ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28p07 |
|---|---|
| Clone Library Name | barley_pub |
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 206 bits (525), Expect = 3e-53 Identities = 100/119 (84%), Positives = 110/119 (92%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 T VHFRVYKS+QKYM+L+CSDLRRSSLRPGLYTPAYGGFFE+DLEKE+KISLRTLIDRSA Sbjct: 473 TTVHFRVYKSEQKYMVLLCSDLRRSSLRPGLYTPAYGGFFEYDLEKEKKISLRTLIDRSA 532 Query: 399 VESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVNVMKG 223 VESFG GGR CI ARVYP A+V DGATHMYAFNNGS+TV+V QL+AWSM +AQVNV KG Sbjct: 533 VESFGGGGRACIMARVYPAAVV-DGATHMYAFNNGSSTVKVSQLKAWSMTRAQVNVRKG 590
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 140 bits (353), Expect = 3e-33 Identities = 68/119 (57%), Positives = 85/119 (71%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 TAV FRV++ KY +LMC+DL +SS R G+Y PAYGGF + D++ + ISLRTLID S Sbjct: 460 TAVFFRVFRHHDKYKLLMCTDLTKSSTRAGVYKPAYGGFVDMDIDDHKTISLRTLIDHSV 519 Query: 399 VESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVNVMKG 223 VESFG GGR CITARVYP V ++H+Y FNNGS V+V +L AW + A VNV+ G Sbjct: 520 VESFGGGGRACITARVYP-EHVATSSSHLYVFNNGSDAVKVAKLEAWDLATATVNVVVG 577
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 135 bits (340), Expect = 9e-32 Identities = 66/120 (55%), Positives = 84/120 (70%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 TAV FRV++ Y +LMC+DL RS+ R G+Y P++GGF + D+EK+R ISLRTLID S Sbjct: 464 TAVFFRVFRLSHGYTVLMCTDLTRSTSRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSI 523 Query: 399 VESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVNVMKGG 220 VESFG GGR C+TARVYP V G++H+Y FNN S V+V +L AW + A VN G Sbjct: 524 VESFGGGGRTCMTARVYP-EHVATGSSHLYVFNNASDAVKVSKLEAWELATASVNAGDDG 582
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 132 bits (331), Expect = 9e-31 Identities = 64/115 (55%), Positives = 79/115 (68%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 TAV FRV+K KY + MC+DL RSS + +Y AYGGF + D++K++ ISLRTLID S Sbjct: 402 TAVFFRVFKHHGKYKVFMCTDLTRSSTKADVYKDAYGGFVDVDIQKDKSISLRTLIDHSM 461 Query: 399 VESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVN 235 +ESFG GGR CIT RVYP ++H+Y FNNGS TV V +L AW M A VN Sbjct: 462 IESFGGGGRACITTRVYPEHAA-TSSSHLYVFNNGSGTVNVSKLEAWEMATATVN 515
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 130 bits (327), Expect = 3e-30 Identities = 63/111 (56%), Positives = 81/111 (72%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 T V FRV+K+Q + +LMCSD RSSL+ GLY P++ GF + DL ++KISLR+LID S Sbjct: 478 TPVFFRVFKAQNTHKVLMCSDATRSSLKEGLYRPSFAGFVDVDLATDKKISLRSLIDNSV 537 Query: 399 VESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKK 247 VESFG+ G+ CI++RVYP V + A H+Y FNNGS T+ V L AWSMKK Sbjct: 538 VESFGAKGKTCISSRVYPTLAVYENA-HLYVFNNGSETITVENLDAWSMKK 587
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 116 bits (291), Expect = 4e-26 Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Frame = -3 Query: 579 TAVHFRVYKSQ---QKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLID 409 TAV FRV+K K ++LMC+D +SSL P LY P + GF + D+ KISLR+LID Sbjct: 460 TAVFFRVFKPAGHGAKPVVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSG-KISLRSLID 518 Query: 408 RSAVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVN 235 RS VESFG+GG+ CI +RVYP + D A H+Y FNNG +++ L+AW MKK +N Sbjct: 519 RSVVESFGAGGKTCILSRVYPSMAIGDKA-HLYVFNNGEADIKISHLKAWEMKKPLMN 575
