIEIRK-----------SELVSLSG---------MQEPQKNEPAPGGEAIA 213
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 44.3 bits (103), Expect = 4e-04 Identities = 29/132 (21%), Positives = 59/132 (44%) Frame = -2 Query: 705 RAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 526 R ++ G T F G + D +R +VR+ + I+ + KT D Y L + + + + Sbjct: 69 RVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSK 128 Query: 525 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 346 KR ++R K++ + + S L EL I + + +I ++P Sbjct: 129 LTANKRG---------EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYP 179 Query: 345 LQNVYVRKVKIL 310 ++ + +RK ++L Sbjct: 180 IKKIEIRKSEVL 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,822,322 Number of Sequences: 219361 Number of extensions: 1834208 Number of successful extensions: 4981 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4959 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7706249192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
