ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA 190 3e-45
2dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
3gb|AY103914.1| Zea mays PCO130298 mRNA sequence 157 4e-35
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
5dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
6ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 6e-06
8gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 60 6e-06
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
10dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
11dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
12gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence 50 0.006
13gb|BC055499.1| Danio rerio zgc:66127, mRNA (cDNA clone MGC:66127... 50 0.006
14ref|NM_200495.1| Danio rerio zgc:66127 (zgc:66127), mRNA 50 0.006
15ref|NM_057587.3| Drosophila melanogaster RNA-binding protein 4 C... 50 0.006
16gb|AY089457.1| Drosophila melanogaster AT27014 full insert cDNA 50 0.006
17gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, r... 50 0.006
18gb|AY105580.1| Zea mays PCO127552 mRNA sequence 50 0.006
19gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39... 50 0.006
20gb|U18401.1|DMU18401 Drosophila melanogaster testis-specific-RRM... 50 0.006
21ref|NM_180361.1| Arabidopsis thaliana CP29; RNA binding AT3G5346... 48 0.024
22ref|NM_115206.2| Arabidopsis thaliana CP29; RNA binding AT3G5346... 48 0.024
23gb|AY077674.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, co... 48 0.024
24gb|AY039909.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, co... 48 0.024
25emb|BX823854.1|CNS0A6O5 Arabidopsis thaliana Full-length cDNA Co... 48 0.024
26emb|BX823838.1|CNS0A6NK Arabidopsis thaliana Full-length cDNA Co... 48 0.024
27emb|BX823223.1|CNS0A6II Arabidopsis thaliana Full-length cDNA Co... 48 0.024
28gb|AY087840.1| Arabidopsis thaliana clone 38888 mRNA, complete s... 48 0.024
29dbj|D31711.1|ATHCP29B Arabidopsis thaliana mRNA for chloroplast ... 48 0.024
30dbj|D31710.1|ATHCP29A Arabidopsis thaliana gene for chloroplast ... 48 0.024
31emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.024
32ref|XM_520688.1| PREDICTED: Pan troglodytes similar to solute ca... 44 0.38
33gb|DQ062785.1| Drosophila simulans heterogeneous nuclear ribonuc... 44 0.38
34gb|DQ062784.1| Drosophila melanogaster heterogeneous nuclear rib... 44 0.38
35emb|X62639.1|DMHRP481 D.melanogaster mRNA for hrp48.1 44 0.38
36gb|AY128430.1| Drosophila melanogaster GH26816 full insert cDNA 44 0.38
37ref|NM_164721.1| Drosophila melanogaster Heterogeneous nuclear r... 44 0.38
38ref|NM_164720.1| Drosophila melanogaster Heterogeneous nuclear r... 44 0.38
39ref|NM_057521.3| Drosophila melanogaster Heterogeneous nuclear r... 44 0.38
40gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, comple... 44 0.38
41dbj|AK152002.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.38
42dbj|AK151930.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.38
43gb|AY069699.1| Drosophila melanogaster LD46853 full length cDNA 44 0.38
44gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27... 44 0.38
45gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, ... 44 0.38
46dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
47gb|AC084239.1|AC084239 Homo sapiens chromosome 19, BAC CTC-512J1... 44 0.38
48gb|AC138473.1| Homo sapiens chromosome 19 clone CTC-512J12, comp... 44 0.38
49dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
50gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24... 44 0.38
51gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 ... 44 0.38
52gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, compl... 44 0.38
53gb|AF025422.1|AF025422 Homo sapiens chromosome 19 cosmid F15386,... 44 0.38
54gb|U21164.1|HSU21164 Human dopamine D5 receptor gene, 5' flankin... 44 0.38
55ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
56ref|XM_955833.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
57ref|XM_326861.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
58gb|AC146594.3| Mus musculus BAC clone RP24-155O13 from chromosom... 42 1.5
59emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cos... 42 1.5
60emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosm... 42 1.5
61gb|S51720.1| RNA recognition motif-type RNA-binding protein {RRM... 42 1.5
62gb|AC138775.3| Homo sapiens BAC clone RP11-1247B7 from chromosom... 42 1.5
63dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
64dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
65dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
66ref|NM_001003155.1| Canis familiaris parathyroid hormone recepto... 40 5.9
67gb|AY524035.1| Mimulus lewisii floricaula (FLO) mRNA, FLOA paral... 40 5.9
68gb|AC136091.2| Rattus norvegicus 18 BAC CH230-329A5 (Children's ... 40 5.9
69ref|XM_753501.1| Ustilago maydis 521 hypothetical protein (UM024... 40 5.9
70gb|AC123832.4| Mus musculus BAC clone RP24-126O19 from chromosom... 40 5.9
71emb|AL161788.13| Human DNA sequence from clone RP11-421B23 on ch... 40 5.9
72gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.9
73ref|NM_144354.2| Drosophila melanogaster SF2 CG6987-RA (SF2), mRNA 40 5.9
74gb|AY051919.1| Drosophila melanogaster LD40489 full length cDNA 40 5.9
75dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
76gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, r... 40 5.9
77gb|AF234157.1|AF234157 Drosophila melanogaster SR family splicin... 40 5.9
78gb|AF232773.1|AF232773 Drosophila melanogaster SR family splicin... 40 5.9
79gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, r... 40 5.9
80gb|AC144940.5| Mus musculus BAC clone RP23-429A10 from chromosom... 40 5.9
81dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
82dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
83ref|XM_321004.2| Anopheles gambiae str. PEST ENSANGP00000019861 ... 40 5.9
84gb|AF167095.1|AF167095 Canis familiaris parathyroid hormone rece... 40 5.9
85gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50... 40 5.9
86gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.9
87emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chr... 40 5.9
88dbj|D88440.1| Gallus gallus mRNA for high molecular mass nuclear... 40 5.9 
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score =  190 bits (96), Expect = 3e-45
 Identities = 227/270 (84%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 147 ggcttcgactctgccacggtaacccggatctgcctgccgtcaaggtccactccgtcgagg 206
           ||||| || ||||| || ||||| ||||||||||||||||| ||||| || ||||| || 
Sbjct: 843 ggctttgattctgcaactgtaactcggatctgcctgccgtccaggtcaacgccgtcaaga 784

