>gb|AC099549.5| Homo sapiens BAC clone RP11-484D7 from 4, complete sequence
          Length = 30756

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 610   acatatgactgaaacaaacaaa 631
             ||||||||||||||||||||||
Sbjct: 22904 acatatgactgaaacaaacaaa 22883

>gb|AC015771.7| Homo sapiens, clone RP11-2F20, complete sequence
          Length = 161034

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 621    aaacaaacaaaatccaagcagg 642
              ||||||||||||||||||||||
Sbjct: 148010 aaacaaacaaaatccaagcagg 147989

>emb|AL445201.14| Human DNA sequence from clone RP11-358L16 on chromosome 10 Contains a
             AFR GTPase-activating protein (MRIP2) pseudogene, a novel
             gene, gene LOC93550, the 3' end of a KIAA0592 pseudogene
             and three CpG islands, complete sequence
          Length = 179193

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 624   caaacaaaatccaagcaggtt 644
             |||||||||||||||||||||
Sbjct: 76602 caaacaaaatccaagcaggtt 76622

>gb|AC093886.2| Homo sapiens BAC clone RP11-666L21 from 4, complete sequence
          Length = 174332

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 625    aaacaaaatccaagcaggtttcatc 649
              |||| ||||||||||||||||||||
Sbjct: 158589 aaactaaatccaagcaggtttcatc 158613

>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 497    ctgacttcagatttgcaatct 517
              |||||||||||||||||||||
Sbjct: 622770 ctgacttcagatttgcaatct 622790

>gb|AC013416.4|AC013416 Homo sapiens BAC clone CTD-2522F11 from 7, complete sequence
          Length = 117927

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 675   cttgcttggtgaccttgaatg 695
             |||||||||||||||||||||
Sbjct: 72540 cttgcttggtgaccttgaatg 72560

>ref|NM_210209.1| Eremothecium gossypii AEL006Wp (AEL006W), mRNA
          Length = 7476

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 497  ctgacttcagatttgcaatct 517
            |||||||||||||||||||||
Sbjct: 1387 ctgacttcagatttgcaatct 1407

>gb|AC169510.1| Mus musculus BAC clone RP23-121E6 from chromosome 14, complete sequence
          Length = 214403

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tgcaaattgcaaccatgtat 41
             ||||||||||||||||||||
Sbjct: 40160 tgcaaattgcaaccatgtat 40179

>gb|BC070815.1| Xenopus laevis hypothetical protein MGC83892, mRNA (cDNA clone
            MGC:83892 IMAGE:6859020), complete cds
          Length = 1955

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 621  aaacaaacaaaatccaagca 640
            ||||||||||||||||||||
Sbjct: 1369 aaacaaacaaaatccaagca 1388

>gb|AY277952.1| Takifugu rubripes transcription factor Sox2 (Sox2) gene, complete cds
          Length = 1896

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 627  acaaaatccaagcaggtttc 646
            ||||||||||||||||||||
Sbjct: 1494 acaaaatccaagcaggtttc 1513

>emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 in linkage group 20,
              complete sequence
          Length = 175626

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    atgggagtgttggaccatca 218
              ||||||||||||||||||||
Sbjct: 109636 atgggagtgttggaccatca 109617

>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    gccatagcaaggaaaaagga 424
              ||||||||||||||||||||
Sbjct: 135149 gccatagcaaggaaaaagga 135168

>emb|X58395.1|HMRIBOS H.marismortui genes HmaL5, HmaS14, HmaS8, HmaL6, HL5, HL24, HmaL18,
            HmaS5, HmaL30, and HmaL15 for ribosomal proteins
          Length = 4709

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  gaggccagaaccgattacca 137
            ||||||||||||||||||||
Sbjct: 2883 gaggccagaaccgattacca 2902

>emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chromosome 6, complete
             sequence
          Length = 67605

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 614   atgactgaaacaaacaaaatccaa 637
             |||| |||||||||||||||||||
Sbjct: 15106 atgaatgaaacaaacaaaatccaa 15129

>emb|AL138969.16| Human DNA sequence from clone RP1-110C15 on chromosome X, complete
             sequence
          Length = 144658

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   catagcaaggaaaaaggaaa 426
             ||||||||||||||||||||
Sbjct: 35297 catagcaaggaaaaaggaaa 35316

>gb|AC090804.8| Homo sapiens chromosome 11, clone RP11-258P13, complete sequence
          Length = 45348

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   aaacaaacaaaatccaagca 640
             ||||||||||||||||||||
Sbjct: 25784 aaacaaacaaaatccaagca 25803

>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7, complete
              sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    aatgataaccatactcctct 498
              ||||||||||||||||||||
Sbjct: 101649 aatgataaccatactcctct 101630

>gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, complete sequence
          Length = 207682

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 617    actgaaacaaacaaaatccaagca 640
              ||||||||| ||||||||||||||
Sbjct: 123386 actgaaacacacaaaatccaagca 123363

>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
             complete sequence
          Length = 181165

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   tgataaccatactcctctgacttc 504
             ||||||| ||||||||||||||||
Sbjct: 73558 tgataactatactcctctgacttc 73535

>gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, complete sequence
          Length = 109659

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   aaacaaacaaaatccaagca 640
             ||||||||||||||||||||
Sbjct: 86719 aaacaaacaaaatccaagca 86738

>dbj|AK172588.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830216N22 product:dedicator of
           cytokinesis 10, full insert sequence
          Length = 2790

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gccatagcaaggaaaaagga 424
           ||||||||||||||||||||
Sbjct: 318 gccatagcaaggaaaaagga 299

>dbj|AK046108.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230342H03
           product:unclassifiable, full insert sequence
          Length = 2524

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 676 ttgcttggtgaccttgaatg 695
           ||||||||||||||||||||
Sbjct: 976 ttgcttggtgaccttgaatg 995

>gb|AC108479.5| Homo sapiens BAC clone RP11-1378G18 from 2, complete sequence
          Length = 184433

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   catagcaaggaaaaaggaaa 426
             ||||||||||||||||||||
Sbjct: 17648 catagcaaggaaaaaggaaa 17629

>gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, complete sequence
          Length = 79459

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   aaaatgataaccatactcct 496
             ||||||||||||||||||||
Sbjct: 75864 aaaatgataaccatactcct 75845

>gb|AC154182.2| Mus musculus BAC clone RP23-471C19 from chromosome 16, complete
             sequence
          Length = 180782

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   tagcaaggaaaaaggaaaga 428
             ||||||||||||||||||||
Sbjct: 92266 tagcaaggaaaaaggaaaga 92247

>gb|AF294032.1|AF294032 Homo sapiens UBE1L protein (UBE1L) gene, complete cds
          Length = 12979

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 553  cagaggcatgaacttctgga 572
            ||||||||||||||||||||
Sbjct: 7190 cagaggcatgaacttctgga 7171

>gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 190961

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    agaaaaacagggaacacctg 114
             ||||||||||||||||||||
Sbjct: 57213 agaaaaacagggaacacctg 57232

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     gaggccagaaccgattacca 137
               ||||||||||||||||||||
Sbjct: 1432997 gaggccagaaccgattacca 1432978

>gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 154685

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    agaaaaacagggaacacctg 114
             ||||||||||||||||||||
Sbjct: 13465 agaaaaacagggaacacctg 13446

>emb|CT737308.2| Pan troglodytes chromosome X clone CH251-63C08 map Xq28, complete
             sequence
          Length = 166183

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   catagcaaggaaaaaggaaa 426
             ||||||||||||||||||||
Sbjct: 97986 catagcaaggaaaaaggaaa 98005

>gb|AC154730.3| Mus musculus BAC clone RP23-120M21 from chromosome 14, complete
             sequence
          Length = 217242

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tgcaaattgcaaccatgtat 41
             ||||||||||||||||||||
Sbjct: 79407 tgcaaattgcaaccatgtat 79388

>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the
             3' end of a novel gene, the gene for a novel protein
             similar to nascent polypeptide-associated complex alpha
             polypeptide Naca, the Tbrg4 gene for transforming growth
             factor beta regulated gene 4, the Wap gene for whey acidic
             protein, an ethanol induced 6 (Etohi6) pseudogene, two
             novel genes, the Ramp3 gene for receptor (calcitonin)
             activity modifying protein 3, a lactate dehydrogenase 1 A
             chain (Ldh1) pseudogene, a mitochondrial ribosomal protein
             L36 (Mrpl36) pseudogene, a retinoblastoma binding protein
             5 (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a)
             pseudogene and two CpG islands, complete sequence
          Length = 225879

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 676   ttgcttggtgaccttgaatg 695
             ||||||||||||||||||||
Sbjct: 18032 ttgcttggtgaccttgaatg 18013

>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence
          Length = 175586

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    tgataaccatactcctctgacttc 504
              ||||||| ||||||||||||||||
Sbjct: 105429 tgataactatactcctctgacttc 105406

>emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, complete sequence
          Length = 156634

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 82     tagagcagtcatcagaaaaacagggaac 109
              ||||||||| |||| |||||||||||||
Sbjct: 140349 tagagcagtaatcacaaaaacagggaac 140322

>gb|L13852.1|HUME1URP Homo sapiens ubiquitin-activating enzyme E1 related protein mRNA,
            complete cds
          Length = 3301

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 553  cagaggcatgaacttctgga 572
            ||||||||||||||||||||
Sbjct: 1310 cagaggcatgaacttctgga 1291

>emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chromosome 11, complete
             sequence
          Length = 201123

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gcagtcatcagaaaaacagg 105
             ||||||||||||||||||||
Sbjct: 23930 gcagtcatcagaaaaacagg 23949

>dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1987G5
          Length = 189987

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 617    actgaaacaaacaaaatccaagca 640
              ||||||||| ||||||||||||||
Sbjct: 162535 actgaaacacacaaaatccaagca 162512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,976,014
Number of Sequences: 3902068
Number of extensions: 7976014
Number of successful extensions: 143911
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143820
Number of HSP's gapped (non-prelim): 91
length of query: 724
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 701
effective length of database: 17,143,297,704
effective search space: 12017451690504
effective search space used: 12017451690504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)