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 113 bits (282), Expect = 5e-25 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQK-YMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 TAV FRV+K+ +++LMC+D RSS +Y P + GF + D+ K ++I+LRTLID S Sbjct: 469 TAVFFRVFKANDSSHVVLMCNDPTRSSYESKIYRPTFAGFVDVDIAKNKQIALRTLIDHS 528 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVN 235 VESFG+ G+ CI RVYP V D A H++ FNNG + V+V L AW MK ++N Sbjct: 529 VVESFGARGKTCILTRVYPRKAVGDDA-HLFVFNNGESDVKVTNLDAWEMKTPKMN 583
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 111 bits (278), Expect = 1e-24 Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRP-GLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V FRV+K++ K +LMCSD +RSS GLY P + G+ + DL ++KISLR+LID S Sbjct: 476 TPVFFRVFKTKDKLKVLMCSDAKRSSTTAEGLYKPPFAGYVDVDLS-DKKISLRSLIDNS 534 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMK 250 VESFG+ GR CIT+RVYP + + A H++ FNNG+ + + L AWSMK Sbjct: 535 VVESFGAHGRTCITSRVYPKIAIYNNA-HVFVFNNGTEAITIDSLDAWSMK 584
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 110 bits (275), Expect = 3e-24 Identities = 60/116 (51%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQ-KYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 TAV FRV++ K +LMC+D +SSL P LY P + GF + D+ KI+LR+LIDRS Sbjct: 475 TAVFFRVFRDGHGKPKVLMCTDPTKSSLSPDLYKPTFAGFVDADISSG-KITLRSLIDRS 533 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQVN 235 VESFG+GG+ CI +RVYP V A H+Y FNNG V V L AW MKK +N Sbjct: 534 VVESFGAGGKTCILSRVYPSIAVGKDA-HLYVFNNGEVDVTVSGLTAWEMKKPLMN 588
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 106 bits (264), Expect = 6e-23 Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 6/117 (5%) Frame = -3 Query: 579 TAVHFRVYKSQQ------KYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRT 418 TAV FRV++ K ++LMC+D +SS P +Y P + GF + D+ KISLR+ Sbjct: 477 TAVFFRVFRPAARGGGAGKPVVLMCTDPTKSSRNPNMYQPTFAGFVDTDITNG-KISLRS 535 Query: 417 LIDRSAVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKK 247 LIDRS VESFG+GG+ CI +RVYP + A +Y FNNG ++V QL AW MKK Sbjct: 536 LIDRSVVESFGAGGKACILSRVYPSLAIGKNA-RLYVFNNGKAEIKVSQLTAWEMKK 591
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 105 bits (262), Expect = 9e-23 Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Frame = -3 Query: 579 TAVHFRVYKSQ-QKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V FR++K++ QK +LMCSD +RSSL GLY P++ GF + DL ++KISLR+LID S Sbjct: 469 TPVFFRIFKAEDQKLKVLMCSDAKRSSLAEGLYKPSFRGFVDVDL-SDKKISLRSLIDNS 527 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSM 253 VESFG+ + I++RVYP + + A H++ FNNG+ + V L AWSM Sbjct: 528 VVESFGAQRKNLISSRVYPTLAIYNNA-HLFVFNNGTEPITVDNLDAWSM 576
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 87.4 bits (215), Expect = 3e-17 Identities = 47/86 (54%), Positives = 56/86 (65%) Frame = -3 Query: 579 TAVHFRVYKSQQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSA 400 TAV FR++K Q K ++LMCSD RSSL +YG F + D E K+SLRTLID S Sbjct: 463 TAVFFRIFKYQDKNLVLMCSDQSRSSLNKDNDMTSYGTFVDVDPLHE-KLSLRTLIDHSV 521 Query: 399 VESFGSGGRICITARVYPVALVDDGA 322 VESFG GR C+TARVYP + D A Sbjct: 522 VESFGGEGRACVTARVYPTLAIHDKA 547
