>HEM3_ACIAD (Q6FFA9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 311

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +1

Query: 88  PLLGAGALELPCRNSSRYLLDLHARLANLPVS 183
           P +G GAL L CR + + +LDL A LA+ P S
Sbjct: 197 PAVGQGALGLECRANDKKILDLIAPLAHQPTS 228

>HEM3_STAES (Q8CNY8) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 308

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 88  PLLGAGALELPCRNSSRYLLDLHARLANLPVS 183
           P +G GAL + CR+  + LLDL +++ N  V+
Sbjct: 193 PAIGQGALGIECRSDDKELLDLLSKVHNHDVA 224

>HEM3_STAEQ (Q5HNN3) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 308

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 88  PLLGAGALELPCRNSSRYLLDLHARLANLPVS 183
           P +G GAL + CR+  + LLDL +++ N  V+
Sbjct: 193 PAIGQGALGIECRSDDKELLDLLSKVHNHDVA 224

>SWS_DROME (Q9U969) Protein Swiss cheese|
          Length = 1425

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 159 TSR*LAS*PPLCV*ATPEMNPSCTTNGIQ*GGSVNPLMPSADRSNHLREKKQVMHPYPTK 338
           +SR   + PP+ +     M  + +  G   G SV    P +  S H RE+  +  P P  
Sbjct: 344 SSRQAPNGPPMVISQMNLMQSAVSGTGSS-GVSVTVTRPPSSPSRHSREEHTLSDPNPNP 402

Query: 339 D*KLHHKISIFT 374
           D   H   ++FT
Sbjct: 403 DGSFHGTTNLFT 414

>PPS3_BACSU (P39847) Peptide synthetase 3|
          Length = 2555

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 92   CLVLEPWNFHVETQVVTFWTCMHVSLTCQLA-PIMR 196
            C  +  WN +  T+  TF TC+H+  T +L+ PI R
Sbjct: 1782 CPEVSIWNGYGPTENTTFSTCLHIQKTYELSIPIGR 1817


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,177,760
Number of Sequences: 219361
Number of extensions: 1219096
Number of successful extensions: 3030
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)