ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29f14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472545.1| Oryza sativa (japonica cultivar-group), predic... 351 2e-93
2dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 2e-93
3emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 264 4e-67
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 264 4e-67
5gb|AY110636.1| Zea mays CL4177_1 mRNA sequence 264 4e-67
6dbj|AK105181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
7ref|XM_466685.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-04
8gb|AC146272.3| Pan troglodytes BAC clone RP43-29H6 from 7, compl... 44 0.63
9gb|AC142352.1| Pan troglodytes BAC clone RP43-21K18 from 7, comp... 44 0.63
10gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, comple... 44 0.63
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
12dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
13gb|AY105803.1| Zea mays PCO143734 mRNA sequence 44 0.63
14gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 42 2.5
15emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chr... 42 2.5
16gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, co... 40 9.9
17gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, co... 40 9.9
18ref|NM_103325.1| Arabidopsis thaliana adenyl-nucleotide exchange... 40 9.9
19ref|NM_179420.1| Arabidopsis thaliana adenyl-nucleotide exchange... 40 9.9
20gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosom... 40 9.9
21gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, com... 40 9.9
22gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, comple... 40 9.9
23gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, comple... 40 9.9
24emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in ... 40 9.9
25emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 o... 40 9.9
26emb|Z82189.1|HS170A21 Human DNA sequence from clone RP1-170A21 o... 40 9.9
27emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chr... 40 9.9
28gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3... 40 9.9
29emb|AL133341.12| Human DNA sequence from clone RP3-342O24 on chr... 40 9.9
30gb|AY270320.1| Homo sapiens clone SKT02-D7 putative promoter seq... 40 9.9
31gb|AY117176.1| Arabidopsis thaliana putative heat shock protein ... 40 9.9
32gb|AY065397.1| Arabidopsis thaliana putative heat shock protein ... 40 9.9
33gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complet... 40 9.9
34gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Can... 40 9.9
35emb|BX571977.7| Zebrafish DNA sequence from clone DKEY-9E15, com... 40 9.9
36gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 40 9.9
37gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cance... 40 9.9
38gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, com... 40 9.9
39emb|BX814493.1|CNS0AAR9 Arabidopsis thaliana Full-length cDNA Co... 40 9.9
40gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete... 40 9.9
41gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F... 40 9.9
42gb|AY088050.1| Arabidopsis thaliana clone 40701 mRNA, complete s... 40 9.9
43emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 i... 40 9.9
44emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chr... 40 9.9 
>ref|XM_472545.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score =  351 bits (177), Expect = 2e-93
 Identities = 420/501 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 186
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 873 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 814

                                                                       
Query: 187 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 246
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 813 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 754

                                                                       
Query: 247 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaattctgtggattc 306
            ||||||||||| || | |||||| || ||||| ||||| |||||||| |     |||||
Sbjct: 753 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaactgatgagattc 694

                                                                       
Query: 307 ttcacgcgcgatagcctcatgaaccactggatcaaatggcttgccaacagtttccacaac 366
            || || |||||||||||||||| |   |||||||||||||||||||| |||||||||||
Sbjct: 693 ctcgcgtgcgatagcctcatgaatcgaaggatcaaatggcttgccaactgtttccacaac 634

                                                                       
Query: 367 ccctacacctaagcttttcagtgtttctactaattgcttgtatatgccttgatagcttgt 426
            ||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct: 633 tcctacacctaagcttctcaatgtctctactaactgcttgtatatgccttgatagcttgt 574

                                                                       
Query: 427 gctaatcttctgctctttctcagtctctagtgtgacctctacatttgttttctcgaagct 486
           ||||||| |||||||||| ||||||||  | |||| ||||  |||    ||||| || ||
Sbjct: 573 gctaatcgtctgctctttatcagtctccggggtgatctcttgattcaccttctcaaaact 514

                                                                       
Query: 487 atcaaccagaggtaacagactctgtacaagttccacttgtatattcgatgtaaactttgc 546
           |||||||||||  || |||||||| ||||  ||||| |||||||| || |||||| | ||
Sbjct: 513 atcaaccagagtcaatagactctgaacaacatccacctgtatatttgaggtaaacctagc 454

                                                                       
Query: 547 acggtccttttcagtctgcttccggaaattctctagatcagcatttaagcgaagaaactt 606
           ||| ||||||||||||||||||||||||||||| |||||||||||||  || || |||||
Sbjct: 453 acgctccttttcagtctgcttccggaaattctccagatcagcatttatacggaggaactt 394

