ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X82937.1|HVRNAJIP H.vulgare mRNA for jasmonate induced protein 357 3e-95
2dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone... 50 0.010
3gb|AC008200.5| Drosophila melanogaster clone BACR17P04, complete... 46 0.16
4gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete... 46 0.16
5emb|Z11840.1|DMHDGHOGD D.melanogaster hedgehog gene DNA 46 0.16
6gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80... 46 0.16
7gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, com... 44 0.63
8gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, com... 44 0.63
9emb|CR676820.2|CNS0FL74 Tetraodon nigroviridis full-length cDNA 44 0.63
10emb|CR660102.2|CNS0F8B0 Tetraodon nigroviridis full-length cDNA 44 0.63
11emb|AL121999.18|HSJ543J13 Human DNA sequence from clone RP4-543J... 44 0.63
12emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on ch... 44 0.63
13gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, comple... 44 0.63
14emb|AL928617.13| Mouse DNA sequence from clone RP23-326E21 on ch... 44 0.63
15ref|XM_639870.1| Dictyostelium discoideum hypothetical protein (... 42 2.5
16gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H2... 42 2.5
17gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 42 2.5
18gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, com... 42 2.5
19gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, co... 42 2.5
20gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosom... 42 2.5
21emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.5
22emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on ch... 42 2.5
23gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosom... 42 2.5
24gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Canc... 42 2.5
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
26gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047... 42 2.5
27gb|AC109912.10| Homo sapiens 3 BAC RP11-640G21 (Roswell Park Can... 42 2.5
28gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone ... 42 2.5
29dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
30dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
31emb|Y15435.1|KLPDC1GP Kluyveromyces lactis PDC1 gene, promoter r... 42 2.5
32emb|AL049830.3|CNS00009 Human chromosome 14 DNA sequence BAC R-8... 42 2.5
33emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromo... 42 2.5
34emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chro... 42 2.5
35emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 2.5
36gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, com... 40 9.8
37gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Can... 40 9.8
38gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, com... 40 9.8
39ref|XM_479497.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.8
40ref|XM_513270.1| PREDICTED: Pan troglodytes similar to alpha 1 t... 40 9.8
41gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, com... 40 9.8
42gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, co... 40 9.8
43gb|AC011252.5| Drosophila melanogaster clone BACR23H21, complete... 40 9.8
44gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete... 40 9.8
45gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 40 9.8
46ref|XM_658862.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.8
47ref|XM_802377.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.8
48gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosom... 40 9.8
49gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome... 40 9.8
50gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome... 40 9.8
51emb|Z81581.1|CET02E1 Caenorhabditis elegans Cosmid T02E1, comple... 40 9.8
52ref|XM_816038.1| Trypanosoma cruzi strain CL Brener cation trans... 40 9.8
53gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosom... 40 9.8
54gb|AC133000.5| Rattus Norvegicus Strain CH230-62B6 BAC, BN/SsNHs... 40 9.8
55emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chr... 40 9.8
56emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chr... 40 9.8
57emb|AL354694.18| Human DNA sequence from clone RP11-77E14 on chr... 40 9.8
58emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chro... 40 9.8
59emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 o... 40 9.8
60ref|XM_964819.1| PREDICTED: Tribolium castaneum similar to CG847... 40 9.8
61emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4... 40 9.8
62emb|AL773517.4| Mouse DNA sequence from clone RP24-170J19 on chr... 40 9.8
63gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, co... 40 9.8
64gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosom... 40 9.8
65gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswel... 40 9.8
66gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell... 40 9.8
67gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 40 9.8
68gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete seq... 40 9.8
69ref|NM_164834.1| Drosophila melanogaster Hepatocyte nuclear fact... 40 9.8
70ref|NM_164833.1| Drosophila melanogaster Hepatocyte nuclear fact... 40 9.8
71ref|NM_057539.3| Drosophila melanogaster Hepatocyte nuclear fact... 40 9.8
72gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor ... 40 9.8
73gb|AC104082.3| Homo sapiens BAC clone RP11-570L13 from 4, comple... 40 9.8
74gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, co... 40 9.8
75gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, compl... 40 9.8
76gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, comp... 40 9.8
77gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome... 40 9.8
78ref|NM_001026692.2| Caenorhabditis elegans human KRIT 1 (Krev in... 40 9.8
79gb|AF307969.1|AF307969 Aptostichus simus clone SC 16S ribosomal ... 40 9.8
80gb|AF307964.1|AF307964 Aptostichus simus clone LC 16S ribosomal ... 40 9.8
81gb|AF307963.1|AF307963 Aptostichus simus clone PES 16S ribosomal... 40 9.8
82gb|AF307962.1|AF307962 Aptostichus simus clone VEN 16S ribosomal... 40 9.8
83gb|AF307961.1|AF307961 Aptostichus simus clone COP 16S ribosomal... 40 9.8
84dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
85dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
86gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Can... 40 9.8
87gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, r... 40 9.8
88gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chrom... 40 9.8
89gb|AC007278.4| Homo sapiens BAC clone RP11-308G20 from 2, comple... 40 9.8
90gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complet... 40 9.8
91gb|BT003533.1| Drosophila melanogaster RE09535 full insert cDNA 40 9.8
92gb|AC055811.20| Homo sapiens chromosome 17, clone RP11-45M22, co... 40 9.8
93gb|AC122716.2| Homo sapiens chromosome 5 clone RP11-567A12, comp... 40 9.8
94dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
95dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
96dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
97gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete s... 40 9.8
98dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
99gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31... 40 9.8
100gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 9.8
101gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61... 40 9.8
102gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, com... 40 9.8
103gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 ... 40 9.8
104gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone ... 40 9.8
105gb|AC153864.5| Mus musculus 10 BAC RP23-345N8 (Roswell Park Canc... 40 9.8
106emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 9.8
107gb|BT001800.1| Drosophila melanogaster RH29074 full insert cDNA 40 9.8
108gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, co... 40 9.8
109gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, compl... 40 9.8
110gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, comple... 40 9.8
111gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome... 40 9.8
112emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chr... 40 9.8
113gb|U70874.1|DMU70874 Drosophila melanogaster hepatocyte nuclear ... 40 9.8
114gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 9.8
115gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosom... 40 9.8
116emb|AJ009613.4|HSAJ9613 Homo sapiens chromosome 17 sequence from... 40 9.8
117emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chro... 40 9.8
118gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome... 40 9.8
119dbj|AB055144.1| Halocynthia roretzi Hremx mRNA for transcription... 40 9.8 
>emb|X82937.1|HVRNAJIP H.vulgare mRNA for jasmonate induced protein
          Length = 1334

