ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28p24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 254 3e-64
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 254 3e-64
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 254 3e-64
4ref|NM_194965.1| Oryza sativa (japonica cultivar-group) putative... 68 4e-08
5dbj|AK111889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
6gb|BT013791.1| Lycopersicon esculentum clone 132711R, mRNA sequence 60 1e-05
7gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
10ref|NM_129656.2| Arabidopsis thaliana UBP5 (UBIQUITIN-SPECIFIC P... 56 2e-04
11gb|BT000300.1| Arabidopsis thaliana putative ubiquitin carboxyl ... 56 2e-04
12gb|AY099701.1| Arabidopsis thaliana putative ubiquitin carboxyl ... 56 2e-04
13gb|AC002409.3| Arabidopsis thaliana chromosome 2 clone T20B5 map... 56 2e-04
14gb|AF048705.1|AF048705 Arabidopsis thaliana ubiquitin-specific p... 56 2e-04
15gb|AY104747.1| Zea mays PCO066213 mRNA sequence 50 0.009
16gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Ca... 46 0.15
17ref|NM_103019.2| Arabidopsis thaliana cysteine-type endopeptidas... 44 0.58
18emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4,... 44 0.58
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
20gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L... 44 0.58
21ref|NM_117127.1| Arabidopsis thaliana cysteine-type endopeptidas... 42 2.3
22ref|NM_179025.1| Arabidopsis thaliana cysteine-type endopeptidas... 42 2.3
23gb|AC119953.15| Mus musculus chromosome 16, clone RP24-449J13, c... 42 2.3
24ref|XM_866609.1| PREDICTED: Bos taurus similar to ubiquitin spec... 42 2.3
25ref|XM_584767.2| PREDICTED: Bos taurus similar to ubiquitin spec... 42 2.3
26emb|CT009698.8| Mouse DNA sequence from clone RP23-117P22 on chr... 42 2.3
27emb|Z49067.1|CEC44F1 Caenorhabditis elegans Cosmid C44F1, comple... 42 2.3
28gb|BT010363.1| Arabidopsis thaliana At4g10590 mRNA, complete cds 42 2.3
29emb|AL928686.2| Human DNA sequence from clone RP11-444D14 on chr... 42 2.3
30emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, ... 42 2.3
31emb|AL049523.1|ATT4F9 Arabidopsis thaliana DNA chromosome 4, BAC... 42 2.3
32gb|AC021081.5| Homo sapiens chromosome 5 clone CTC-213A3, comple... 42 2.3
33gb|AY054463.1| Arabidopsis thaliana putative protein (At4g10590;... 42 2.3
34ref|NM_065364.2| Caenorhabditis elegans Adenylyl CYclase family ... 42 2.3
35gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, comple... 42 2.3
36gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7 42 2.3
37gb|AC004495.1| Homo sapiens chromosome 16, cosmid clone 400H11 (... 40 9.1
38gb|AY129336.1| Mycobacteriophage Che9d, complete genome 40 9.1
39gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome... 40 9.1
40gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome... 40 9.1
41emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in l... 40 9.1
42gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, comple... 40 9.1
43ref|XM_844514.1| PREDICTED: Canis familiaris similar to G protei... 40 9.1
44gb|AE004379.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 9.1
45gb|AC126567.8| Homo sapiens 3 BAC RP11-656G9 (Roswell Park Cance... 40 9.1
46gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's H... 40 9.1
47gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, com... 40 9.1
48gb|AC164653.3| Gallus gallus BAC clone CH261-187D17 from chromos... 40 9.1
49emb|CR352917.1| Gallus gallus finished cDNA, clone ChEST402f19 40 9.1
50emb|BX322604.9| Zebrafish DNA sequence from clone DKEY-10N19 in ... 40 9.1
51emb|BX005445.10| Zebrafish DNA sequence from clone DKEYP-72A4 in... 40 9.1
52gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complet... 40 9.1
53dbj|AK130579.1| Homo sapiens cDNA FLJ27069 fis, clone SPL01503 40 9.1
54gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Rosw... 40 9.1
55dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.1 
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score =  254 bits (128), Expect = 3e-64
 Identities = 240/275 (87%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                          
Query: 385    ctttatgtaagcggtataatgcccactcgccatgctaccataatgattgctaacagcata 444
              ||||||||| || |||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 150101 ctttatgtatgctgtataatgtccacttgccatgctgccataatgattgctcacagcata 150042

