| Clone Name | rbags28p07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds Length = 2319 Score = 702 bits (354), Expect = 0.0 Identities = 432/458 (94%) Strand = Plus / Minus Query: 123 tacacatggtaaatattgaaatgaacaagtgcgtggccagtctttcaatcacacgactga 182 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1981 tacacgtggtaaatattgaaatcaacaagtgcgtggccagtctttcaatcacacgtctga 1922 Query: 183 ctagaattgctcttttgtgctaagcatcgatcacatttccacccttcatcacattcactt 242 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1921 ctagaattgctcttctgtgctaagcatcgatcacacttccacccttcatcacattcactt 1862 Query: 243 gtgcttttttcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgt 302 ||||| | |||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 1861 gtgctctcttcatgctccatgcccttagctgtggcactccgaccgtggtacttccattgt 1802 Query: 303 tgaaagcatacatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccg 362 |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1801 tgaaggcatacatgtgggtggcgccgttgtcgacaagcgccaccggataaactctggccg 1742 Query: 363 tgatgcagatcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcc 422 ||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||| Sbjct: 1741 tgatgcagatcctgccaccgctgccgaagctctccaccgccgaccgatcgatcagagtcc 1682 Query: 423 tgagggatatctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtg 482 ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 tgagggatatccttttttcattttcaaggtcaaattcaaagaagcctccataggctggtg 1622 Query: 483 tgtacagtcctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtact 542 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 1621 tgtacagtcctggtctcagggaagaccttctaagatcggagcacatgaggataatgtact 1562 Query: 543 tttgctgtgatttgtaaaccctgaagtgcactgcagtg 580 |||||| |||||||||||||||||| |||||||||||| Sbjct: 1561 tttgctctgatttgtaaaccctgaaatgcactgcagtg 1524 Score = 145 bits (73), Expect = 2e-31 Identities = 101/109 (92%), Gaps = 1/109 (0%) Strand = Plus / Minus Query: 14 tggcatgcacaagctaatatt-gtttactccaaacctctgcgaatttaaatcgttggtgg 72 ||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| ||| Sbjct: 2205 tggcatgcacaagctcatatttgtttattccaaacctctacgaatttaaatcgttgttgg 2146 Query: 73 caacaagcactagtcttacttaccaattgccactacttcaaaagttcaa 121 |||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 2145 caacaagcactatgcttacttaccaattgcaactacttcaaaagttcaa 2097
>dbj|AB089270.1| Triticum aestivum A211 mRNA for fructan exohydrolase, complete cds Length = 2039 Score = 327 bits (165), Expect = 2e-86 Identities = 298/340 (87%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 237 tcacttgtgcttttttcatgctccatgcccttagttgcggcactctgaccgtggtacttc 296 ||||||||||| | |||||||||| ||||| || || ||||||||||| |||| ||| | Sbjct: 1838 tcacttgtgctctcctcatgctccaagccctgagctgaggcactctgactgtggcactgc 1779 Query: 297 cattgttgaaagcatacatgtggg--tggcgcc-gtcatcgacaagtgccaccggataaa 353 ||||||| || ||||||||||||| ||||| ||| |||||||| | ||| || |||| Sbjct: 1778 cattgttaaaggcatacatgtggggttggcggttgtcgtcgacaagcgacactgggtaaa 1719 Query: 354 ctctggccgtgatgcagatcctgccaccgctgccgaagctctccacggcggacctatcaa 413 |||| ||| ||||||||| ||||||||| | |||||||||||||| || |||| ||||| Sbjct: 1718 ctctagccatgatgcagaccctgccaccaccaccgaagctctccaccgcagaccgatcaa 1659 Query: 414 tcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaagaagcctccat 473 ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1658 tcagagttctgagggagatcttcctttccttttcaaggtcaaattcaaagaagcctccat 1599 Query: 474 aggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcggagcacatgagga 533 ||| |||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| Sbjct: 1598 aggttggtgtgtccagtcctggtgtcagggaagaccttcttagatcagagcacatgagga 1539 Query: 534 tcatgtacttttgctgtgatttgtaaaccctgaagtgcac 573 ||||||| |||| ||||||||||||||| ||||||||||| Sbjct: 1538 tcatgtaatttttctgtgatttgtaaactctgaagtgcac 1499 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 115 agttcaaatacacatggtaaatattgaaa 143 ||||||||||| |||| |||||||||||| Sbjct: 1940 agttcaaatacccatgctaaatattgaaa 1912