 Score =  357 bits (180), Expect = 3e-95
 Identities = 369/432 (85%)
 Strand = Plus / Minus

                                                                       
Query: 285 cgacttttcccaaatcttcaaatgagtaagtcaccatggggtttccatgtccacttcccg 344
           |||||||||||||| |||||||||||||||||||||  |  ||||| |||||   | |||
Sbjct: 753 cgacttttcccaaagcttcaaatgagtaagtcaccacagattttccttgtcccgcttccg 694

                                                                       
Query: 345 caataatattgtcatatgcctttaacttttgagtatcatccaaggttttaaaagcccccc 404
           ||||||||||||||||| ||| || ||||||  ||||||||||| |||| ||||||||||
Sbjct: 693 caataatattgtcatatacctgtagcttttggatatcatccaagtttttgaaagcccccc 634

                                                                       
Query: 405 tcaaaccaggcttggcggtatcatctgccaccagatcctgaaacttgattttgttaccct 464
           | |||||| |||| |   |||  |||  ||| ||||||| |||| ||||||||||  |||
Sbjct: 633 taaaaccaagctttgacatattttcttgcacaagatcctcaaacatgattttgttttcct 574

                                                                       
Query: 465 tgagccattctgagaattgatttggtataaaatgttcaaacttttcggcatcctcaagcg 524
           ||||||||| ||||||||||||||||  ||| |||| |||||||| ||||| ||| ||||
Sbjct: 573 tgagccattttgagaattgatttggtgcaaagtgttgaaactttttggcattctccagcg 514

                                                                       
Query: 525 cagctttcttatacctgccagcctcaagagcaaggcattgagcttccttctgttgagttg 584
             |||||||||||| ||||||||||||| |||||||  || || ||||||||||| || |
Sbjct: 513 tggctttcttatacatgccagcctcaagggcaaggcgctgggcctccttctgttgggtgg 454

                                                                       
Query: 585 ccggatcaagacactttagctgcttgatgagatcatcactgtgggtcttgaccttatcaa 644
           |  |||  ||  ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 453 ctagattgaggaactttagctgcttgatgagatcatcactgtgggtcttgagcttgtcaa 394

                                                                       
Query: 645 ggtaggtgagacgggtgttgtaactacggatgaatttgagggatgttccgatggccttgg 704
           ||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||||||
Sbjct: 393 ggtaggtgagacgggtgttgtaactccggatgaattggagagatattccgatggccttgg 334