                                                                          
Query: 445    cagctcataagtttgacg--ctgagatat-cttgttagcaatatagttcgtcaaatccaa 501
              || ||||||  | || ||  ||||| | | |||||| ||||||||||| |||||||| ||
Sbjct: 150041 caactcatatatctggcgttctgagctcttcttgttggcaatatagtttgtcaaatcaaa 149982

                                                                          
Query: 502    gtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaatga 561
               |||||||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct: 149981 atcatgtattgggaagttgacaaatgtttcaagcttctgctttgttgacctactaaagga 149922

                                                                          
Query: 562    aaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagctttttact 621
               |||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||
Sbjct: 149921 gaatctcttcaaatgtataactagcacttctggaagtctccataagtcaagctttttgct 149862

                                                 
Query: 622    agcttgcctttgctccttgcacctcggacagtacc 656
               ||||||||||||||||||||||||||||||||||
Sbjct: 149861 ggcttgcctttgctccttgcacctcggacagtacc 149827



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                          
Query: 276    taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 335
              ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 150420 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 150361

                                             
Query: 336    cagaaacatgactatcatcaaaattgtacca 366
              |||||||||| |||||||||||||| |||||
Sbjct: 150360 cagaaacatggctatcatcaaaattatacca 150330
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  254 bits (128), Expect = 3e-64
 Identities = 240/275 (87%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                            
Query: 385      ctttatgtaagcggtataatgcccactcgccatgctaccataatgattgctaacagcata 444
                ||||||||| || |||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 15740420 ctttatgtatgctgtataatgtccacttgccatgctgccataatgattgctcacagcata 15740361

                                                                            
Query: 445      cagctcataagtttgacg--ctgagatat-cttgttagcaatatagttcgtcaaatccaa 501
                || ||||||  | || ||  ||||| | | |||||| ||||||||||| |||||||| ||
Sbjct: 15740360 caactcatatatctggcgttctgagctcttcttgttggcaatatagtttgtcaaatcaaa 15740301

                                                                            
Query: 502      gtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaatga 561
                 |||||||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct: 15740300 atcatgtattgggaagttgacaaatgtttcaagcttctgctttgttgacctactaaagga 15740241

                                                                            
Query: 562      aaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagctttttact 621
                 |||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||
Sbjct: 15740240 gaatctcttcaaatgtataactagcacttctggaagtctccataagtcaagctttttgct 15740181

                                                   
Query: 622      agcttgcctttgctccttgcacctcggacagtacc 656
                 ||||||||||||||||||||||||||||||||||
Sbjct: 15740180 ggcttgcctttgctccttgcacctcggacagtacc 15740146



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                            
Query: 276      taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 335
                ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15740739 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15740680

                                               
Query: 336      cagaaacatgactatcatcaaaattgtacca 366
                |||||||||| |||||||||||||| |||||
Sbjct: 15740679 cagaaacatggctatcatcaaaattatacca 15740649
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  254 bits (128), Expect = 3e-64
 Identities = 240/275 (87%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                            
Query: 385      ctttatgtaagcggtataatgcccactcgccatgctaccataatgattgctaacagcata 444
                ||||||||| || |||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 15827797 ctttatgtatgctgtataatgtccacttgccatgctgccataatgattgctcacagcata 15827738