                                                                       
Query: 207 tttgagatcgcattgttgacctcatcagcagagccataggtgacgaagccaaagcccctc 266
           ||||| || ||||||||||| || ||||| |||||||||||||| || ||||| ||||||
Sbjct: 783 tttgatatggcattgttgacttcttcagcggagccataggtgacaaaaccaaaacccctc 724

                                                                       
Query: 267 gacctgccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctg 326
           ||||||||||| |||| ||| ||||||||||| ||||| |||||  |||| || || |||
Sbjct: 723 gacctgccgctctccctgtcgtagatgaccttggcatcgagcacggttccctgctcactg 664

                                                                       
Query: 327 aacaggttctcaagcgttgagttgtnaacaccccangataggtttcccgacgtagagctt 386
           ||||||||||| || || |||||||  |||||||| |  ||| ||||| || ||||||||
Sbjct: 663 aacaggttctcgagtgtcgagttgtcgacaccccaagcaagg-ttccctacatagagctt 605

                                         
Query: 387 gttggctgaatcaaagctgccgccaccacc 416
           ||||| |||||||||| |||  ||||||||
Sbjct: 604 gttggatgaatcaaagttgctcccaccacc 575
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>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full
           insert sequence
          Length = 1052

 Score =  190 bits (96), Expect = 3e-45
 Identities = 227/270 (84%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 147 ggcttcgactctgccacggtaacccggatctgcctgccgtcaaggtccactccgtcgagg 206
           ||||| || ||||| || ||||| ||||||||||||||||| ||||| || ||||| || 
Sbjct: 843 ggctttgattctgcaactgtaactcggatctgcctgccgtccaggtcaacgccgtcaaga 784

                                                                       
Query: 207 tttgagatcgcattgttgacctcatcagcagagccataggtgacgaagccaaagcccctc 266
           ||||| || ||||||||||| || ||||| |||||||||||||| || ||||| ||||||
Sbjct: 783 tttgatatggcattgttgacttcttcagcggagccataggtgacaaaaccaaaacccctc 724

                                                                       
Query: 267 gacctgccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctg 326
           ||||||||||| |||| ||| ||||||||||| ||||| |||||  |||| || || |||
Sbjct: 723 gacctgccgctctccctgtcgtagatgaccttggcatcgagcacggttccctgctcactg 664

                                                                       
Query: 327 aacaggttctcaagcgttgagttgtnaacaccccangataggtttcccgacgtagagctt 386
           ||||||||||| || || |||||||  |||||||| |  ||| ||||| || ||||||||
Sbjct: 663 aacaggttctcgagtgtcgagttgtcgacaccccaagcaagg-ttccctacatagagctt 605