>gb|DQ073968.1| Lolium perenne fructan exohydrolase mRNA, complete cds Length = 1716 Score = 327 bits (165), Expect = 2e-86 Identities = 288/329 (87%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||||| || || ||||| ||||| |||||||| ||||||||||| || | Sbjct: 1696 tcatgctccatgccctgagctgtggcaccctgactgtggtactgccattgttgaaggcgt 1637 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||| |||| || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1636 acatgtgggccccgccatcgtcgacaagcaccaccggataaactctggccatgatgcaga 1577 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 ||||||||||| || ||||||||||| || |||| |||||||||||| || || |||| Sbjct: 1576 ccctgccaccgcctccaaagctctccaccgctgaccgatcaatcagagttctcagagata 1517 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 1516 tctttctttccttctgaaggtcaaattcaaagaagcctccatatgctggtgtgtacattc 1457 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||| ||||||||||||||||||| | || || ||||||||||||||||| ||||||| | Sbjct: 1456 ctgatctcagggaagaccttcttggatcagaacacatgaggatcatgtagctttgctgcg 1397 Query: 552 atttgtaaaccctgaagtgcactgcagtg 580 |||||||||| |||||||| || |||||| Sbjct: 1396 atttgtaaactctgaagtgtacagcagtg 1368
>dbj|AB089271.1| Triticum aestivum C311 mRNA for fructan exohydrolase, complete cds Length = 2044 Score = 287 bits (145), Expect = 2e-74 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 237 tcacttgtgcttttttcatgctccatgcccttagttgcggcactctgaccgtggtacttc 296 ||||||||||| | |||||||||| ||| | || || || |||||||| || | ||| | Sbjct: 1810 tcacttgtgctctcctcatgctccacgccatgaggtgaggaactctgacagttgcactgc 1751 Query: 297 cattgttgaaagcatacatgtggg--tggcgc-cgtcatcgacaagtgccaccggataaa 353 ||||||| || ||||||||||||| ||| | |||| |||||||||| ||| || |||| Sbjct: 1750 cattgttaaaggcatacatgtggggctggtggtcgtcgtcgacaagtgacactgggtaaa 1691 Query: 354 ctctggccgtgatgcagatcctgccaccgctgccgaagctctccacggcggacctatcaa 413 |||| ||| ||||||||| ||||||||||| |||||||||||||| || |||| ||||| Sbjct: 1690 ctctcgccatgatgcagaccctgccaccgccaccgaagctctccaccgcagaccgatcaa 1631 Query: 414 tcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaagaagcctccat 473 ||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1630 tcagagttctgagagagatcttcctttccttttcaaggtcaaattcaaagaagcctccat 1571 Query: 474 aggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcggagcacatgagga 533 |||| ||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| Sbjct: 1570 aggccggtgtgtccagtcctggtgtcagggaagaccttcttagatcagagcacatgagga 1511 Query: 534 tcatgtacttttgctgtgatttgtaaaccctgaagtgcac 573 |||| || |||| ||||||| |||| || ||||||||||| Sbjct: 1510 tcatataatttttctgtgatctgtagactctgaagtgcac 1471 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 115 agttcaaatacacatggtaaatattgaaa 143 ||||||||||| |||| |||||||||||| Sbjct: 1912 agttcaaatacccatgctaaatattgaaa 1884
>gb|AF030421.1| Triticum aestivum cell wall invertase (IVR3) mRNA, partial cds Length = 1563 Score = 278 bits (140), Expect = 2e-71 Identities = 287/336 (85%) Strand = Plus / Minus Query: 232 cacattcacttgtgcttttttcatgctccatgcccttagttgcggcactctgaccgtggt 291 ||||||||||||||| || |||||| ||||||| || || || ||||| |||||||||| Sbjct: 1398 cacattcacttgtgccttcttcatggtccatgcgctgagctgtggcaccctgaccgtggc 1339 Query: 292 acttccattgttgaaagcatacatgtgggtggcgccgtcatcgacaagtgccaccggata 351 |||||||||||||||||| || ||||||| |||| | ||| | || || ||||||| Sbjct: 1338 acttccattgttgaaagcgtaaatgtgggccctgccgacgtcggcgagcaccgccggata 1279 Query: 352 aactctggccgtgatgcagatcctgccaccgctgccgaagctctccacggcggacctatc 411 |||||||| |||||||| | ||||||||||| ||||||| ||||||| || |||| || Sbjct: 1278 aactctggatgtgatgcaaaccctgccaccgccgccgaagttctccaccgccgaccggtc 1219 Query: 412 aatcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaagaagcctcc 471 ||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1218 aatcagagttctgagtgatatcttcctttccttttcaagatcaaattcaaagaagcctcc 1159 Query: 472 ataggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcggagcacatgag 531 |||||||||| | | ||| ||||||||||||||||||||||||| || ||||||||||| Sbjct: 1158 ataggctggtttctccagatctggtctcagggaagaccttcttagatcagagcacatgag 1099 Query: 532 gatcatgtacttttgctgtgatttgtaaaccctgaa 567 | ||||||||||| |||||| ||||| || ||||| Sbjct: 1098 taccatgtacttttcctgtgacttgtagactctgaa 1063