                                                                            
Query: 445      cagctcataagtttgacg--ctgagatat-cttgttagcaatatagttcgtcaaatccaa 501
                || ||||||  | || ||  ||||| | | |||||| ||||||||||| |||||||| ||
Sbjct: 15827737 caactcatatatctggcgttctgagctcttcttgttggcaatatagtttgtcaaatcaaa 15827678

                                                                            
Query: 502      gtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaatga 561
                 |||||||||||||| || ||||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct: 15827677 atcatgtattgggaagttgacaaatgtttcaagcttctgctttgttgacctactaaagga 15827618

                                                                            
Query: 562      aaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagctttttact 621
                 |||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||
Sbjct: 15827617 gaatctcttcaaatgtataactagcacttctggaagtctccataagtcaagctttttgct 15827558

                                                   
Query: 622      agcttgcctttgctccttgcacctcggacagtacc 656
                 ||||||||||||||||||||||||||||||||||
Sbjct: 15827557 ggcttgcctttgctccttgcacctcggacagtacc 15827523



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                            
Query: 276      taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 335
                ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15828116 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15828057

                                               
Query: 336      cagaaacatgactatcatcaaaattgtacca 366
                |||||||||| |||||||||||||| |||||
Sbjct: 15828056 cagaaacatggctatcatcaaaattatacca 15828026
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>ref|NM_194965.1| Oryza sativa (japonica cultivar-group) putative ubiquitin carboxyl
            terminal hydrolase (OSJNBa0050E08.11), mRNA
          Length = 2673

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 599  ctccataaatcaagctttttactagcttgcctttgctccttgcacctcggacagtaccac 658
            |||||||| ||||||||||| || |||||| | |||||| |||| |||||||||||||||
Sbjct: 2276 ctccataagtcaagctttttgctggcttgcttgtgctccgtgcatctcggacagtaccac 2217

              
Query: 659  at 660
            ||
Sbjct: 2216 at 2215
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>dbj|AK111889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072M05, full
            insert sequence
          Length = 3441

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 599  ctccataaatcaagctttttactagcttgcctttgctccttgcacctcggacagtaccac 658
            |||||||| ||||||||||| || |||||| | |||||| |||| |||||||||||||||
Sbjct: 2556 ctccataagtcaagctttttgctggcttgcttgtgctccgtgcatctcggacagtaccac 2497

              
Query: 659  at 660
            ||
Sbjct: 2496 at 2495
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>gb|BT013791.1| Lycopersicon esculentum clone 132711R, mRNA sequence
          Length = 3486

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 515  aaattaacaaaagtttccagcttatgcttagttgacctgctaaatgaaaatctcttcaaa 574
            ||||| |||||||||||||||||||||||  | |||| |||  ||||||| |||||||  
Sbjct: 2797 aaatttacaaaagtttccagcttatgcttcatggaccggctgtatgaaaacctcttcagg 2738

                                                                        
Query: 575  tgaataactaacacttctggtagtctccataaatcaagctttttactagcttgcctttgc 634
            || ||||| | |||||| || || ||||| | ||| | ||| ||||| ||||| ||| ||
Sbjct: 2737 tggataacaagcacttcaggaagcctccaaagatctaacttcttacttgcttgtcttcgc 2678

                                      
Query: 635  tccttgcacctcggacagtaccacat 660
            || |||||  | ||||| ||||||||
Sbjct: 2677 tctttgcatgtaggacaataccacat 2652
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>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050E08, complete sequence
          Length = 180499