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 75.5 bits (184), Expect = 1e-13 Identities = 49/113 (43%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = -3 Query: 579 TAVHFRVYKS-QQKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V+F V K K CSD RSSL ++ YG LE E K+SLR L+D S Sbjct: 519 TPVYFYVVKGINGKLHTSFCSDQSRSSLANDVHKQIYGSVVPV-LEGE-KLSLRILVDHS 576 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKA 244 VESF GGR CIT+RVYP + GA ++ FNN T L+ W M A Sbjct: 577 IVESFAQGGRTCITSRVYPTRAI-YGAARLFLFNNAIETNVTASLKVWQMNSA 628
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 70.9 bits (172), Expect = 3e-12 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Frame = -3 Query: 525 CSDLRRSSLRPGLYTPAYGGFFE-FDLEKERKISLRTLIDRSAVESFGSGGRICITARVY 349 C+D RSS PG+ YG D EK R +R L+D S VESF GGR IT+R+Y Sbjct: 540 CADQTRSSEAPGVAKQVYGSSVPVLDGEKHR---MRLLVDHSIVESFAQGGRTVITSRIY 596 Query: 348 PVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQV 238 P V +GA ++ FNN + + L+ WS++ A + Sbjct: 597 PTKAV-NGAARLFVFNNATGAIVTASLKIWSLESADI 632
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 69.3 bits (168), Expect = 8e-12 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQKYM-ILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V+F V K + + CSD RSS + +G + K K SLR L+D S Sbjct: 527 TPVYFYVIKGRNGNLRTSFCSDQSRSSQANDVRKQIFGSVVP--VLKGEKFSLRMLVDHS 584 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKA 244 VESF GGR C+T+RVYP + GA ++ FNN + L+ W M A Sbjct: 585 IVESFAQGGRTCVTSRVYPTKAI-YGAARLFLFNNATEATVTASLKVWQMNSA 636
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 68.6 bits (166), Expect = 1e-11 Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQKYM-ILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V+F V K + + CSD RSS + +G LE E K SLR L+D S Sbjct: 529 TPVYFYVIKGRNGNLKTSFCSDQSRSSQPNDVRKQIFGNIVPV-LEGE-KFSLRMLVDHS 586 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKA 244 VESF GGR C+T+RVYP + GA ++ FNN + L+ W M A Sbjct: 587 IVESFAQGGRTCVTSRVYPTKAI-YGAARLFLFNNATEATVTASLKIWQMNSA 638
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQ-KYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V+F + K + C+D RSS PG+ YG L+ E K S+R L+D S Sbjct: 517 TPVYFYISKGADGRAETHFCADQTRSSEAPGVGKQVYGSSVPV-LDGE-KHSMRLLVDHS 574 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKAQV 238 VESF GGR IT+R+YP V +GA ++ FNN + ++ WS++ A + Sbjct: 575 IVESFAQGGRTVITSRIYPTKAV-NGAARLFVFNNATGASVTASVKIWSLESANI 628
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 63.2 bits (152), Expect = 5e-10 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Frame = -3 Query: 579 TAVHFRVYKSQQ-KYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 TAV+F + K C D R+S L YG L+ E +S+R L+D S Sbjct: 548 TAVYFYLLKGTDGSLQTFFCQDELRASKANDLVKRVYGSLVPV-LDGEN-LSVRILVDHS 605 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGS-TTVRVPQLRAWSMKKAQV 238 VESF GGR CIT+RVYP + D A ++ FNN + V+ ++ W + A + Sbjct: 606 IVESFAQGGRTCITSRVYPTRAIYDSA-RVFLFNNATHAHVKAKSVKIWQLNSAYI 660
