ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28p22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor 31 1.7
2PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 31 1.7
3TESK2_RAT (Q924U5) Dual specificity testis-specific protein kina... 30 3.8
4TESK2_HUMAN (Q96S53) Dual specificity testis-specific protein ki... 29 8.5

>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor|
          Length = 674

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = -1

Query: 471 KSGNEKKLNAFFELATACCSPSPSLRPNTKDILRRLED 358
           +S  E+ L    +LA  CC+P  ++RP+ ++++++LE+
Sbjct: 614 RSPMEEGLVHALKLAMGCCAPVTTVRPSMEEVVKQLEE 651



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 462  NEKKLNAFFELATACCSPSPSLRPNTKDILRRLEDI 355
            N+K++    E+A  C S +P  RP T+ ++  L+D+
Sbjct: 973  NDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLDDV 1008



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>TESK2_RAT (Q924U5) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 570

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 441 FFELATACCSPSPSLRPNTKDILRRLEDI 355
           F +L   CC+  P LRP+ ++I + LE+I
Sbjct: 284 FLQLTFNCCNMDPKLRPSFEEIGKTLEEI 312



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>TESK2_HUMAN (Q96S53) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 571

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 441 FFELATACCSPSPSLRPNTKDILRRLEDI 355
           F +L   CC+  P LRP+  +I + LE+I
Sbjct: 284 FLQLTFNCCNMDPKLRPSFVEIGKTLEEI 312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,422,135
Number of Sequences: 219361
Number of extensions: 1096186
Number of successful extensions: 3009
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3009
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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