                                         
Query: 387 gttggctgaatcaaagctgccgccaccacc 416
           ||||| |||||||||| |||  ||||||||
Sbjct: 604 gttggatgaatcaaagttgctcccaccacc 575
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>gb|AY103914.1| Zea mays PCO130298 mRNA sequence
          Length = 1127

 Score =  157 bits (79), Expect = 4e-35
 Identities = 185/219 (84%), Gaps = 4/219 (1%)
 Strand = Plus / Minus

                                                                       
Query: 204 aggtttgagatcgcattgttgacctcatcagcagagccataggtgacgaagccaaagccc 263
           |||||||| || |||||||||||||| || |||||||||||||||||||| ||||| |||
Sbjct: 773 aggtttgatatggcattgttgacctcctcggcagagccataggtgacgaaaccaaacccc 714

                                                                       
Query: 264 ctcgacctgccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcg 323
           || ||||||||||| |||| ||| ||||||||||||||||| ||||||| |||||| || 
Sbjct: 713 cttgacctgccgctatccctgtcgtagatgaccttagcatccagcacctgtccttgctca 654

                                                                       
Query: 324 ctgaacaggttctcaagcgttgagttgtnaacaccccangataggtttcccgacgtagag 383
           ||||| |||||||| || || ||||||| ||| ||||| |  ||||| ||| ||||| | 
Sbjct: 653 ctgaataggttctccagagtcgagttgtcaacgccccatgcaaggttcccc-acgtatac 595

                                                  
Query: 384 cttgttggctgaatc---aaagctgccgccaccaccacc 419
           ||||||  |||||||   |||||||||||| || |||||
Sbjct: 594 cttgttccctgaatcgacaaagctgccgccgccgccacc 556
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  153 bits (77), Expect = 6e-34
 Identities = 184/219 (84%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                            
Query: 198      ccgtcgaggtttgagatcgcattgttgacctcatcagcagagccataggtgacgaagcca 257
                ||||| || ||||| || ||||||||||| || ||||| |||||||||||||| || |||
Sbjct: 26159846 ccgtcaagatttgatatggcattgttgacttcttcagcggagccataggtgacaaaacca 26159787

                                                                            
Query: 258      aagcccctcgacctgccgctgtcccggtcatagatgaccttagcatcaagcacctttcct 317
                || ||||||||||||||||| |||| ||| ||||||||||| ||||| |||||  |||| 
Sbjct: 26159786 aaacccctcgacctgccgctctccctgtcgtagatgaccttggcatcgagcacggttccc 26159727

                                                                            
Query: 318      tgttcgctgaacaggttctcaagcgttgagttgtnaacaccccangataggtttcccgac 377
                || || |||||||||||||| || || |||||||  |||||||| |  ||| ||||| ||
Sbjct: 26159726 tgctcactgaacaggttctcgagtgtcgagttgtcgacaccccaagcaagg-ttccctac 26159668

                                                       
Query: 378      gtagagcttgttggctgaatcaaagctgccgccaccacc 416
                 ||||||||||||| |||||||||| |||  ||||||||
Sbjct: 26159667 atagagcttgttggatgaatcaaagttgctcccaccacc 26159629



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 147      ggcttcgactctgccacggtaacccggatctgcctgccgtcaaggtcc 194
                ||||| || ||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 26160052 ggctttgattctgcaactgtaactcggatctgcctgccgtccaggtcc 26160005
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score =  153 bits (77), Expect = 6e-34
 Identities = 184/219 (84%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                         
Query: 198   ccgtcgaggtttgagatcgcattgttgacctcatcagcagagccataggtgacgaagcca 257
             ||||| || ||||| || ||||||||||| || ||||| |||||||||||||| || |||
Sbjct: 51704 ccgtcaagatttgatatggcattgttgacttcttcagcggagccataggtgacaaaacca 51645

                                                                         
Query: 258   aagcccctcgacctgccgctgtcccggtcatagatgaccttagcatcaagcacctttcct 317
             || ||||||||||||||||| |||| ||| ||||||||||| ||||| |||||  |||| 
Sbjct: 51644 aaacccctcgacctgccgctctccctgtcgtagatgaccttggcatcgagcacggttccc 51585

                                                                         
Query: 318   tgttcgctgaacaggttctcaagcgttgagttgtnaacaccccangataggtttcccgac 377
             || || |||||||||||||| || || |||||||  |||||||| |  ||| ||||| ||
Sbjct: 51584 tgctcactgaacaggttctcgagtgtcgagttgtcgacaccccaagcaagg-ttccctac 51526