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 599   ctccataaatcaagctttttactagcttgcctttgctccttgcacctcggacagtacc 656
             |||||||| ||||||||||| || |||||| | |||||| |||| |||||||||||||
Sbjct: 93355 ctccataagtcaagctttttgctggcttgcttgtgctccgtgcatctcggacagtacc 93412
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 599     ctccataaatcaagctttttactagcttgcctttgctccttgcacctcggacagtacc 656
               |||||||| ||||||||||| || |||||| | |||||| |||| |||||||||||||
Sbjct: 3811559 ctccataagtcaagctttttgctggcttgcttgtgctccgtgcatctcggacagtacc 3811616
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 599     ctccataaatcaagctttttactagcttgcctttgctccttgcacctcggacagtacc 656
               |||||||| ||||||||||| || |||||| | |||||| |||| |||||||||||||
Sbjct: 3811480 ctccataagtcaagctttttgctggcttgcttgtgctccgtgcatctcggacagtacc 3811537
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>ref|NM_129656.2| Arabidopsis thaliana UBP5 (UBIQUITIN-SPECIFIC PROTEASE 5);
            ubiquitin-specific protease AT2G40930 (UBP5) mRNA,
            complete cds
          Length = 3305

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 500  aagtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaat 559
            |||||||| || || || |||||||| ||||||| |||||||||  | ||||||||  ||
Sbjct: 2763 aagtcatgaatgggaaagttaacaaatgtttccaacttatgcttcatggacctgctgtat 2704

                                                                        
Query: 560  gaaaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagcttttta 619
            || |||||||| | ||| || ||||| || || || || ||||| | |||||||||||| 
Sbjct: 2703 gagaatctctttagatgtatgactaagacctcaggaagcctccacagatcaagctttttg 2644

                        
Query: 620  ctagcttgcctt 631
            || || ||||||
Sbjct: 2643 cttgcctgcctt 2632
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>gb|BT000300.1| Arabidopsis thaliana putative ubiquitin carboxyl terminal hydrolase
            (At2g40930) mRNA, complete cds
          Length = 2850

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 500  aagtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaat 559
            |||||||| || || || |||||||| ||||||| |||||||||  | ||||||||  ||
Sbjct: 2522 aagtcatgaatgggaaagttaacaaatgtttccaacttatgcttcatggacctgctgtat 2463

                                                                        
Query: 560  gaaaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagcttttta 619
            || |||||||| | ||| || ||||| || || || || ||||| | |||||||||||| 
Sbjct: 2462 gagaatctctttagatgtatgactaagacctcaggaagcctccacagatcaagctttttg 2403

                        
Query: 620  ctagcttgcctt 631
            || || ||||||
Sbjct: 2402 cttgcctgcctt 2391
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>gb|AY099701.1| Arabidopsis thaliana putative ubiquitin carboxyl terminal hydrolase
            (At2g40930) mRNA, complete cds
          Length = 3226

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 500  aagtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaat 559
            |||||||| || || || |||||||| ||||||| |||||||||  | ||||||||  ||
Sbjct: 2754 aagtcatgaatgggaaagttaacaaatgtttccaacttatgcttcatggacctgctgtat 2695

                                                                        
Query: 560  gaaaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagcttttta 619
            || |||||||| | ||| || ||||| || || || || ||||| | |||||||||||| 
Sbjct: 2694 gagaatctctttagatgtatgactaagacctcaggaagcctccacagatcaagctttttg 2635

                        
Query: 620  ctagcttgcctt 631
            || || ||||||
Sbjct: 2634 cttgcctgcctt 2623
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>gb|AC002409.3| Arabidopsis thaliana chromosome 2 clone T20B5 map CIC11C08, complete
             sequence
          Length = 72839

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                         
Query: 500   aagtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaat 559
             |||||||| || || || |||||||| ||||||| |||||||||  | ||||||||  ||
Sbjct: 46855 aagtcatgaatgggaaagttaacaaatgtttccaacttatgcttcatggacctgctgtat 46914

                                                                         
Query: 560   gaaaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagcttttta 619
             || |||||||| | ||| || ||||| || || || || ||||| | |||||||||||| 
Sbjct: 46915 gagaatctctttagatgtatgactaagacctcaggaagcctccacagatcaagctttttg 46974

                         
Query: 620   ctagcttgcctt 631
             || || ||||||
Sbjct: 46975 cttgcctgcctt 46986
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>gb|AF048705.1|AF048705 Arabidopsis thaliana ubiquitin-specific protease (UBP5) mRNA,
            complete cds
          Length = 3323