                       
Query: 705 tgcagtactcat 716
           ||||||| ||||
Sbjct: 333 tgcagtagtcat 322



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Minus

                                                                        
Query: 173  gggtagttgtgcgtaacaaggcgagcgagttggagaccatcagtcataggagccacacga 232
            ||||| |||||| |||| || |||||||||| |||||||| || |||||| |||||||| 
Sbjct: 1138 gggtaattgtgcttaactagacgagcgagttcgagaccatgaggcataggcgccacacgg 1079

                                                         
Query: 233  caaccactaagcccgtctgttatattcaccttgctagttccactg 277
            ||| |  |||||||||||||||| |||||||||||||||||||||
Sbjct: 1078 caaactgtaagcccgtctgttatcttcaccttgctagttccactg 1034
to top
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218,
             complete sequence
          Length = 113213

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 91    tgcacaaagtggcagcaacaacaacaaaa 119
             |||||||||||||| ||||||||||||||
Sbjct: 94372 tgcacaaagtggcaacaacaacaacaaaa 94400
to top
>gb|AC008200.5| Drosophila melanogaster clone BACR17P04, complete sequence
          Length = 163686

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 103   cagcaacaacaacaaaagatagcagca 129
             ||||||||||||||||||| |||||||
Sbjct: 99668 cagcaacaacaacaaaagacagcagca 99694
to top
>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence
          Length = 166693

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 103 cagcaacaacaacaaaagatagcagca 129
           ||||||||||||||||||| |||||||
Sbjct: 690 cagcaacaacaacaaaagacagcagca 716
to top
>emb|Z11840.1|DMHDGHOGD D.melanogaster hedgehog gene DNA
          Length = 19116

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 103   cagcaacaacaacaaaagatagcagca 129
             ||||||||||||||||||| |||||||
Sbjct: 13511 cagcaacaacaacaaaagacagcagca 13485
to top
>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the
             complete sequence
          Length = 233746

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 103   cagcaacaacaacaaaagatagcagca 129
             ||||||||||||||||||| |||||||
Sbjct: 17616 cagcaacaacaacaaaagacagcagca 17642
to top
>gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, complete sequence
          Length = 131719

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 102   gcagcaacaacaacaaaagata 123
             ||||||||||||||||||||||
Sbjct: 26936 gcagcaacaacaacaaaagata 26957
to top
>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence
          Length = 169244

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 102   gcagcaacaacaacaaaagata 123
             ||||||||||||||||||||||
Sbjct: 77665 gcagcaacaacaacaaaagata 77644
to top
>emb|CR676820.2|CNS0FL74 Tetraodon nigroviridis full-length cDNA
          Length = 767

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 tggcagcaacaacaacaaaaga 121
           ||||||||||||||||||||||
Sbjct: 376 tggcagcaacaacaacaaaaga 397
to top
>emb|CR660102.2|CNS0F8B0 Tetraodon nigroviridis full-length cDNA
          Length = 721

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 tggcagcaacaacaacaaaaga 121
           ||||||||||||||||||||||
Sbjct: 330 tggcagcaacaacaacaaaaga 351
to top
>emb|AL121999.18|HSJ543J13 Human DNA sequence from clone RP4-543J13 on chromosome 1p13.1-13.3
             Contains a novel gene, complete sequence
          Length = 137490

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 382   atccaaggttttaaaagcccccctca 407
             |||||||| |||||||||||||||||
Sbjct: 80442 atccaaggctttaaaagcccccctca 80417
to top
>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the
              Mylc2a gene for myosin light chain, regulatory A, the Gck
              gene for glucokinase, a novel gene, the gene for prenylated
              SNARE protein (Ykt6), the Camk2d gene for
              calcium/calmodulin-dependent protein kinase II delta and
              two CpG islands, complete sequence
          Length = 172356

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 102    gcagcaacaacaacaaaagata 123
              ||||||||||||||||||||||
Sbjct: 167285 gcagcaacaacaacaaaagata 167306
to top
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence
          Length = 191041

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 103    cagcaacaacaacaaaagatag 124
              ||||||||||||||||||||||
Sbjct: 122008 cagcaacaacaacaaaagatag 121987
to top
>emb|AL928617.13| Mouse DNA sequence from clone RP23-326E21 on chromosome 2, complete
              sequence
          Length = 190652