                                                    
Query: 378   gtagagcttgttggctgaatcaaagctgccgccaccacc 416
              ||||||||||||| |||||||||| |||  ||||||||
Sbjct: 51525 atagagcttgttggatgaatcaaagttgctcccaccacc 51487



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 147   ggcttcgactctgccacggtaacccggatctgcctgccgtcaaggtcc 194
             ||||| || ||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 51910 ggctttgattctgcaactgtaactcggatctgcctgccgtccaggtcc 51863
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>ref|XM_470714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 798

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 225 acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
           ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 701 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 642

                         
Query: 285 tcatagatgacctt 298
           ||||||||||||||
Sbjct: 641 tcatagatgacctt 628
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 225      acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
                ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 14705325 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 14705384

                              
Query: 285      tcatagatgacctt 298
                ||||||||||||||
Sbjct: 14705385 tcatagatgacctt 14705398
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>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 225   acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
             ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 44237 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 44296

                           
Query: 285   tcatagatgacctt 298
             ||||||||||||||
Sbjct: 44297 tcatagatgacctt 44310
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 225      acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
                ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 14699859 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 14699918

                              
Query: 285      tcatagatgacctt 298
                ||||||||||||||
Sbjct: 14699919 tcatagatgacctt 14699932
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>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full
           insert sequence
          Length = 1112

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 225 acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
           ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 784 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 725

                         
Query: 285 tcatagatgacctt 298
           ||||||||||||||
Sbjct: 724 tcatagatgacctt 711
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>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full
           insert sequence
          Length = 1172

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 225 acctcatcagcagagccataggtgacgaagccaaagcccctcgacctgccgctgtcccgg 284
           ||||| ||||| || ||||| ||||| || ||||| ||||| |||||||| || |||| |
Sbjct: 792 acctcttcagcggaaccatacgtgacaaaaccaaatccccttgacctgccactctccctg 733

                         
Query: 285 tcatagatgacctt 298
           ||||||||||||||
Sbjct: 732 tcatagatgacctt 719
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>gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence
          Length = 1109

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 147 ggcttcgactctgccacggtaacccggatctgcctgccgtc 187
           |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 297 ggcttcgactctgctaccgtaacacggatctgtctgccgtc 337
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>gb|BC055499.1| Danio rerio zgc:66127, mRNA (cDNA clone MGC:66127 IMAGE:2642049),
           complete cds
          Length = 1513

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 243 taggtgacgaagccaaagcccctcgacct 271
           ||||||||||||||||| |||||||||||
Sbjct: 209 taggtgacgaagccaaatcccctcgacct 181
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>ref|NM_200495.1| Danio rerio zgc:66127 (zgc:66127), mRNA
          Length = 1513

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 243 taggtgacgaagccaaagcccctcgacct 271
           ||||||||||||||||| |||||||||||
Sbjct: 209 taggtgacgaagccaaatcccctcgacct 181
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>ref|NM_057587.3| Drosophila melanogaster RNA-binding protein 4 CG9654-RA (Rbp4),
           mRNA
          Length = 1518

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 241 cataggtgacgaagccaaagcccct 265
           |||||||||||||||||||||||||
Sbjct: 331 cataggtgacgaagccaaagcccct 307
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>gb|AY089457.1| Drosophila melanogaster AT27014 full insert cDNA
          Length = 1499

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 241 cataggtgacgaagccaaagcccct 265
           |||||||||||||||||||||||||
Sbjct: 297 cataggtgacgaagccaaagcccct 273
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>gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone
             BACR03J04, complete sequence
          Length = 179454

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 241   cataggtgacgaagccaaagcccct 265
             |||||||||||||||||||||||||
Sbjct: 74385 cataggtgacgaagccaaagcccct 74409
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>gb|AY105580.1| Zea mays PCO127552 mRNA sequence
          Length = 1133

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 147 ggcttcgactctgccacggtaacccggatctgcctgccgtc 187
           |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 834 ggcttcgactctgctaccgtaacacggatctgtctgccgtc 794
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>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the
             complete sequence
          Length = 208368

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 241   cataggtgacgaagccaaagcccct 265
             |||||||||||||||||||||||||
Sbjct: 55459 cataggtgacgaagccaaagcccct 55483
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>gb|U18401.1|DMU18401 Drosophila melanogaster testis-specific-RRM-protein (Tsr) gene,
           complete cds
          Length = 1833