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 1/113 (0%) Frame = -3 Query: 579 TAVHFRVYKSQQ-KYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRS 403 T V+F + K C+D RSS + YG + + +S+R L+D S Sbjct: 542 TPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGS--DVPVLHGESLSMRLLVDHS 599 Query: 402 AVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWSMKKA 244 VESF GGR IT+RVYP + A ++ FNN + ++AW M A Sbjct: 600 IVESFAQGGRTVITSRVYPTRAI-YSAARVFLFNNATGVSVTASVKAWQMASA 651
>SACC_BACSU (P05656) Levanase precursor (EC 3.2.1.65) (2,6-beta-D-fructan| fructanohydrolase) Length = 677 Score = 35.4 bits (80), Expect = 0.12 Identities = 23/63 (36%), Positives = 32/63 (50%) Frame = -3 Query: 435 KISLRTLIDRSAVESFGSGGRICITARVYPVALVDDGATHMYAFNNGSTTVRVPQLRAWS 256 K+ LR +DRS+VE FG+ G+ IT + P +YA N G V+V L Sbjct: 454 KVKLRIFVDRSSVEVFGNDGKQVITDIILPDR--SSKGLELYAANGG---VKVKSLTIHP 508 Query: 255 MKK 247 +KK Sbjct: 509 LKK 511
>RAFD_ECOLI (P16553) Raffinose invertase (EC 3.2.1.26) (Invertase)| Length = 476 Score = 35.4 bits (80), Expect = 0.12 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -3 Query: 486 YTPAYG--GFFEFDLEKERKISLRTLIDRSAVESFGSGGRICITARVYPVALVDDGATHM 313 Y P G G+ +L ++LR +DRS+VE F + G +++R+YP A D + Sbjct: 401 YYPEEGLDGYRSVELPDTEYLTLRIFLDRSSVEVFVNDGEATLSSRIYPQA--DSRQLSL 458 Query: 312 YA 307 YA Sbjct: 459 YA 460
>INU2_ASPFI (O94220) Inulinase precursor (EC 3.2.1.7)| (2,1-beta-D-fructanfructanohydrolase) (Inulase) Length = 516 Score = 34.7 bits (78), Expect = 0.21 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -3 Query: 486 YTPAYGGFFEFDLEKERK--ISLRTLIDRSAVESFGSGGRICITARVYP 346 Y PA GG LE++ +S+R L+D +VE FG G I+ ++P Sbjct: 439 YDPAAGGVHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFP 487
>CSPG3_PANTR (Q5IS41) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1321 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Frame = -2 Query: 349 SGGTCR*RRHPHVCFQQWKYHGQSAATKGMEHEKSTSECDEGW-----KCDRCLAQK--- 194 +GGTC + VC Y G EK T CD GW C R A + Sbjct: 1057 NGGTCIDEVNGFVCLCLPSYGGSFC-------EKDTEGCDRGWHKFQGHCYRYFAHRRAW 1109 Query: 193 SNSSQSCD*KTGH-ALVHFNIYHVYLN 116 ++ + C ++GH VH + H ++N Sbjct: 1110 EDAERDCRRRSGHLTSVHSSEEHSFIN 1136
>ACSA_PENCH (P36333) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 669 Score = 31.6 bits (70), Expect = 1.7 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 1/95 (1%) Frame = +3 Query: 21 HKLILFTPNLCEFKSLVATSTSLTYQLPLLQKFKYTW*ILK*TSAWPVFQSHD*LELLFC 200 H +++ P L ++V ST P F W ++ + + L LL Sbjct: 331 HTYVVYAPLLLGCATVVFEST------PAYPNFSRYWDVIDKHDVTQFYVAPTALRLLKR 384 Query: 201 AKHRSHFHPSSHSL-VLFSCSMPLVAAL*PWYFHC 302 A H H HSL +L S P+ A + WYF C Sbjct: 385 AGDE-HIHHKMHSLRILGSVGEPIAAEVWKWYFEC 418
>CSPG3_HUMAN (O14594) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1321 Score = 30.8 bits (68), Expect = 3.0 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 9/87 (10%) Frame = -2 Query: 349 SGGTCR*RRHPHVCFQQWKYHGQSAATKGMEHEKSTSECDEGW-----KCDRCLAQK--- 194 +GGTC + VC Y G EK T CD GW C R A + Sbjct: 1057 NGGTCIDEVNGFVCLCLPSYGGSFC-------EKDTEGCDRGWHKFQGHCYRYFAHRRAW 1109 Query: 193 SNSSQSCD*KTGH-ALVHFNIYHVYLN 116 ++ + C ++GH VH H ++N Sbjct: 1110 EDAEKDCRRRSGHLTSVHSPEEHSFIN 1136
>CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) (245 kDa early postnatal core glycoprotein) [Contains: 150 kDa adult core glycoprotein] Length = 1257 Score = 30.4 bits (67), Expect = 3.9 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 10/95 (10%) Frame = -2 Query: 349 SGGTCR*RRHPHVCFQQWKYHGQSAATKGMEHEKSTSECDEGW-----KCDRCLAQK--- 194 +GGTC + +C Y G EK T CD GW C R A + Sbjct: 998 NGGTCIDEVNGFICLCLPSYGGNLC-------EKDTEGCDRGWHKFQGHCYRYFAHRRAW 1050 Query: 193 SNSSQSCD*KTGH-ALVHFNIYHVYLN-F*SSGNW 95 ++ + C + GH VH H ++N F +W Sbjct: 1051 EDAERDCRRRAGHLTSVHSPEEHKFINSFGHENSW 1085
>CSPG3_MOUSE (P55066) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1268 Score = 30.4 bits (67), Expect = 3.9 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 10/95 (10%) Frame = -2 Query: 349 SGGTCR*RRHPHVCFQQWKYHGQSAATKGMEHEKSTSECDEGW-----KCDRCLAQK--- 194 +GGTC + +C Y G EK T CD GW C R A + Sbjct: 1009 NGGTCIDEVNGFICLCLPSYGGSLC-------EKDTEGCDRGWHKFQGHCYRYFAHRRAW 1061 Query: 193 SNSSQSCD*KTGH-ALVHFNIYHVYLN-F*SSGNW 95 ++ + C + GH VH H ++N F +W Sbjct: 1062 EDAERDCRRRAGHLTSVHSPEEHKFINSFGHENSW 1096
>CLCN4_HUMAN (P51793) Chloride channel protein 4 (ClC-4)| Length = 760 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -2 Query: 577 CSALQGLQITAKVHDPHVLRPKKVFPETRT---VHTSLWRL 464 C AL+ Q+ ++DP++ RP P+ V+T++W+L Sbjct: 405 CGALESSQLCDYINDPNMTRPVDDIPDRPAGVGVYTAMWQL 445
>Y1309_MYCBO (P64796) Hypothetical protein Mb1309| Length = 875 Score = 29.6 bits (65), Expect = 6.6 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -3 Query: 480 PAYGGFFEFDLEKERKISLRTLIDRSAVESFGSGG---RICITARVYPVALV 334 P +G FE +++ + +I RTL DR+ SGG ++ I AR+ ALV Sbjct: 761 PVFGPSFEVEVDTDLRIRSRTLDDRTVPYECLSGGAKEQLGILARLAGAALV 812
>Y1278_MYCTU (P64795) Hypothetical protein Rv1278/MT1315| Length = 875 Score = 29.6 bits (65), Expect = 6.6 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -3 Query: 480 PAYGGFFEFDLEKERKISLRTLIDRSAVESFGSGG---RICITARVYPVALV 334 P +G FE +++ + +I RTL DR+ SGG ++ I AR+ ALV Sbjct: 761 PVFGPSFEVEVDTDLRIRSRTLDDRTVPYECLSGGAKEQLGILARLAGAALV 812
>FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment)| Length = 1328 Score = 29.6 bits (65), Expect = 6.6 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -2 Query: 229 EGWKCDRCLAQKSNSSQSCD*KTGHALVHFN 137 +GW+CD C + + S D G L HF+ Sbjct: 1277 QGWRCDNCRRPGAGVTPSADGVVGQTLSHFS 1307
>CLCN4_RAT (P51794) Chloride channel protein 4 (ClC-4)| Length = 747 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -2 Query: 577 CSALQGLQITAKVHDPHVLRPKKVFPETRT---VHTSLWRL 464 C AL+ Q+ ++DP++ RP P+ V+T++W+L Sbjct: 392 CGALESSQLCDYINDPNMTRPVDDIPDRPAGVGVYTAMWQL 432
>CLCN4_MOUSE (Q61418) Chloride channel protein 4 (ClC-4)| Length = 747 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -2 Query: 577 CSALQGLQITAKVHDPHVLRPKKVFPETRT---VHTSLWRL 464 C AL+ Q+ ++DP++ RP P+ V+T++W+L Sbjct: 392 CGALESSQLCDYINDPNMTRPVDDIPDRPAGVGVYTAMWQL 432 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,765,734 Number of Sequences: 219361 Number of extensions: 1901557 Number of successful extensions: 4267 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4241 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