                                
Query: 607 attcttccctgaagttatttc 627
            | |||||||||||| |||||
Sbjct: 393 gtccttccctgaagtaatttc 373
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>dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N12, full
           insert sequence
          Length = 1180

 Score =  351 bits (177), Expect = 2e-93
 Identities = 420/501 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 186
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 971 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 912

                                                                       
Query: 187 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 246
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 911 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 852

                                                                       
Query: 247 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaattctgtggattc 306
            ||||||||||| || | |||||| || ||||| ||||| |||||||| |     |||||
Sbjct: 851 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaactgatgagattc 792

                                                                       
Query: 307 ttcacgcgcgatagcctcatgaaccactggatcaaatggcttgccaacagtttccacaac 366
            || || |||||||||||||||| |   |||||||||||||||||||| |||||||||||
Sbjct: 791 ctcgcgtgcgatagcctcatgaatcgaaggatcaaatggcttgccaactgtttccacaac 732

                                                                       
Query: 367 ccctacacctaagcttttcagtgtttctactaattgcttgtatatgccttgatagcttgt 426
            ||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct: 731 tcctacacctaagcttctcaatgtctctactaactgcttgtatatgccttgatagcttgt 672

                                                                       
Query: 427 gctaatcttctgctctttctcagtctctagtgtgacctctacatttgttttctcgaagct 486
           ||||||| |||||||||| ||||||||  | |||| ||||  |||    ||||| || ||
Sbjct: 671 gctaatcgtctgctctttatcagtctccggggtgatctcttgattcaccttctcaaaact 612

                                                                       
Query: 487 atcaaccagaggtaacagactctgtacaagttccacttgtatattcgatgtaaactttgc 546
           |||||||||||  || |||||||| ||||  ||||| |||||||| || |||||| | ||
Sbjct: 611 atcaaccagagtcaatagactctgaacaacatccacctgtatatttgaggtaaacctagc 552

                                                                       
Query: 547 acggtccttttcagtctgcttccggaaattctctagatcagcatttaagcgaagaaactt 606
           ||| ||||||||||||||||||||||||||||| |||||||||||||  || || |||||
Sbjct: 551 acgctccttttcagtctgcttccggaaattctccagatcagcatttatacggaggaactt 492

                                
Query: 607 attcttccctgaagttatttc 627
            | |||||||||||| |||||
Sbjct: 491 gtccttccctgaagtaatttc 471



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 75   gagctcccaaacaatggtgctctagcta 102
            ||||||||||| ||||||||||||||||
Sbjct: 1062 gagctcccaaagaatggtgctctagcta 1035
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Plus

                                                                         
Query: 335   ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 394
             |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||| |||
Sbjct: 36084 ggatcaaatggcttgccaactgtttccacaactcctacacctaagcttctcaatgtctct 36143

                                                                         
Query: 395   actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 454
             ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| 
Sbjct: 36144 actaactgcttgtatatgccttgatagcttgtgctaatcgtctgctctttatcagtctcc 36203

                                                                         
Query: 455   agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 514
              | |||| ||||  |||    ||||| || |||||||||||||  || |||||||| |||
Sbjct: 36204 ggggtgatctcttgattcaccttctcaaaactatcaaccagagtcaatagactctgaaca 36263

                                                                         
Query: 515   agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 574
             |  ||||| |||||||| || |||||| | ||||| ||||||||||||||||||||||||
Sbjct: 36264 acatccacctgtatatttgaggtaaacctagcacgctccttttcagtctgcttccggaaa 36323

                                                                  
Query: 575   ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 627
             ||||| |||||||||||||  || || ||||| | |||||||||||| |||||
Sbjct: 36324 ttctccagatcagcatttatacggaggaacttgtccttccctgaagtaatttc 36376



 Score =  111 bits (56), Expect = 3e-21
 Identities = 140/168 (83%)
 Strand = Plus / Plus

                                                                         
Query: 127   tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 186
             ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 35644 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 35703

                                                                         
Query: 187   gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 246
              |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 35704 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 35763

                                                             
Query: 247   cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaa 294
              ||||||||||| || | |||||| || ||||| ||||| ||||||||
Sbjct: 35764 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaa 35811



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 75    gagctcccaaacaatggtgctctagcta 102
             ||||||||||| ||||||||||||||||
Sbjct: 35553 gagctcccaaagaatggtgctctagcta 35580
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Plus