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 241 cataggtgacgaagccaaagcccct 265
           |||||||||||||||||||||||||
Sbjct: 370 cataggtgacgaagccaaagcccct 346
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>ref|NM_180361.1| Arabidopsis thaliana CP29; RNA binding AT3G53460 (CP29) transcript
           variant AT3G53460.2 mRNA, complete cds
          Length = 1157

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 942 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 883

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 882 ttctcaag 875
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>ref|NM_115206.2| Arabidopsis thaliana CP29; RNA binding AT3G53460 (CP29) transcript
           variant AT3G53460.1 mRNA, complete cds
          Length = 1548

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 966 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 907

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 906 ttctcaag 899
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>gb|AY077674.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, complete cds
          Length = 1029

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 884 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 825

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 824 ttctcaag 817
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>gb|AY039909.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, complete cds
          Length = 1549

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 980 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 921

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 920 ttctcaag 913
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>emb|BX823854.1|CNS0A6O5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS83ZG08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1450

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 953 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 894

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 893 ttctcaag 886
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>emb|BX823838.1|CNS0A6NK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS81ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1477

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 932 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 873

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 872 ttctcaag 865
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>emb|BX823223.1|CNS0A6II Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS12ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 951 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 892

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 891 ttctcaag 884
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>gb|AY087840.1| Arabidopsis thaliana clone 38888 mRNA, complete sequence
          Length = 1496

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 966 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 907

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 906 ttctcaag 899
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>dbj|D31711.1|ATHCP29B Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp29,
           partial cds
          Length = 1051

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
           |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 836 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 777

                   
Query: 333 ttctcaag 340
           ||||||||
Sbjct: 776 ttctcaag 769
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>dbj|D31710.1|ATHCP29A Arabidopsis thaliana gene for chloroplast RNA-binding protein cp29,
            complete cds (exon1, exon2, exon3, exon4)
          Length = 4032

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
            |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 1947 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 1888

                    
Query: 333  ttctcaag 340
            ||||||||
Sbjct: 1887 ttctcaag 1880
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>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
          Length = 144628

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 273   ccgctgtcccggtcatagatgaccttagcatcaagcacctttccttgttcgctgaacagg 332
             |||||||||| ||| ||||| ||| |||| ||||  ||||||||||| ||| | |||| |
Sbjct: 60652 ccgctgtccctgtcgtagataaccctagcttcaactacctttccttgctcgttaaacaag 60711

                     
Query: 333   ttctcaag 340
             ||||||||
Sbjct: 60712 ttctcaag 60719
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>ref|XM_520688.1| PREDICTED: Pan troglodytes similar to solute carrier family 2, member
            9 protein isoform 1; human glucose transporter-like
            protein-9 (LOC465225), mRNA
          Length = 2600

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 400  aagctgccgccaccaccaccgc 421
            ||||||||||||||||||||||
Sbjct: 2387 aagctgccgccaccaccaccgc 2408
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>gb|DQ062785.1| Drosophila simulans heterogeneous nuclear ribonucleoprotein
           (Hrb27-C) mRNA, partial cds
          Length = 1263

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 163 aggtaacgaagccaaagccgcgcgacctgccgct 130
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>gb|DQ062784.1| Drosophila melanogaster heterogeneous nuclear ribonucleoprotein
           (Hrb27-C) mRNA, partial cds
          Length = 1263

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 163 aggtaacgaagccaaagccgcgcgacctgccgct 130
to top
>emb|X62639.1|DMHRP481 D.melanogaster mRNA for hrp48.1
          Length = 1708

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 249 aggtaacgaagccaaagccgcgcgacctgccgct 216
to top
>gb|AY128430.1| Drosophila melanogaster GH26816 full insert cDNA
          Length = 3199

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 720 aggtaacgaagccaaagccgcgcgacctgccgct 687
to top
>ref|NM_164721.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at
           27C CG10377-RC, transcript variant C (Hrb27C), mRNA
          Length = 2306

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 536 aggtaacgaagccaaagccgcgcgacctgccgct 503
to top
>ref|NM_164720.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at
           27C CG10377-RB, transcript variant B (Hrb27C), mRNA
          Length = 2284

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 514 aggtaacgaagccaaagccgcgcgacctgccgct 481
to top
>ref|NM_057521.3| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at
           27C CG10377-RA, transcript variant A (Hrb27C), mRNA
          Length = 2303

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 533 aggtaacgaagccaaagccgcgcgacctgccgct 500
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>gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, complete sequence
          Length = 165221

