| Clone Name | rbags28p15 |
|---|---|
| Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 127 bits (320), Expect = 1e-29 Identities = 66/104 (63%), Positives = 73/104 (70%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFASGVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDP Sbjct: 215 EKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDP 274 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 SKFAV SDG++G SLFD Sbjct: 275 SKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 127 bits (318), Expect = 2e-29 Identities = 68/105 (64%), Positives = 73/105 (69%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFA+GVSMVASLSLAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYLKDP Sbjct: 215 EKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDP 274 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 151 SKFAV SD EMGFSLFDD Sbjct: 275 SKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 120 bits (301), Expect = 2e-27 Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+ ADK+KEYLKDPS Sbjct: 217 KFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPS 276 Query: 282 KFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 KFAV SD +MGFSLFD Sbjct: 277 KFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 109 bits (273), Expect = 3e-24 Identities = 57/103 (55%), Positives = 69/103 (66%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+ A+ +KE+LKDP Sbjct: 216 EKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDP 275 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLF 157 +KFAV SDG+MGF LF Sbjct: 276 TKFAV--AVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 107 bits (267), Expect = 2e-23 Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 3/108 (2%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++ A+K+KE+LKDP Sbjct: 215 EKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDP 274 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 151 SKF V SD E GF LFD+ Sbjct: 275 SKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 107 bits (267), Expect = 2e-23 Identities = 52/105 (49%), Positives = 66/105 (62%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++ A+K+KEYLKDP Sbjct: 215 EKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDP 274 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 151 SKFAV D F LFD+ Sbjct: 275 SKFAVASVAAVSADAGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 86.3 bits (212), Expect = 4e-17 Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 2/107 (1%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KFA GVS + P +AAPH+F+NAYKNVLAVA+ T+YS+ AD++KEYLKDP Sbjct: 216 EKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDP 275 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XXXSDGEMGFSLFDD 151 SKFA SD EMGF LFD+ Sbjct: 276 SKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 84.3 bits (207), Expect = 1e-16 Identities = 42/103 (40%), Positives = 55/103 (53%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV +AS+ L I YPT+A+ PH +N YK VLAV +ETDY++ A+K+K YL DP+ Sbjct: 217 RFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPT 276 Query: 282 KFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 FAV SD +MGF LFD Sbjct: 277 AFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 82.0 bits (201), Expect = 7e-16 Identities = 42/103 (40%), Positives = 54/103 (52%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV VAS+ L I YPT+A+ PH +N YK VLAVA+ETDY++ A+K+K +L DPS Sbjct: 214 RFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPS 273 Query: 282 KFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 F SD +MGF LFD Sbjct: 274 AFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 81.3 bits (199), Expect = 1e-15 Identities = 43/103 (41%), Positives = 55/103 (53%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV +AS+ L I YPT+A+ PH +N YK VLA+A+ETDYS+ ADK+K +L DPS Sbjct: 214 RFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLADPS 273 Query: 282 KFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 F V SD +MGF LFD Sbjct: 274 AFVV-AAPVAETAAAPAASAAPAKEEKEESEESDDDMGFGLFD 315
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 79.7 bits (195), Expect = 3e-15 Identities = 36/64 (56%), Positives = 47/64 (73%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV +AS+ L I YPT+A+ PH +N YK VL VA+ETDYS+ ADK+K +L DPS Sbjct: 214 RFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLADPS 273 Query: 282 KFAV 271 +FAV Sbjct: 274 RFAV 277
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 79.3 bits (194), Expect = 4e-15 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L DPS Sbjct: 214 RFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273 Query: 282 KFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 FA SD +MGF LFD Sbjct: 274 AFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 78.6 bits (192), Expect = 8e-15 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L DPS Sbjct: 214 RFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273 Query: 282 KF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 F A SD +MGF LFD Sbjct: 274 AFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 78.6 bits (192), Expect = 8e-15 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 KF +GV+ +A++SL I YPT+A+APH N +KN+LA+A T+ + A IKE++KDPS Sbjct: 214 KFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPS 273 Query: 282 KF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 KF A D +MGF LFD Sbjct: 274 KFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 78.2 bits (191), Expect = 1e-14 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 KF GV+ +A++ L++ YPT+A+APH N +KN+LA+A T+ + A IKEY+KDPS Sbjct: 214 KFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPS 273 Query: 282 KFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 KFA D +MGF LFD Sbjct: 274 KFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 77.4 bits (189), Expect = 2e-14 Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L DPS Sbjct: 205 RFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 264 Query: 282 KF--AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 F A SD +MGF LFD Sbjct: 265 AFVAAAPVAAAPAAAPAATTAAPAKVEAKEESEESDEDMGFGLFD 309