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 500  aagtcatgtattgggaaattaacaaaagtttccagcttatgcttagttgacctgctaaat 559
            |||||||| || || || |||||||| ||||||| |||||||||  | ||||||||  ||
Sbjct: 2763 aagtcatgaatgggaaagttaacaaatgtttccaacttatgcttcatggacctgctgtat 2704

                                                                        
Query: 560  gaaaatctcttcaaatgaataactaacacttctggtagtctccataaatcaagcttttta 619
            || |||||||| | ||| || ||||| || || || || ||||| | |||||||||||| 
Sbjct: 2703 gagaatctctttagatgtatgactaagacctcaggaagcctccacagatcaagctttttg 2644

                        
Query: 620  ctagcttgcctt 631
            || || ||||||
Sbjct: 2643 cttgcctgcctt 2632
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>gb|AY104747.1| Zea mays PCO066213 mRNA sequence
          Length = 1112

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 620 ctagcttgcctttgctccttgcacctcggacagtaccacat 660
           ||||||||||| || ||||||||||  ||||||||||||||
Sbjct: 286 ctagcttgcctgtgttccttgcacccaggacagtaccacat 246
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>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 179187

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 555   taaatgaaaatctcttcaaatga 577
             |||||||||||||||||||||||
Sbjct: 86365 taaatgaaaatctcttcaaatga 86387
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>ref|NM_103019.2| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin
            thiolesterase AT1G32850 mRNA, complete cds
          Length = 2679

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 421  accataatgattgctaacagcatacagctc 450
            |||||||||||||||||  |||||||||||
Sbjct: 2496 accataatgattgctaatcgcatacagctc 2467
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>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 196   ctcagattatctttggctagatctgc 221
             |||||||||| |||||||||||||||
Sbjct: 73362 ctcagattatgtttggctagatctgc 73387
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 196      ctcagattatctttggctagatctgc 221
                |||||||||| |||||||||||||||
Sbjct: 15886797 ctcagattatgtttggctagatctgc 15886822
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>gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L11 genomic sequence, complete
             sequence
          Length = 122836

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 421   accataatgattgctaacagcatacagctc 450
             |||||||||||||||||  |||||||||||
Sbjct: 26148 accataatgattgctaatcgcatacagctc 26119
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>ref|NM_117127.1| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin
            thiolesterase AT4G10590 transcript variant AT4G10590.1
            mRNA, complete cds
          Length = 3091

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 421  accataatgattgctaacagcatacagctcata 453
            |||||||||||| ||||| |||||||| |||||
Sbjct: 2714 accataatgattactaacggcatacagttcata 2682
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>ref|NM_179025.1| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin
            thiolesterase AT4G10590 transcript variant AT4G10590.2
            mRNA, complete cds
          Length = 3287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 421  accataatgattgctaacagcatacagctcata 453
            |||||||||||| ||||| |||||||| |||||
Sbjct: 2714 accataatgattactaacggcatacagttcata 2682
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>gb|AC119953.15| Mus musculus chromosome 16, clone RP24-449J13, complete sequence
          Length = 156473

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 613    ctttttactagcttgcctttg 633
              |||||||||||||||||||||
Sbjct: 125194 ctttttactagcttgcctttg 125214
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>ref|XM_866609.1| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 3
            (LOC508042), mRNA
          Length = 4634

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 286  gtagaacagcacgtaagctgc 306
            |||||||||||||||||||||
Sbjct: 3384 gtagaacagcacgtaagctgc 3364
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>ref|XM_584767.2| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 1
            (LOC508042), mRNA
          Length = 2573

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 286  gtagaacagcacgtaagctgc 306
            |||||||||||||||||||||
Sbjct: 1323 gtagaacagcacgtaagctgc 1303
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>emb|CT009698.8| Mouse DNA sequence from clone RP23-117P22 on chromosome 16, complete
              sequence
          Length = 210485