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 400   aagctgccgccaccaccaccgc 421
             ||||||||||||||||||||||
Sbjct: 59923 aagctgccgccaccaccaccgc 59902
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>dbj|AK152002.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830044O09 product:weakly
           similar to BA138E2.1.1 (Formin-binding protein 17
           (FBP17, FLJ13619, FLJ10754, FLJ10113, KIAA0554))
           (Fragment) [Homo sapiens], full insert sequence
          Length = 439

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 399 aaagctgccgccaccaccaccg 420
           ||||||||||||||||||||||
Sbjct: 31  aaagctgccgccaccaccaccg 10
to top
>dbj|AK151930.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830043G24 product:weakly
           similar to BA138E2.1.1 (Formin-binding protein 17
           (FBP17, FLJ13619, FLJ10754, FLJ10113, KIAA0554))
           (Fragment) [Homo sapiens], full insert sequence
          Length = 439

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 399 aaagctgccgccaccaccaccg 420
           ||||||||||||||||||||||
Sbjct: 31  aaagctgccgccaccaccaccg 10
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>gb|AY069699.1| Drosophila melanogaster LD46853 full length cDNA
          Length = 2181

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 244 aggtgacgaagccaaagcccctcgacctgccgct 277
           |||| |||||||||||||| | ||||||||||||
Sbjct: 454 aggtaacgaagccaaagccgcgcgacctgccgct 421
to top
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone
             BACR20B21, complete sequence
          Length = 166512

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 244   aggtgacgaagccaaagcccctcgacctgccgct 277
             |||| |||||||||||||| | ||||||||||||
Sbjct: 48756 aggtaacgaagccaaagccgcgcgacctgccgct 48789
to top
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
             BACR13J07, complete sequence
          Length = 174287

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 244   aggtgacgaagccaaagcccctcgacctgccgct 277
             |||| |||||||||||||| | ||||||||||||
Sbjct: 30930 aggtaacgaagccaaagccgcgcgacctgccgct 30897
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 395      aatcaaagctgccgccaccacc 416
                ||||||||||||||||||||||
Sbjct: 24817222 aatcaaagctgccgccaccacc 24817201



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 401     agctgccgccaccaccaccgc 421
               |||||||||||||||||||||
Sbjct: 4178963 agctgccgccaccaccaccgc 4178943
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>gb|AC084239.1|AC084239 Homo sapiens chromosome 19, BAC CTC-512J12 (BC347040), complete sequence
          Length = 176928

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     attacttcccagtctctctcat 42
              ||||||||||||||||||||||
Sbjct: 170417 attacttcccagtctctctcat 170396
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>gb|AC138473.1| Homo sapiens chromosome 19 clone CTC-512J12, complete sequence
          Length = 176918

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     attacttcccagtctctctcat 42
              ||||||||||||||||||||||
Sbjct: 170408 attacttcccagtctctctcat 170387
to top
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0501G01
          Length = 154561

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 395   aatcaaagctgccgccaccacc 416
             ||||||||||||||||||||||
Sbjct: 40342 aatcaaagctgccgccaccacc 40321
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>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete
              sequence
          Length = 270751

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 244    aggtgacgaagccaaagcccctcgacctgccgct 277
              |||| |||||||||||||| | ||||||||||||
Sbjct: 167424 aggtaacgaagccaaagccgcgcgacctgccgct 167391
to top
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete
            sequence
          Length = 82849

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 244  aggtgacgaagccaaagcccctcgacctgccgct 277
            |||| |||||||||||||| | ||||||||||||
Sbjct: 6832 aggtaacgaagccaaagccgcgcgacctgccgct 6865
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>gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, complete sequence
          Length = 217366

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 399    aaagctgccgccaccaccaccg 420
              ||||||||||||||||||||||
Sbjct: 116672 aaagctgccgccaccaccaccg 116693
to top
>gb|AF025422.1|AF025422 Homo sapiens chromosome 19 cosmid F15386, genomic sequence, complete
            sequence
          Length = 38000

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 21   attacttcccagtctctctcat 42
            ||||||||||||||||||||||
Sbjct: 1981 attacttcccagtctctctcat 2002
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>gb|U21164.1|HSU21164 Human dopamine D5 receptor gene, 5' flanking and promoter region
          Length = 3682

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 400  aagctgccgccaccaccaccgc 421
            ||||||||||||||||||||||
Sbjct: 1670 aagctgccgccaccaccaccgc 1649
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>ref|XM_550392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2207