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 77.0 bits (188), Expect = 2e-14 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ET+Y++ +K+K +L DPS Sbjct: 214 RFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPS 273 Query: 282 KFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 FA SD +MGF LFD Sbjct: 274 AFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 72.0 bits (175), Expect = 7e-13 Identities = 40/103 (38%), Positives = 53/103 (51%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPS 283 +F SGV VAS+SLA++YPT+A+ H N +N+L VA TD S+ A+ IK ++ DPS Sbjct: 213 RFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPS 272 Query: 282 KFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 KFA SD +MGF LFD Sbjct: 273 KFA----AAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 311
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 65.5 bits (158), Expect = 7e-11 Identities = 34/102 (33%), Positives = 50/102 (49%) Frame = -1 Query: 459 FASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSK 280 F S VS +AS+SLAI YPT+ + H +N YK++LAVA+ Y Y + + + +++P K Sbjct: 213 FVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEK 272 Query: 279 FAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +A SD +MGF LFD Sbjct: 273 YA--AAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 65.5 bits (158), Expect = 7e-11 Identities = 33/100 (33%), Positives = 52/100 (52%) Frame = -1 Query: 453 SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFA 274 S S++ ++SL +YPT+ + H +NAYKN++AV+L T+Y+++ ++ K +L DPS F Sbjct: 215 SAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAFV 274 Query: 273 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 V SD +MGF LFD Sbjct: 275 V--AAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 65.1 bits (157), Expect = 9e-11 Identities = 33/104 (31%), Positives = 53/104 (50%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 + FA+G + VA++S A+ P+ AAAPH L A++N A+ L+T + + ++KE +++P Sbjct: 212 EAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENP 271 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 + FA DG+MGFSLFD Sbjct: 272 AAFA-AAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 63.9 bits (154), Expect = 2e-10 Identities = 32/104 (30%), Positives = 54/104 (51%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDP 286 +KF+ GVS VA+LS A T A+ PH+F+ A+KN++A+ +++DY++ +K+++++P Sbjct: 213 EKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENP 272 Query: 285 SKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 FA DG MGF +FD Sbjct: 273 EAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 63.9 bits (154), Expect = 2e-10 Identities = 26/54 (48%), Positives = 41/54 (75%) Frame = -1 Query: 465 DKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +KF G+ +A++SL I YPT+A+ PH +NA+KN+LA++ ET Y++D A+K K Sbjct: 209 NKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 60.8 bits (146), Expect = 2e-09 Identities = 25/62 (40%), Positives = 46/62 (74%) Frame = -1 Query: 459 FASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSK 280 F++ ++ +ASLSLA+++PT+ + H +NAYK VLAVA+ET+ S+ +++K+ + +P Sbjct: 213 FSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEA 272 Query: 279 FA 274 +A Sbjct: 273 YA 274
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 58.9 bits (141), Expect = 6e-09 Identities = 23/62 (37%), Positives = 46/62 (74%) Frame = -1 Query: 459 FASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSK 280 F+S ++ +A++SLA+++PT+ + H +N+YK VLAVA+ET+ S+ +++K+ + +P Sbjct: 213 FSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEA 272 Query: 279 FA 274 +A Sbjct: 273 YA 274
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -1 Query: 462 KFASGVSMVASLSLAISYPTMAAAPH 385 +FA+GVSMV SLSLAISYPT+AAAPH Sbjct: 217 RFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/46 (43%), Positives = 30/46 (65%) Frame = -1 Query: 450 GVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 313 G+S VA+LSL PT A PHM ++A+K +L ++ T+Y +D D Sbjct: 225 GISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 37.7 bits (86), Expect = 0.015 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = -1 Query: 450 GVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 322 G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 224 GLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 37.7 bits (86), Expect = 0.015 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = -1 Query: 450 GVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 322 G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 225 GLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 315 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 398 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587
>Y421_METJA (Q57864) Hypothetical protein MJ0421| Length = 360 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%) Frame = -1 Query: 366 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 271 + VL V ET+ +D A+KIK+Y+K+ FAV Sbjct: 58 ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,469,791 Number of Sequences: 219361 Number of extensions: 856625 Number of successful extensions: 2501 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2494 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)