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 563    tgagcttccttctgttgagttg 584
              ||||||||||||||||||||||
Sbjct: 133371 tgagcttccttctgttgagttg 133392
to top
>ref|XM_639870.1| Dictyostelium discoideum hypothetical protein (DDB0168974), partial
           mRNA
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 102 gcagcaacaacaacaaaagat 122
           |||||||||||||||||||||
Sbjct: 489 gcagcaacaacaacaaaagat 509
to top
>gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H22, complete sequence
          Length = 148464

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 99    gtggcagcaacaacaacaaaa 119
             |||||||||||||||||||||
Sbjct: 37754 gtggcagcaacaacaacaaaa 37774
to top
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 99      gtggcagcaacaacaacaaaa 119
               |||||||||||||||||||||
Sbjct: 1247977 gtggcagcaacaacaacaaaa 1247997
to top
>gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, complete sequence
          Length = 177147

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   caacaacaacaaaagatagca 126
             |||||||||||||||||||||
Sbjct: 72653 caacaacaacaaaagatagca 72673
to top
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence
          Length = 204108

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 565    agcttccttctgttgagttgc 585
              |||||||||||||||||||||
Sbjct: 195826 agcttccttctgttgagttgc 195846
to top
>gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosome 6, complete sequence
          Length = 195925

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 484   atttggtataaaatgttcaaa 504
             |||||||||||||||||||||
Sbjct: 29219 atttggtataaaatgttcaaa 29199
to top
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 17      aagtatataattaagattatg 37
               |||||||||||||||||||||
Sbjct: 1459694 aagtatataattaagattatg 1459714
to top
>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 159399

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   caacaacaacaaaagatagca 126
             |||||||||||||||||||||
Sbjct: 16030 caacaacaacaaaagatagca 16050
to top
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete
            sequence
          Length = 202301

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 565  agcttccttctgttgagttgc 585
            |||||||||||||||||||||
Sbjct: 1374 agcttccttctgttgagttgc 1394
to top
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 188768

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   caacaacaacaaaagatagca 126
             |||||||||||||||||||||
Sbjct: 95712 caacaacaacaaaagatagca 95732
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 102      gcagcaacaacaacaaaagat 122
                |||||||||||||||||||||
Sbjct: 15606430 gcagcaacaacaacaaaagat 15606450
to top
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4,
             complete sequence
          Length = 254733

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   gcagcaacaacaacaaaagat 122
             |||||||||||||||||||||
Sbjct: 80109 gcagcaacaacaacaaaagat 80089
to top
>gb|AC109912.10| Homo sapiens 3 BAC RP11-640G21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86114

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   cagcaacaacaacaaaagata 123
             |||||||||||||||||||||
Sbjct: 13721 cagcaacaacaacaaaagata 13741
to top
>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete
              sequence
          Length = 249205

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 539    ctgccagcctcaagagcaagg 559
              |||||||||||||||||||||
Sbjct: 205389 ctgccagcctcaagagcaagg 205409
to top
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0644G05
          Length = 143119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    gcagcaacaacaacaaaagat 122
              |||||||||||||||||||||
Sbjct: 133990 gcagcaacaacaacaaaagat 134010
to top
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0035A24
          Length = 176446

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   gcagcaacaacaacaaaagat 122
             |||||||||||||||||||||
Sbjct: 15117 gcagcaacaacaacaaaagat 15137
to top
>emb|Y15435.1|KLPDC1GP Kluyveromyces lactis PDC1 gene, promoter region
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 17   aagtatataattaagattatg 37
            |||||||||||||||||||||
Sbjct: 1074 aagtatataattaagattatg 1054
to top
>emb|AL049830.3|CNS00009 Human chromosome 14 DNA sequence BAC R-829H16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214558

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     gtggcagcaacaacaacaaaa 119
              |||||||||||||||||||||
Sbjct: 171411 gtggcagcaacaacaacaaaa 171431
to top
>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence
          Length = 241053

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 590    tcaagacactttagctgcttg 610
              |||||||||||||||||||||
Sbjct: 232266 tcaagacactttagctgcttg 232246
to top
>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete
             sequence
          Length = 178361

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   atagcagcagtagtagagtag 141
             |||||||||||||||||||||
Sbjct: 18566 atagcagcagtagtagagtag 18586
to top
>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
             sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 590   tcaagacactttagctgcttg 610
             |||||||||||||||||||||
Sbjct: 14591 tcaagacactttagctgcttg 14571
to top
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence
          Length = 168366

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 90021 cagcaacaacaacaaaagat 90040
to top
>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211343

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     aaagtggcagcaacaacaacaaaa 119
              ||||||||| ||||||||||||||
Sbjct: 145193 aaagtggcaacaacaacaacaaaa 145216
to top
>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence
          Length = 181980