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  agctgccgccaccaccaccgc 421
            |||||||||||||||||||||
Sbjct: 1451 agctgccgccaccaccaccgc 1471
to top
>ref|XM_955833.1| Neurospora crassa OR74A hypothetical protein (NCU01369.1) partial
           mRNA
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 400 aagctgccgccaccaccaccg 420
           |||||||||||||||||||||
Sbjct: 389 aagctgccgccaccaccaccg 369
to top
>ref|XM_326861.1| Neurospora crassa OR74A hypothetical protein (NCU01369.1) partial
           mRNA
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 400 aagctgccgccaccaccaccg 420
           |||||||||||||||||||||
Sbjct: 389 aagctgccgccaccaccaccg 369
to top
>gb|AC146594.3| Mus musculus BAC clone RP24-155O13 from chromosome 14, complete
             sequence
          Length = 172361

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 301   catcaagcacctttccttgtt 321
             |||||||||||||||||||||
Sbjct: 30846 catcaagcacctttccttgtt 30826
to top
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11
          Length = 79133

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   aagctgccgccaccaccaccg 420
             |||||||||||||||||||||
Sbjct: 78677 aagctgccgccaccaccaccg 78697
to top
>emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosmid contig 15E6
          Length = 61843

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 400  aagctgccgccaccaccaccg 420
            |||||||||||||||||||||
Sbjct: 7871 aagctgccgccaccaccaccg 7891
to top
>gb|S51720.1| RNA recognition motif-type RNA-binding protein {RRM7 clone}
           [Drosophila melanogaster, mRNA Partial, 132 nt]
          Length = 132

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 249 acgaagccaaagcccctcgacctgccgct 277
           |||||||||||||| | ||||||||||||
Sbjct: 131 acgaagccaaagccgcgcgacctgccgct 103
to top
>gb|AC138775.3| Homo sapiens BAC clone RP11-1247B7 from chromosome 2, complete sequence
          Length = 210658

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     ttacttcccagtctctctcat 42
              |||||||||||||||||||||
Sbjct: 163081 ttacttcccagtctctctcat 163101



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     ttacttcccagtctctctcat 42
              |||||||||||||||||||||
Sbjct: 156916 ttacttcccagtctctctcat 156936
to top
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   agctgccgccaccaccaccgc 421
             |||||||||||||||||||||
Sbjct: 16930 agctgccgccaccaccaccgc 16910
to top
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406H10
          Length = 156419

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 401    agctgccgccaccaccaccgc 421
              |||||||||||||||||||||
Sbjct: 125934 agctgccgccaccaccaccgc 125914
to top
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full
            insert sequence
          Length = 2207

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  agctgccgccaccaccaccgc 421
            |||||||||||||||||||||
Sbjct: 1451 agctgccgccaccaccaccgc 1471
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>ref|NM_001003155.1| Canis familiaris parathyroid hormone receptor 1 (PTHR1), mRNA
          Length = 2177

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  gctgccgccaccaccaccgc 421
            ||||||||||||||||||||
Sbjct: 1838 gctgccgccaccaccaccgc 1857
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>gb|AY524035.1| Mimulus lewisii floricaula (FLO) mRNA, FLOA paralog, partial cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 gctgccgccaccaccaccgc 421
           ||||||||||||||||||||
Sbjct: 87  gctgccgccaccaccaccgc 106
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>gb|AC136091.2| Rattus norvegicus 18 BAC CH230-329A5 (Children's Hospital Oakland
              Research Institute Rat (BN/SsNHsd/MCW) BAC library)
              complete sequence
          Length = 189650

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gctgccgccaccaccaccgc 421
              ||||||||||||||||||||
Sbjct: 101559 gctgccgccaccaccaccgc 101578
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>ref|XM_753501.1| Ustilago maydis 521 hypothetical protein (UM02447.1) partial mRNA
          Length = 3414

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  gccaccaccaccgctcgccc 427
            ||||||||||||||||||||
Sbjct: 3152 gccaccaccaccgctcgccc 3171
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>gb|AC123832.4| Mus musculus BAC clone RP24-126O19 from chromosome 9, complete sequence
          Length = 181337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    gctgccgccaccaccaccgc 421
              ||||||||||||||||||||
Sbjct: 161784 gctgccgccaccaccaccgc 161765
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>emb|AL161788.13| Human DNA sequence from clone RP11-421B23 on chromosome 9 Contains a
              novel pseudogene and a pseudogene similar to part of
              ribosomal protein S3A (RPS3A), complete sequence
          Length = 170460