                                                                            
Query: 335      ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 394
                |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||| |||
Sbjct: 21386334 ggatcaaatggcttgccaactgtttccacaactcctacacctaagcttctcaatgtctct 21386393

                                                                            
Query: 395      actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 454
                ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| 
Sbjct: 21386394 actaactgcttgtatatgccttgatagcttgtgctaatcgtctgctctttatcagtctcc 21386453

                                                                            
Query: 455      agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 514
                 | |||| ||||  |||    ||||| || |||||||||||||  || |||||||| |||
Sbjct: 21386454 ggggtgatctcttgattcaccttctcaaaactatcaaccagagtcaatagactctgaaca 21386513

                                                                            
Query: 515      agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 574
                |  ||||| |||||||| || |||||| | ||||| ||||||||||||||||||||||||
Sbjct: 21386514 acatccacctgtatatttgaggtaaacctagcacgctccttttcagtctgcttccggaaa 21386573

                                                                     
Query: 575      ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 627
                ||||| |||||||||||||  || || ||||| | |||||||||||| |||||
Sbjct: 21386574 ttctccagatcagcatttatacggaggaacttgtccttccctgaagtaatttc 21386626



 Score =  111 bits (56), Expect = 3e-21
 Identities = 140/168 (83%)
 Strand = Plus / Plus

                                                                            
Query: 127      tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 186
                ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 21385894 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 21385953

                                                                            
Query: 187      gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 246
                 |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 21385954 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 21386013

                                                                
Query: 247      cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaa 294
                 ||||||||||| || | |||||| || ||||| ||||| ||||||||
Sbjct: 21386014 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaa 21386061



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 75       gagctcccaaacaatggtgctctagcta 102
                ||||||||||| ||||||||||||||||
Sbjct: 21385803 gagctcccaaagaatggtgctctagcta 21385830
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>gb|AY110636.1| Zea mays CL4177_1 mRNA sequence
          Length = 1088

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Minus

                                                                       
Query: 335 ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 394
           |||||||||||||||||||| ||||||||| |  | ||||| ||   | | |||||||| 
Sbjct: 683 ggatcaaatggcttgccaactgtttccacagcttccacacccaaatatcttagtgtttca 624

                                                                       
Query: 395 actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 454
           ||||| ||||||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 623 actaactgcttgtatatgccttgatagcttgcgctgatcttttgctccttctcagtctct 564

                                                                       
Query: 455 agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 514
            | |||  ||||| |||| ||||||| || |||||||| ||||||||||||||||| |||
Sbjct: 563 ggggtgttctctagatttattttctcaaaactatcaactagaggtaacagactctgaaca 504

                                                                       
Query: 515 agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 574
           | ||||||  ||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 503 acttccacccgtatatttgatgttaactttgcacggtccttttcagtctgtttccggaaa 444

                                                                
Query: 575 ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 627
           ||||| || || ||||||||||||| |||||| | |||||| |||||||||||
Sbjct: 443 ttctccaggtcggcatttaagcgaataaacttttccttcccagaagttatttc 391



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 209 gagaccttcactgcggcaggccttagcaccctctccctcagaaggaaccctcggtggact 268
           ||||||||||| |  ||||||||||||| ||||||| ||| | ||||||||| | |||||
Sbjct: 809 gagaccttcacagtagcaggccttagcagcctctccttcaaatggaaccctctgcggact 750

            
Query: 269 t 269
           |
Sbjct: 749 t 749
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>dbj|AK105181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G08, full
           insert sequence
          Length = 375

 Score =  107 bits (54), Expect = 5e-20
 Identities = 138/166 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 186
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 166 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 107

                                                                       
Query: 187 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 246
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 106 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 47

                                                         
Query: 247 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttg 292
            ||||||||||| || | |||||| || ||||| ||||| ||||||
Sbjct: 46  tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttg 1



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 75  gagctcccaaacaatggtgctctagcta 102
           ||||||||||| ||||||||||||||||
Sbjct: 257 gagctcccaaagaatggtgctctagcta 230
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>ref|XM_466685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 999

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 317 atagcctcatgaaccactggatcaaatggcttgccaacagtttccaca 364
           ||||||||||||| ||  ||||||||||| ||||||||||| ||||||
Sbjct: 770 atagcctcatgaagcataggatcaaatggtttgccaacagtctccaca 723
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>gb|AC146272.3| Pan troglodytes BAC clone RP43-29H6 from 7, complete sequence
          Length = 149408