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 115763 agtggcagcaacaacaacaa 115744
to top
>ref|XM_479497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 ggcgagcgagttggagacca 211
           ||||||||||||||||||||
Sbjct: 731 ggcgagcgagttggagacca 712
to top
>ref|XM_513270.1| PREDICTED: Pan troglodytes similar to alpha 1 type XVI collagen
            precursor; collagen XVI, alpha-1 polypeptide (LOC456702),
            mRNA
          Length = 4389

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  cccccctcaaaccaggcttg 418
            ||||||||||||||||||||
Sbjct: 3163 cccccctcaaaccaggcttg 3144
to top
>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 167157 agtggcagcaacaacaacaa 167176
to top
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence
          Length = 144770

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   caacaacaacaaaagatagc 125
             ||||||||||||||||||||
Sbjct: 51340 caacaacaacaaaagatagc 51321
to top
>gb|AC011252.5| Drosophila melanogaster clone BACR23H21, complete sequence
          Length = 157965

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 88    gagtgcacaaagtggcagcaacaacaacaaaa 119
             |||||||| ||| ||||| |||||||||||||
Sbjct: 96047 gagtgcacgaagcggcaggaacaacaacaaaa 96078
to top
>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence
          Length = 179374

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 88    gagtgcacaaagtggcagcaacaacaacaaaa 119
             |||||||| ||| ||||| |||||||||||||
Sbjct: 23079 gagtgcacgaagcggcaggaacaacaacaaaa 23110
to top
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227955

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   caacaacaacaaaagatagc 125
             ||||||||||||||||||||
Sbjct: 18884 caacaacaacaaaagatagc 18903
to top
>ref|XM_658862.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6350.2), mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 763 agtggcagcaacaacaacaa 782
to top
>ref|XM_802377.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511559.50) partial mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  tggcagcaacaacaacaaaa 119
            ||||||||||||||||||||
Sbjct: 1059 tggcagcaacaacaacaaaa 1078
to top
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence
          Length = 196150

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   caacaacaacaaaagatagcagca 129
             ||||||||| ||||||||||||||
Sbjct: 41406 caacaacaaaaaaagatagcagca 41429
to top
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete
            sequence
          Length = 158058

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  caacaacaacaaaagatagcagca 129
            ||||||||| ||||||||||||||
Sbjct: 4411 caacaacaaaaaaagatagcagca 4388
to top
>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence
          Length = 138128

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gcagcaacaacaacaaaaga 121
             ||||||||||||||||||||
Sbjct: 82700 gcagcaacaacaacaaaaga 82681
to top
>emb|Z81581.1|CET02E1 Caenorhabditis elegans Cosmid T02E1, complete sequence
          Length = 33520

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   ataaaatgttcaaacttttc 510
             ||||||||||||||||||||
Sbjct: 22873 ataaaatgttcaaacttttc 22854
to top
>ref|XM_816038.1| Trypanosoma cruzi strain CL Brener cation transporter protein
           (Tc00.1047053508355.420) partial mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 103 cagcaacaacaacaaaagatagca 126
           ||||| ||||||||||||||||||
Sbjct: 25  cagcagcaacaacaaaagatagca 2
to top
>gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosome 14, complete sequence
          Length = 198165

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 176309 agtggcagcaacaacaacaa 176328
to top
>gb|AC133000.5| Rattus Norvegicus Strain CH230-62B6 BAC, BN/SsNHsd/MCW, complete sequence
          Length = 245581

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 150301 agtggcagcaacaacaacaa 150320
to top
>emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chromosome 9 Contains a
              pseudogene similar to part of SET translocation (myeloid
              leukemia-associated) (SET), the 5' end of the gene for
              euchromatic histone methyltransferase 1 (FLJ12879,
              KIAA1876) (Eu-HMTase1) and two CpG islands, complete
              sequence
          Length = 166141

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gcagcaacaacaacaaaaga 121
              ||||||||||||||||||||
Sbjct: 139760 gcagcaacaacaacaaaaga 139779
to top
>emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chromosome 9q21.11-21.2
              Contains the 5' end of the PIP5K1B gene for
              phosphatidylinositol-4-phosphate 5-kinase, type I, beta
              (MSS4, STM7), a novel gene (MGC17374), a adaptor-related
              protein complex 3, mu 2 subunit (P47B, AP47B, CLA20)
              (AP3M2) pseudogene, the 3' end of a novel gene and 2 CpG
              islands, complete sequence
          Length = 154071