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 613    ctttttactagcttgcctttg 633
              |||||||||||||||||||||
Sbjct: 165040 ctttttactagcttgcctttg 165020
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>emb|Z49067.1|CEC44F1 Caenorhabditis elegans Cosmid C44F1, complete sequence
          Length = 19201

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   caattccacacacaaaaagga 155
             |||||||||||||||||||||
Sbjct: 18804 caattccacacacaaaaagga 18824
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>gb|BT010363.1| Arabidopsis thaliana At4g10590 mRNA, complete cds
          Length = 2733

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 421  accataatgattgctaacagcatacagctcata 453
            |||||||||||| ||||| |||||||| |||||
Sbjct: 2538 accataatgattactaacggcatacagttcata 2506
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>emb|AL928686.2| Human DNA sequence from clone RP11-444D14 on chromosome 10 Contains
            the PRKG1 gene for protein kinase cGMP-dependent type I,
            complete sequence
          Length = 11812

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 515  aaattaacaaaagtttccagc 535
            |||||||||||||||||||||
Sbjct: 2174 aaattaacaaaagtttccagc 2194
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>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29
          Length = 199861

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 421    accataatgattgctaacagcatacagctcata 453
              |||||||||||| ||||| |||||||| |||||
Sbjct: 171510 accataatgattactaacggcatacagttcata 171542
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>emb|AL049523.1|ATT4F9 Arabidopsis thaliana DNA chromosome 4, BAC clone  T4F9 (ESSA project)
          Length = 78530

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 421   accataatgattgctaacagcatacagctcata 453
             |||||||||||| ||||| |||||||| |||||
Sbjct: 24014 accataatgattactaacggcatacagttcata 24046
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>gb|AC021081.5| Homo sapiens chromosome 5 clone CTC-213A3, complete sequence
          Length = 71823

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 536   ttatgcttagttgacctgcta 556
             |||||||||||||||||||||
Sbjct: 40971 ttatgcttagttgacctgcta 40951
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>gb|AY054463.1| Arabidopsis thaliana putative protein (At4g10590; T4F9.50) mRNA,
            complete cds
          Length = 3092

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 421  accataatgattgctaacagcatacagctcata 453
            |||||||||||| ||||| |||||||| |||||
Sbjct: 2715 accataatgattactaacggcatacagttcata 2683
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>ref|NM_065364.2| Caenorhabditis elegans Adenylyl CYclase family member (acy-3) (acy-3)
            mRNA, complete cds
          Length = 3608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 135  caattccacacacaaaaagga 155
            |||||||||||||||||||||
Sbjct: 1294 caattccacacacaaaaagga 1274
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>gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, complete sequence
          Length = 149115

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 536    ttatgcttagttgacctgcta 556
              |||||||||||||||||||||
Sbjct: 110059 ttatgcttagttgacctgcta 110039
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>gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7
          Length = 102216

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 421   accataatgattgctaacagcatacagctcata 453
             |||||||||||| ||||| |||||||| |||||
Sbjct: 35117 accataatgattactaacggcatacagttcata 35085
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>gb|AC004495.1| Homo sapiens chromosome 16, cosmid clone 400H11 (LANL), complete
             sequence
          Length = 35528

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   acacacaaaaaggaaccaaa 161
             ||||||||||||||||||||
Sbjct: 20034 acacacaaaaaggaaccaaa 20015
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>gb|AY129336.1| Mycobacteriophage Che9d, complete genome
          Length = 56276

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   tgcttgctgctccatctgct 271
             ||||||||||||||||||||
Sbjct: 12404 tgcttgctgctccatctgct 12385
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>gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome 3, complete sequence
          Length = 166604