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 70    aaacagagctcccaaacaatgg 91
             ||||||||||||||||||||||
Sbjct: 70767 aaacagagctcccaaacaatgg 70746
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>gb|AC142352.1| Pan troglodytes BAC clone RP43-21K18 from 7, complete sequence
          Length = 171165

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 70    aaacagagctcccaaacaatgg 91
             ||||||||||||||||||||||
Sbjct: 93183 aaacagagctcccaaacaatgg 93162
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>gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, complete sequence
          Length = 159620

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 70    aaacagagctcccaaacaatgg 91
             ||||||||||||||||||||||
Sbjct: 77391 aaacagagctcccaaacaatgg 77370
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 335      ggatcaaatggcttgccaacagtttccaca 364
                ||||||||||| ||||||||||| ||||||
Sbjct: 24112846 ggatcaaatggtttgccaacagtctccaca 24112817
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 335   ggatcaaatggcttgccaacagtttccaca 364
             ||||||||||| ||||||||||| ||||||
Sbjct: 71587 ggatcaaatggtttgccaacagtctccaca 71558
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>gb|AY105803.1| Zea mays PCO143734 mRNA sequence
          Length = 1421

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 335 ggatcaaatggcttgccaacagtttc 360
           ||||||||||| ||||||||||||||
Sbjct: 858 ggatcaaatggtttgccaacagtttc 833
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>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 378    agcttttcagtgtttctacta 398
              |||||||||||||||||||||
Sbjct: 101661 agcttttcagtgtttctacta 101641
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>emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chromosome 13 Contains the
              3' end of the DIAPH3 gene for diaphanous homolog 3
              (Drosophila), complete sequence
          Length = 154212

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 605    ttattcttccctgaagttatt 625
              |||||||||||||||||||||
Sbjct: 114457 ttattcttccctgaagttatt 114477
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>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence
          Length = 161257

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 347    ttgccaacagtttccacaacccct 370
              ||||||||||| ||||||||||||
Sbjct: 143021 ttgccaacagtctccacaacccct 142998
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>gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, complete sequence
          Length = 176008

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 347   ttgccaacagtttccacaacccct 370
             ||||||||||| ||||||||||||
Sbjct: 29381 ttgccaacagtctccacaacccct 29358
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>ref|NM_103325.1| Arabidopsis thaliana adenyl-nucleotide exchange factor/ chaperone
           binding / protein homodimerization AT1G36390 transcript
           variant AT1G36390.1 mRNA, complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 700 ggatcaaaaggcttgccaacagtt 677
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>ref|NM_179420.1| Arabidopsis thaliana adenyl-nucleotide exchange factor/ chaperone
           binding / protein homodimerization AT1G36390 transcript
           variant AT1G36390.2 mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 699 ggatcaaaaggcttgccaacagtt 676
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>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete
             sequence
          Length = 212576

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   cacaacccctacacctaagc 380
             ||||||||||||||||||||
Sbjct: 62559 cacaacccctacacctaagc 62578
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>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence
          Length = 210979

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 653   gctgctttacttctctcttc 672
             ||||||||||||||||||||
Sbjct: 83005 gctgctttacttctctcttc 83024
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>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence
          Length = 255921

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aaagggacccatttaaaatc 41
              ||||||||||||||||||||
Sbjct: 116560 aaagggacccatttaaaatc 116541
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>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence
          Length = 185938

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   tgaaccactggatcaaatgg 345
             ||||||||||||||||||||
Sbjct: 91829 tgaaccactggatcaaatgg 91848
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>emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in linkage group 23,
              complete sequence
          Length = 259092

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     atattaacagtacaaacaga 76
              ||||||||||||||||||||
Sbjct: 159589 atattaacagtacaaacaga 159608
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>emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete
             sequence
          Length = 126263

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   agcaccctctccctcagaaggaac 256
             ||||||||||| ||||||||||||
Sbjct: 32436 agcaccctctctctcagaaggaac 32459
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>emb|Z82189.1|HS170A21 Human DNA sequence from clone RP1-170A21 on chromosome 22, complete
             sequence
          Length = 176947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cctccacaggctcctccgaa 172
             ||||||||||||||||||||
Sbjct: 11528 cctccacaggctcctccgaa 11547
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>emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chromosome X Contains part
             of the SH3KBP1 gene for SH3-domain kinase binding protein
             1 (CIN85), complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 606   tattcttccctgaagttatttcag 629
             |||||| |||||||||||||||||
Sbjct: 44308 tattctcccctgaagttatttcag 44285
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>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete
              sequence
          Length = 252632