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    gagccattctgagaattgat 485
              ||||||||||||||||||||
Sbjct: 124912 gagccattctgagaattgat 124931
to top
>emb|AL354694.18| Human DNA sequence from clone RP11-77E14 on chromosome 9 Contains a novel
              gene, complete sequence
          Length = 153324

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    cccctcaaaccaggcttggc 420
              ||||||||||||||||||||
Sbjct: 113455 cccctcaaaccaggcttggc 113436
to top
>emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chromosome 13, complete
              sequence
          Length = 127641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    cagcaacaacaacaaaagatagca 126
              |||||||||||||||||| |||||
Sbjct: 125371 cagcaacaacaacaaaagctagca 125348
to top
>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3
             Contains part of the COL21A1 gene for collagen, type XXI,
             alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L,
             COL20A1, DKFZp564B052), complete sequence
          Length = 126501

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ttctgggataatcagttcat 166
             ||||||||||||||||||||
Sbjct: 93133 ttctgggataatcagttcat 93152
to top
>ref|XM_964819.1| PREDICTED: Tribolium castaneum similar to CG8475-PA, isoform A
             (LOC658431), mRNA
          Length = 60889

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 35302 cagcaacaacaacaaaagat 35321
to top
>emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4 DNA and alt-1 gene
          Length = 32442

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   taaaatgttcaaacttttcg 511
             ||||||||||||||||||||
Sbjct: 22062 taaaatgttcaaacttttcg 22043
to top
>emb|AL773517.4| Mouse DNA sequence from clone RP24-170J19 on chromosome 4 Contains a
             t-complex protein 1 (Tcp1) pseudogene, complete sequence
          Length = 167940

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   cagcaacaacaacaaaagatagca 126
             ||||||||||||||||| ||||||
Sbjct: 80920 cagcaacaacaacaaaaaatagca 80943
to top
>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence
          Length = 171770

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 672  ggatgaatttgagggatgtt 691
            ||||||||||||||||||||
Sbjct: 5321 ggatgaatttgagggatgtt 5340
to top
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence
          Length = 205094

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 61473 cagcaacaacaacaaaagat 61492
to top
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 166352

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaacaaaagatagcagcag 130
             ||||||||||||||||||||
Sbjct: 27723 acaacaaaagatagcagcag 27742
to top
>gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178394

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 91     tgcacaaagtggcagcaacaacaa 114
              |||||||| |||||||||||||||
Sbjct: 139983 tgcacaaactggcagcaacaacaa 140006
to top
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 91   tgcacaaagtggcagcaacaacaa 114
            |||||||| |||||||||||||||
Sbjct: 5137 tgcacaaactggcagcaacaacaa 5160
to top
>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence
          Length = 112570

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   caacaacaacaaaagatagc 125
             ||||||||||||||||||||
Sbjct: 96363 caacaacaacaaaagatagc 96344
to top
>ref|NM_164834.1| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RC,
           transcript variant C (Hnf4), mRNA
          Length = 2656

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 345 agtggcagcaacaacaacaa 364
to top
>ref|NM_164833.1| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RB,
           transcript variant B (Hnf4), mRNA
          Length = 2715

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 404 agtggcagcaacaacaacaa 423
to top
>ref|NM_057539.3| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RA,
           transcript variant A (Hnf4), mRNA
          Length = 3248

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 937 agtggcagcaacaacaacaa 956
to top
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete
              cds, alternatively spliced
          Length = 381696

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ttctgggataatcagttcat 166
              ||||||||||||||||||||
Sbjct: 184174 ttctgggataatcagttcat 184155
to top
>gb|AC104082.3| Homo sapiens BAC clone RP11-570L13 from 4, complete sequence
          Length = 182770

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    agcaacaacaacaaaagata 123
              ||||||||||||||||||||
Sbjct: 149605 agcaacaacaacaaaagata 149586
to top
>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence
          Length = 187574

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agtggcagcaacaacaacaa 117
             ||||||||||||||||||||
Sbjct: 50343 agtggcagcaacaacaacaa 50362
to top
>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence
          Length = 107764

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   cttctgttgagttgccggat 590
             ||||||||||||||||||||
Sbjct: 16125 cttctgttgagttgccggat 16106
to top
>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence
          Length = 161775

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agtggcagcaacaacaacaa 117
             ||||||||||||||||||||
Sbjct: 65445 agtggcagcaacaacaacaa 65464
to top
>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence
          Length = 183148