>emb|AJ516025.1|TAE516025 Triticum aestivum mRNA for fructan 1-exohydrolase w1 precursor (1-FEH w1 gene) Length = 2101 Score = 278 bits (140), Expect = 2e-71 Identities = 287/336 (85%) Strand = Plus / Minus Query: 232 cacattcacttgtgcttttttcatgctccatgcccttagttgcggcactctgaccgtggt 291 ||||||||||||||| || ||||| ||||||| || || || ||||| |||||||||| Sbjct: 1773 cacattcacttgtgccttcctcatggtccatgcgctgagctgtggcaccctgaccgtggc 1714 Query: 292 acttccattgttgaaagcatacatgtgggtggcgccgtcatcgacaagtgccaccggata 351 |||||||||||||||||| || ||||||| |||| | ||| | || || ||||||| Sbjct: 1713 acttccattgttgaaagcgtaaatgtgggccctgccgacgtcggcgagcaccgccggata 1654 Query: 352 aactctggccgtgatgcagatcctgccaccgctgccgaagctctccacggcggacctatc 411 |||||||| |||||||| | ||||||||||| ||||||||||||||| || |||| || Sbjct: 1653 aactctggatgtgatgcaaaccctgccaccgccgccgaagctctccaccgccgaccggtc 1594 Query: 412 aatcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaagaagcctcc 471 ||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1593 aatcagagttctgagtgatatcttcctttccttttcaagatcaaattcaaagaagcctcc 1534 Query: 472 ataggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcggagcacatgag 531 |||||||||| | | ||| ||||||||||||||||||||||||| || ||||||||||| Sbjct: 1533 ataggctggtttctccagatctggtctcagggaagaccttcttagatcagagcacatgag 1474 Query: 532 gatcatgtacttttgctgtgatttgtaaaccctgaa 567 | ||||||||||| |||||| ||||| || ||||| Sbjct: 1473 taccatgtacttttcctgtgacttgtagactctgaa 1438
>emb|AJ564996.1|TAE564996 Triticum aestivum mRNA for fructan 1-exohydrolase w3 precursor (1-FEH w3 gene) Length = 2108 Score = 272 bits (137), Expect = 1e-69 Identities = 293/345 (84%) Strand = Plus / Minus Query: 223 acccttcatcacattcacttgtgcttttttcatgctccatgcccttagttgcggcactct 282 ||||||| ||||||||||||||| || ||||| ||||||| || || || ||||| || Sbjct: 1846 acccttctccacattcacttgtgccttcctcatggtccatgcgctgagctgtggcaccct 1787 Query: 283 gaccgtggtacttccattgttgaaagcatacatgtgggtggcgccgtcatcgacaagtgc 342 |||||||| |||||||||||||||||| || ||||||| |||| | ||| | || | Sbjct: 1786 gaccgtggcacttccattgttgaaagcgtaaatgtgggcactgccgacgtcggccagcac 1727 Query: 343 caccggataaactctggccgtgatgcagatcctgccaccgctgccgaagctctccacggc 402 | ||||||||||||||| |||||||| | ||||||||||| |||||||||||||| || Sbjct: 1726 cgccggataaactctggatgtgatgcaaaccctgccaccgccaccgaagctctccaccgc 1667 Query: 403 ggacctatcaatcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaa 462 |||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1666 cgaccggtcaatcagagttctgagtgatatcttcctttccttttcaagatcaaattcaaa 1607 Query: 463 gaagcctccataggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcgga 522 ||||||||||||||||||| | | ||| ||||||||||||||||||||||||| || || Sbjct: 1606 gaagcctccataggctggtttctccagatctggtctcagggaagaccttcttagatcaga 1547 Query: 523 gcacatgaggatcatgtacttttgctgtgatttgtaaaccctgaa 567 ||||||||| | ||||||||||| |||||| ||||| || ||||| Sbjct: 1546 gcacatgagtaccatgtacttttcctgtgacttgtagactctgaa 1502
>emb|AJ508387.1|TAE508387 Triticum aestivum mRNA for fructan 1-exohydrolase (1-FEH gene) Length = 2225 Score = 264 bits (133), Expect = 3e-67 Identities = 292/345 (84%) Strand = Plus / Minus Query: 223 acccttcatcacattcacttgtgcttttttcatgctccatgcccttagttgcggcactct 282 ||||||| ||||||||||||||| || ||||| ||||||| || || || ||||| || Sbjct: 1988 acccttctccacattcacttgtgccttcctcatggtccatgcgctgagctgtggcaccct 1929 Query: 283 gaccgtggtacttccattgttgaaagcatacatgtgggtggcgccgtcatcgacaagtgc 342 |||||||| ||||||||||||||| || || ||||||| |||| | ||| | || | Sbjct: 1928 gaccgtggcacttccattgttgaatgcgtaaatgtgggccctgccgacgtcggcgagcac 1869 Query: 343 caccggataaactctggccgtgatgcagatcctgccaccgctgccgaagctctccacggc 402 | ||||||||||||||| |||||||| | ||||||||||| |||||||||||||| || Sbjct: 1868 cgccggataaactctggatgtgatgcaaaccctgccaccgccaccgaagctctccactgc 1809 Query: 403 ggacctatcaatcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaa 462 |||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1808 cgaccggtcaatcagagttctgagtgatatcttcctttccttttcaagatcaaattcaaa 1749 Query: 463 gaagcctccataggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcgga 522 ||||||||||||||||||| | | ||| ||||||||||||||||||||||||| || || Sbjct: 1748 gaagcctccataggctggtttctccagatctggtctcagggaagaccttcttagatcaga 1689 Query: 523 gcacatgaggatcatgtacttttgctgtgatttgtaaaccctgaa 567 ||||||||| | ||||||||||| |||||| ||||| || ||||| Sbjct: 1688 gcacatgagtaccatgtacttttcctgtgacttgtagactctgaa 1644
>gb|AY693396.2| Lolium perenne putative fructan 1-exohydrolase precursor, mRNA, partial cds Length = 989 Score = 254 bits (128), Expect = 3e-64 Identities = 269/316 (85%) Strand = Plus / Minus Query: 258 tccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcatacatgt 317 ||||||| || || || ||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 985 tccatgcgctgagctgtggcacccagaccgtggtacttccattgttgaaggcatacatgt 926 Query: 318 gggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcagatcctgc 377 ||| || ||||| |||| ||||| ||||||||||| || |||| | || ||| | Sbjct: 925 gggccctcccttcatccacaatcgccactggataaactctagctatgatactgaccctac 866 Query: 378 caccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggatatctttc 437 |||||| || || ||||||||||| |||| |||||| ||||| || || |||||||| | Sbjct: 865 caccgccaccaaaactctccacggccgaccgatcaattagagttctcagagatatcttcc 806 Query: 438 tttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtcctggtc 497 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 805 tttccttttcaagatcgaattcaaagaagcctccataggctggtgtgtacagtccttgtc 746 Query: 498 tcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtgatttgt 557 |||||||||||||||||| || ||||||||||| | |||||||| || ||||||||||| Sbjct: 745 tcagggaagaccttcttatatcagagcacatgagtaccatgtactctttctgtgatttgt 686 Query: 558 aaaccctgaagtgcac 573 | || ||||||||||| Sbjct: 685 agactctgaagtgcac 670
>gb|AY578161.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 4 mRNA, complete cds Length = 2042 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 1797 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 1738 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 1737 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 1681 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || |||||||| || | ||| | Sbjct: 1680 ccctgccgccgccgccgaagctctccaccgccgaccggtcgatcagagttctcaaggaga 1621 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1620 tcttcttctccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 1561 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||||||||| || || ||||| || || ||||||| ||| | ||||||||| |||| || Sbjct: 1560 ctggtctcaacgatgatcttctcagatcagagcacaggagaaccatgtacttctgctctg 1501 Query: 552 atttgtaaaccctgaagtgcac 573 |||||||||||||||||||||| Sbjct: 1500 atttgtaaaccctgaagtgcac 1479
>dbj|AK067444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F12, full insert sequence Length = 2100 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 1855 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 1796 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 1795 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 1739 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || |||||||| || | ||| | Sbjct: 1738 ccctgccgccgccgccgaagctctccaccgccgaccggtcgatcagagttctcaaggaga 1679 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1678 tcttcttctccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 1619 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||||||||| || || ||||| || || ||||||| ||| | ||||||||| |||| || Sbjct: 1618 ctggtctcaacgatgatcttctcagatcagagcacaggagaaccatgtacttctgctctg 1559 Query: 552 atttgtaaaccctgaagtgcac 573 |||||||||||||||||||||| Sbjct: 1558 atttgtaaaccctgaagtgcac 1537