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     gaaaatagtagtagaaacta 71
              ||||||||||||||||||||
Sbjct: 134178 gaaaatagtagtagaaacta 134197
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gctgccgccaccaccaccgc 421
              ||||||||||||||||||||
Sbjct: 779532 gctgccgccaccaccaccgc 779551
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>ref|NM_144354.2| Drosophila melanogaster SF2 CG6987-RA (SF2), mRNA
          Length = 1388

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 gctgccgccaccaccaccgc 421
           ||||||||||||||||||||
Sbjct: 699 gctgccgccaccaccaccgc 680
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>gb|AY051919.1| Drosophila melanogaster LD40489 full length cDNA
          Length = 1395

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 gctgccgccaccaccaccgc 421
           ||||||||||||||||||||
Sbjct: 687 gctgccgccaccaccaccgc 668
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 402      gctgccgccaccaccaccgc 421
                ||||||||||||||||||||
Sbjct: 19143439 gctgccgccaccaccaccgc 19143420
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>gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, region 89B-89C, BAC clone
              BACR05P04, complete sequence
          Length = 194335

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gctgccgccaccaccaccgc 421
              ||||||||||||||||||||
Sbjct: 135414 gctgccgccaccaccaccgc 135433
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>gb|AF234157.1|AF234157 Drosophila melanogaster SR family splicing factor (p28/SF2) gene,
            complete cds
          Length = 2817

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  gctgccgccaccaccaccgc 421
            ||||||||||||||||||||
Sbjct: 1543 gctgccgccaccaccaccgc 1524
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>gb|AF232773.1|AF232773 Drosophila melanogaster SR family splicing factor SF2 (SF2) mRNA,
           complete cds
          Length = 1391

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 gctgccgccaccaccaccgc 421
           ||||||||||||||||||||
Sbjct: 687 gctgccgccaccaccaccgc 668
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>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone
           BACR01H23, complete sequence
          Length = 199653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 gctgccgccaccaccaccgc 421
           ||||||||||||||||||||
Sbjct: 555 gctgccgccaccaccaccgc 574
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>gb|AC144940.5| Mus musculus BAC clone RP23-429A10 from chromosome 9, complete sequence
          Length = 213669

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   gctgccgccaccaccaccgc 421
             ||||||||||||||||||||
Sbjct: 40268 gctgccgccaccaccaccgc 40249
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gtcaaggtccactccgtcga 204
               ||||||||||||||||||||
Sbjct: 1577044 gtcaaggtccactccgtcga 1577063
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>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0086F04
          Length = 163579

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   gctgccgccaccaccaccgc 421
             ||||||||||||||||||||
Sbjct: 65804 gctgccgccaccaccaccgc 65785
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>ref|XM_321004.2| Anopheles gambiae str. PEST ENSANGP00000019861 (ENSANGG00000017372),
            mRNA
          Length = 2236

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  gctgccgccaccaccaccgc 421
            ||||||||||||||||||||
Sbjct: 1771 gctgccgccaccaccaccgc 1790
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>gb|AF167095.1|AF167095 Canis familiaris parathyroid hormone receptor-1 (PTH1) mRNA, complete
            cds
          Length = 2177

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  gctgccgccaccaccaccgc 421
            ||||||||||||||||||||
Sbjct: 1838 gctgccgccaccaccaccgc 1857
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>gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50 of 118 of the complete
              sequence
          Length = 226200

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gctgccgccaccaccaccgc 421
              ||||||||||||||||||||
Sbjct: 224863 gctgccgccaccaccaccgc 224882
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 402     gctgccgccaccaccaccgc 421
               ||||||||||||||||||||
Sbjct: 1412364 gctgccgccaccaccaccgc 1412383
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>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete
             sequence
          Length = 213187

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 402   gctgccgccaccaccaccgctcgc 425
             |||||||||||| |||||||||||
Sbjct: 79572 gctgccgccaccgccaccgctcgc 79595
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>dbj|D88440.1| Gallus gallus mRNA for high molecular mass nuclear antigen, partial
            cds
          Length = 3452

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 398  caaagctgccgccaccaccaccgc 421
            |||||||||| |||||||||||||
Sbjct: 1401 caaagctgccaccaccaccaccgc 1424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,013,374
Number of Sequences: 3902068
Number of extensions: 3013374
Number of successful extensions: 64526
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63967
Number of HSP's gapped (non-prelim): 555
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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