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    tactaattgcttgtatatgc 413
              ||||||||||||||||||||
Sbjct: 141316 tactaattgcttgtatatgc 141335
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>emb|AL133341.12| Human DNA sequence from clone RP3-342O24 on chromosome 20 Contains ESTs
             and GSSs, complete sequence
          Length = 35033

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    tgttgtttaaaagggacccattta 36
             |||||||||||||| |||||||||
Sbjct: 28927 tgttgtttaaaaggcacccattta 28904
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>gb|AY270320.1| Homo sapiens clone SKT02-D7 putative promoter sequence
          Length = 295

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 tgttgtttaaaagggacccattta 36
          |||||||||||||| |||||||||
Sbjct: 65 tgttgtttaaaaggcacccattta 88
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>gb|AY117176.1| Arabidopsis thaliana putative heat shock protein (At1g36390) mRNA,
           complete cds
          Length = 871

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 653 ggatcaaaaggcttgccaacagtt 630
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>gb|AY065397.1| Arabidopsis thaliana putative heat shock protein (At1g36390) mRNA,
           complete cds
          Length = 1024

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 702 ggatcaaaaggcttgccaacagtt 679
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>gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complete sequence
          Length = 195917

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   agcaccctctccctcagaag 252
             ||||||||||||||||||||
Sbjct: 85400 agcaccctctccctcagaag 85381
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>gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 53631

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 604   cttattcttccctgaagttatttc 627
             |||||| |||||||||||||||||
Sbjct: 27400 cttatttttccctgaagttatttc 27377
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>emb|BX571977.7| Zebrafish DNA sequence from clone DKEY-9E15, complete sequence
          Length = 82992

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    atattaacagtacaaacaga 76
             ||||||||||||||||||||
Sbjct: 77652 atattaacagtacaaacaga 77671
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>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168186

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 666   tctcttcctccatgctagtgattg 689
             ||||||||||| ||||||||||||
Sbjct: 42335 tctcttcctccttgctagtgattg 42358
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>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181191

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tgtgttgtttaaaagggacc 30
              ||||||||||||||||||||
Sbjct: 142525 tgtgttgtttaaaagggacc 142506
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>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence
          Length = 202543

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 423    ttgtgctaatcttctgctctttctcagtctct 454
              |||| |||||||||||||| |||||| |||||
Sbjct: 189293 ttgttctaatcttctgctccttctcattctct 189324
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>emb|BX814493.1|CNS0AAR9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZA09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 988

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 685 ggatcaaaaggcttgccaacagtt 662
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>gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete sequence
          Length = 147327

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 446   tcagtctctagtgtgacctctacatttgtttt 477
             |||||||||| ||  |||||||||||||||||
Sbjct: 73739 tcagtctctaatgaaacctctacatttgtttt 73708
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>gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F23 genomic sequence, complete
             sequence
          Length = 73252

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 335   ggatcaaatggcttgccaacagtt 358
             |||||||| |||||||||||||||
Sbjct: 53874 ggatcaaaaggcttgccaacagtt 53897
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>gb|AY088050.1| Arabidopsis thaliana clone 40701 mRNA, complete sequence
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 335 ggatcaaatggcttgccaacagtt 358
           |||||||| |||||||||||||||
Sbjct: 700 ggatcaaaaggcttgccaacagtt 677
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>emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 in linkage group 18,
              complete sequence
          Length = 222376

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 413    ccttgatagcttgtgctaatcttc 436
              |||||| |||||||||||||||||
Sbjct: 157635 ccttgaaagcttgtgctaatcttc 157658
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>emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chromosome 2, complete
             sequence
          Length = 103901

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 502   cagactctgtacaagttccacttg 525
             |||||||| |||||||||||||||
Sbjct: 48983 cagactctttacaagttccacttg 49006


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,327,104
Number of Sequences: 3902068
Number of extensions: 6327104
Number of successful extensions: 121981
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121825
Number of HSP's gapped (non-prelim): 151
length of query: 722
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 699
effective length of database: 17,143,297,704
effective search space: 11983165095096
effective search space used: 11983165095096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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