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gcagcaacaacaacaaaaga 121
              ||||||||||||||||||||
Sbjct: 121663 gcagcaacaacaacaaaaga 121682
to top
>ref|NM_001026692.2| Caenorhabditis elegans human KRIT 1 (Krev interaction
            trapped/cerebral cavernous malformation 1) homolog family
            member (kri-1) (kri-1) mRNA, complete cds
          Length = 2227

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 491  ataaaatgttcaaacttttc 510
            ||||||||||||||||||||
Sbjct: 2195 ataaaatgttcaaacttttc 2214
to top
>gb|AF307969.1|AF307969 Aptostichus simus clone SC 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  agtatataattaagattatggtat 41
           |||||| |||||||||||||||||
Sbjct: 520 agtataaaattaagattatggtat 543
to top
>gb|AF307964.1|AF307964 Aptostichus simus clone LC 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 741

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  agtatataattaagattatggtat 41
           |||||| |||||||||||||||||
Sbjct: 520 agtataaaattaagattatggtat 543
to top
>gb|AF307963.1|AF307963 Aptostichus simus clone PES 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  agtatataattaagattatggtat 41
           |||||| |||||||||||||||||
Sbjct: 520 agtataaaattaagattatggtat 543
to top
>gb|AF307962.1|AF307962 Aptostichus simus clone VEN 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 743

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  agtatataattaagattatggtat 41
           |||||| |||||||||||||||||
Sbjct: 521 agtataaaattaagattatggtat 544
to top
>gb|AF307961.1|AF307961 Aptostichus simus clone COP 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  agtatataattaagattatggtat 41
           |||||| |||||||||||||||||
Sbjct: 521 agtataaaattaagattatggtat 544
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      agtggcagcaacaacaacaa 117
               ||||||||||||||||||||
Sbjct: 5187244 agtggcagcaacaacaacaa 5187225
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 192      ggcgagcgagttggagacca 211
                ||||||||||||||||||||
Sbjct: 28508650 ggcgagcgagttggagacca 28508669
to top
>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 198537

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 623   ctgtgggtcttgaccttatc 642
             ||||||||||||||||||||
Sbjct: 74567 ctgtgggtcttgaccttatc 74548
to top
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
              BACR02B16, complete sequence
          Length = 186938

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 108742 agtggcagcaacaacaacaa 108723
to top
>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete
              sequence
          Length = 237211

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    cagcaacaacaacaaaagat 122
              ||||||||||||||||||||
Sbjct: 183614 cagcaacaacaacaaaagat 183595
to top
>gb|AC007278.4| Homo sapiens BAC clone RP11-308G20 from 2, complete sequence
          Length = 162508

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   agcattctgggataatcagttcat 166
             ||||||||||||||| ||||||||
Sbjct: 37421 agcattctgggataagcagttcat 37444
to top
>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence
          Length = 190508

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    gtatcatctgccaccagatc 441
              ||||||||||||||||||||
Sbjct: 169597 gtatcatctgccaccagatc 169578
to top
>gb|BT003533.1| Drosophila melanogaster RE09535 full insert cDNA
          Length = 3333

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 937 agtggcagcaacaacaacaa 956
to top
>gb|AC055811.20| Homo sapiens chromosome 17, clone RP11-45M22, complete sequence
          Length = 143790

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gcagcaacaacaacaaaaga 121
              ||||||||||||||||||||
Sbjct: 111082 gcagcaacaacaacaaaaga 111063
to top
>gb|AC122716.2| Homo sapiens chromosome 5 clone RP11-567A12, complete sequence
          Length = 171057

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    cagcaacaacaacaaaagat 122
              ||||||||||||||||||||
Sbjct: 112952 cagcaacaacaacaaaagat 112971
to top
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0037D09
          Length = 140470

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ggcgagcgagttggagacca 211
             ||||||||||||||||||||
Sbjct: 74402 ggcgagcgagttggagacca 74421
to top
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ggcgagcgagttggagacca 211
             ||||||||||||||||||||
Sbjct: 66191 ggcgagcgagttggagacca 66210
to top
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1099H05
          Length = 186036

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    agtggcagcaacaacaacaa 117
             ||||||||||||||||||||
Sbjct: 55600 agtggcagcaacaacaacaa 55581
to top
>gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete sequence
          Length = 158347

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tagcagcagtagtagagtag 141
             ||||||||||||||||||||
Sbjct: 27406 tagcagcagtagtagagtag 27425
to top
>dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F02, full
           insert sequence
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 ggcgagcgagttggagacca 211
           ||||||||||||||||||||
Sbjct: 731 ggcgagcgagttggagacca 712
to top
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete
             sequence
          Length = 262557