>dbj|AK061744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F09, full insert sequence Length = 1318 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 1059 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 1000 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 999 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 943 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || |||||||| || | ||| | Sbjct: 942 ccctgccgccgccgccgaagctctccaccgccgaccggtcgatcagagttctcaaggaga 883 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 882 tcttcttctccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 823 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||||||||| || || ||||| || || ||||||| ||| | ||||||||| |||| || Sbjct: 822 ctggtctcaacgatgatcttctcagatcagagcacaggagaaccatgtacttctgctctg 763 Query: 552 atttgtaaaccctgaagtgcac 573 |||||||||||||||||||||| Sbjct: 762 atttgtaaaccctgaagtgcac 741
>emb|AJ605333.1| Hordeum vulgare mRNA for fructan 1-exohydrolase precursor (1-feh gene) Length = 1994 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 345 ccggataaactctggccgtgatgcagatcctgccaccgctgccgaagctctccacggcgg 404 ||||||||||||||| |||||||| | ||| || |||| |||||||||||||| || | Sbjct: 1698 ccggataaactctggatgtgatgcaaaccctacccccgccaccgaagctctccaccgccg 1639 Query: 405 acctatcaatcagagtcctgagggatatctttctttccttttcaaggtcaaattcaaaga 464 ||| |||||||| || ||||| |||||||| ||||||||| |||| ||||||||||||| Sbjct: 1638 accggtcaatcagggttctgagtgatatcttcctttcctttgcaagatcaaattcaaaga 1579 Query: 465 agcctccataggctggtgtgtacagtcctggtctcagggaagaccttcttaggtcggagc 524 ||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||| Sbjct: 1578 agcctccataggctggtttctccagtcctggtctcagggaagaccttcttaggtcagagc 1519 Query: 525 acatgaggatcatgtacttttgctgtgatttgtaaaccctgaa 567 ||||||| | ||||||||||| |||||| ||||| || ||||| Sbjct: 1518 acatgagtaccatgtacttttcctgtgacttgtacactctgaa 1476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 223 acccttcatcacattcacttgtgcttttttcatgctccatgcccttagttgcggcactct 282 ||||||| ||||||||||||||| || ||||| ||||||| || || || ||||| || Sbjct: 1820 acccttctccacattcacttgtgccttcctcatggtccatgcgctgagctgtggcaccct 1761 Query: 283 gaccgtggtacttccattgttgaaagcatacatgtg 318 |||| ||| | |||| ||||||||||| || ||||| Sbjct: 1760 gaccatggcatttccgttgttgaaagcgtaaatgtg 1725
>gb|AY575552.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 5 mRNA, partial cds Length = 506 Score = 214 bits (108), Expect = 2e-52 Identities = 269/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 436 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 377 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 376 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 320 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || |||||||| || | ||| | Sbjct: 319 ccctgccgccgccgccgaagctctccaccgccgaccggtcgatcagagttctcaaggaga 260 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 259 tcttcttctccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 200 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||||||||| || || ||||| || || ||||||| ||| ||||||||| |||| || Sbjct: 199 ctggtctcaacgatgatcttctcagatcagagcacaggagagccatgtacttctgctctg 140 Query: 552 atttgtaaaccctgaagtgcac 573 |||||||||||||||||||||| Sbjct: 139 atttgtaaaccctgaagtgcac 118
>dbj|AB154521.1| Oryza sativa (japonica cultivar-group) OsCIN4 mRNA for cell wall invertase, complete cds Length = 2068 Score = 214 bits (108), Expect = 2e-52 Identities = 269/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 1791 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 1732 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 1731 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 1675 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || |||||||| || | ||| | Sbjct: 1674 ccctgccgccgccgccgaagctctccaccgccgaccggtcgatcagagttctcaaggaga 1615 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | |||||||| |||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1614 tcttcttctccttttcgaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 1555 Query: 492 ctggtctcagggaagaccttcttaggtcggagcacatgaggatcatgtacttttgctgtg 551 ||||||||| || || ||||| || || ||||||| ||| | ||||||||| |||| || Sbjct: 1554 ctggtctcaacgatgatcttctcagatcagagcacaggagaaccatgtacttctgctctg 1495 Query: 552 atttgtaaaccctgaagtgcac 573 |||||||||||||||||||||| Sbjct: 1494 atttgtaaaccctgaagtgcac 1473