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   aatgaaaatctcttcaaatg 576
             ||||||||||||||||||||
Sbjct: 36478 aatgaaaatctcttcaaatg 36459
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>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tgctgctccatctgcttctg 275
              ||||||||||||||||||||
Sbjct: 149175 tgctgctccatctgcttctg 149194
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>emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in linkage group 1, complete
             sequence
          Length = 170755

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   tagttgacctgctaaatgaa 562
             ||||||||||||||||||||
Sbjct: 52710 tagttgacctgctaaatgaa 52729
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>gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, complete sequence
          Length = 203057

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   aatgaaaatctcttcaaatg 576
             ||||||||||||||||||||
Sbjct: 53043 aatgaaaatctcttcaaatg 53062
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>ref|XM_844514.1| PREDICTED: Canis familiaris similar to G protein pathway suppressor
           2 (LOC607730), mRNA
          Length = 1084

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 tgctccatctgcttctgtaa 278
           ||||||||||||||||||||
Sbjct: 858 tgctccatctgcttctgtaa 839
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>gb|AE004379.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 36
            of 93 of the complete chromosome
          Length = 10020

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 605  aaatcaagctttttactagc 624
            ||||||||||||||||||||
Sbjct: 6995 aaatcaagctttttactagc 6976
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>gb|AC126567.8| Homo sapiens 3 BAC RP11-656G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 150746

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 555  taaatgaaaatctcttcaaatgaa 578
            ||||||| ||||||||||||||||
Sbjct: 2903 taaatgagaatctcttcaaatgaa 2880
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>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 143322

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   tcattgatggcagaaacatg 345
             ||||||||||||||||||||
Sbjct: 24211 tcattgatggcagaaacatg 24230
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>gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, complete sequence
          Length = 183604

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   attccacacacaaaaaggaa 156
             ||||||||||||||||||||
Sbjct: 50939 attccacacacaaaaaggaa 50920
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>gb|AC164653.3| Gallus gallus BAC clone CH261-187D17 from chromosome unknown, complete
             sequence
          Length = 224272

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gcacctgacttcacttcttc 324
             ||||||||||||||||||||
Sbjct: 59431 gcacctgacttcacttcttc 59450
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>emb|CR352917.1| Gallus gallus finished cDNA, clone ChEST402f19
          Length = 794

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ttccattgcttgctgctcca 265
           ||||||||||||||||||||
Sbjct: 501 ttccattgcttgctgctcca 482
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>emb|BX322604.9| Zebrafish DNA sequence from clone DKEY-10N19 in linkage group 5,
             complete sequence
          Length = 175983

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   tccataaatcaagcttttta 619
             ||||||||||||||||||||
Sbjct: 69067 tccataaatcaagcttttta 69086
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>emb|BX005445.10| Zebrafish DNA sequence from clone DKEYP-72A4 in linkage group 5,
             complete sequence
          Length = 123526

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   tccataaatcaagcttttta 619
             ||||||||||||||||||||
Sbjct: 95038 tccataaatcaagcttttta 95019
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>gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complete sequence
          Length = 165196

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  acacacaaaaaggaaccaaa 161
            ||||||||||||||||||||
Sbjct: 8427 acacacaaaaaggaaccaaa 8446
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>dbj|AK130579.1| Homo sapiens cDNA FLJ27069 fis, clone SPL01503
          Length = 2632

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  acacacaaaaaggaaccaaa 161
            ||||||||||||||||||||
Sbjct: 2177 acacacaaaaaggaaccaaa 2158
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>gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 136037

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 515   aaattaacaaaagtttccagctta 538
             ||||||||| ||||||||||||||
Sbjct: 50101 aaattaacacaagtttccagctta 50078
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>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete
            sequences
          Length = 96727

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gtttcacacatgactgggtt 247
            ||||||||||||||||||||
Sbjct: 5216 gtttcacacatgactgggtt 5235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,943,056
Number of Sequences: 3902068
Number of extensions: 5943056
Number of successful extensions: 119016
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118755
Number of HSP's gapped (non-prelim): 261
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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