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    agtggcagcaacaacaacaa 117
             ||||||||||||||||||||
Sbjct: 20420 agtggcagcaacaacaacaa 20401
to top
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
             sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    tgcacaaagtggcagcaacaacaa 114
             |||||||| |||||||||||||||
Sbjct: 16175 tgcacaaactggcagcaacaacaa 16198
to top
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete
             sequence
          Length = 425677

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   acaacaaaagatagcagcag 130
             ||||||||||||||||||||
Sbjct: 98708 acaacaaaagatagcagcag 98689
to top
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    caacaacaacaaaagatagc 125
              ||||||||||||||||||||
Sbjct: 165007 caacaacaacaaaagatagc 164988
to top
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete
              sequence
          Length = 305165

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 88     gagtgcacaaagtggcagcaacaacaacaaaa 119
              |||||||| ||| ||||| |||||||||||||
Sbjct: 165880 gagtgcacgaagcggcaggaacaacaacaaaa 165911
to top
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete
             sequence
          Length = 239958

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 62877 cagcaacaacaacaaaagat 62858
to top
>gb|AC153864.5| Mus musculus 10 BAC RP23-345N8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196411

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    cagcaacaacaacaaaagat 122
              ||||||||||||||||||||
Sbjct: 147266 cagcaacaacaacaaaagat 147247
to top
>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
              sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    cagcaacaacaacaaaagat 122
              ||||||||||||||||||||
Sbjct: 190041 cagcaacaacaacaaaagat 190060
to top
>gb|BT001800.1| Drosophila melanogaster RH29074 full insert cDNA
          Length = 2760

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 405 agtggcagcaacaacaacaa 424
to top
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence
          Length = 192344

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   caacaacaacaaaagatagc 125
             ||||||||||||||||||||
Sbjct: 40621 caacaacaacaaaagatagc 40602
to top
>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence
          Length = 159880

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 27629 cagcaacaacaacaaaagat 27648
to top
>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence
          Length = 159472

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 37592 cagcaacaacaacaaaagat 37573
to top
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence
          Length = 237728

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 103    cagcaacaacaacaaaagatagca 126
              ||||||||||||||||||| ||||
Sbjct: 185293 cagcaacaacaacaaaagagagca 185316
to top
>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete
              sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gcagcaacaacaacaaaaga 121
              ||||||||||||||||||||
Sbjct: 112867 gcagcaacaacaacaaaaga 112886
to top
>gb|U70874.1|DMU70874 Drosophila melanogaster hepatocyte nuclear factor 4 homolog
           (HNF-4(D)) mRNA, complete cds
          Length = 2964

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  agtggcagcaacaacaacaa 117
           ||||||||||||||||||||
Sbjct: 652 agtggcagcaacaacaacaa 671
to top
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     tagcagcagtagtagagtag 141
               ||||||||||||||||||||
Sbjct: 1251550 tagcagcagtagtagagtag 1251569
to top
>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete
             sequence
          Length = 196017

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cagcaacaacaacaaaagat 122
             ||||||||||||||||||||
Sbjct: 84580 cagcaacaacaacaaaagat 84561
to top
>emb|AJ009613.4|HSAJ9613 Homo sapiens chromosome 17 sequence from cosmid 5L05 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 43241

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gcagcaacaacaacaaaaga 121
             ||||||||||||||||||||
Sbjct: 15988 gcagcaacaacaacaaaaga 16007
to top
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete
              sequence
          Length = 217726

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gcagcaacaacaacaaaaga 121
              ||||||||||||||||||||
Sbjct: 187217 gcagcaacaacaacaaaaga 187236
to top
>gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome 14, complete sequence
          Length = 195329

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     agtggcagcaacaacaacaa 117
              ||||||||||||||||||||
Sbjct: 168595 agtggcagcaacaacaacaa 168576
to top
>dbj|AB055144.1| Halocynthia roretzi Hremx mRNA for transcription factor ems/emx,
            complete cds
          Length = 2401

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 103  cagcaacaacaacaaaagatagca 126
            ||||||||||||||| ||||||||
Sbjct: 1740 cagcaacaacaacaagagatagca 1763


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,315,353
Number of Sequences: 3902068
Number of extensions: 7315353
Number of successful extensions: 265005
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 264300
Number of HSP's gapped (non-prelim): 703
length of query: 718
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 695
effective length of database: 17,143,297,704
effective search space: 11914591904280
effective search space used: 11914591904280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top