>ref|NM_189408.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 145 bits (73), Expect = 2e-31 Identities = 206/249 (82%), Gaps = 6/249 (2%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 1357 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 1298 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 1297 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 1241 Query: 372 tcctgccaccgctgccgaagctctccacggcggacctatcaatcagagtcctgagggata 431 |||||| |||| ||||||||||||||| || |||| || | |||| || | ||| | Sbjct: 1240 ccctgccgccgccgccgaagctctccaccgccgaccggtcga---gagttctcaaggaga 1184 Query: 432 tctttctttccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtc 491 |||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1183 tcttcttctccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtc 1124 Query: 492 ctggtctca 500 ||||||||| Sbjct: 1123 ctggtctca 1115 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 507 accttcttaggtcggagcacatgaggatcatgtacttttgctgtgatttgtaaaccctga 566 ||||||| || || ||||||| ||| | ||||||||| |||| ||||||||||||||||| Sbjct: 1096 accttctcagatcagagcacaggagaaccatgtacttctgctctgatttgtaaaccctga 1037 Query: 567 agtgcac 573 ||||||| Sbjct: 1036 agtgcac 1030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 440 tccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtcctggtctc 499 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 42622175 tccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtcctggtctc 42622116 Query: 500 a 500 | Sbjct: 42622115 a 42622115 Score = 83.8 bits (42), Expect = 6e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 42622465 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 42622406 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 42622405 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 42622349 Query: 372 tcctgccaccgctgccgaagctctccac 399 |||||| |||| ||||||||||||||| Sbjct: 42622348 ccctgccgccgccgccgaagctctccac 42622321 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 507 accttcttaggtcggagcacatgaggatcatgtacttttgctgtgatttgtaaaccctga 566 ||||||| || || ||||||| ||| | ||||||||| |||| ||||||||||||||||| Sbjct: 42621899 accttctcagatcagagcacaggagaaccatgtacttctgctctgatttgtaaaccctga 42621840 Query: 567 agtgcac 573 ||||||| Sbjct: 42621839 agtgcac 42621833
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 440 tccttttcaaggtcaaattcaaagaagcctccataggctggtgtgtacagtcctggtctc 499 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 143058 tccttttcaaggtcatattcaaagaagcctccatatgctggtgtgtacagtcctggtctc 142999 Query: 500 a 500 | Sbjct: 142998 a 142998 Score = 83.8 bits (42), Expect = 6e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Minus Query: 252 tcatgctccatgcccttagttgcggcactctgaccgtggtacttccattgttgaaagcat 311 |||||||||||||| | || |||| ||| | |||||| |||| ||||||||||| || | Sbjct: 143348 tcatgctccatgccttgagctgcgacaccttcaccgtgctactgccattgttgaaggcgt 143289 Query: 312 acatgtgggtggcgccgtcatcgacaagtgccaccggataaactctggccgtgatgcaga 371 ||||||||||||||||||| |||| ||| |||| || ||||||||| ||||||| Sbjct: 143288 acatgtgggtggcgccgtcgacgacc---gccgccgggtacactctggccatgatgcacg 143232 Query: 372 tcctgccaccgctgccgaagctctccac 399 |||||| |||| ||||||||||||||| Sbjct: 143231 ccctgccgccgccgccgaagctctccac 143204 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 507 accttcttaggtcggagcacatgaggatcatgtacttttgctgtgatttgtaaaccctga 566 ||||||| || || ||||||| ||| | ||||||||| |||| ||||||||||||||||| Sbjct: 142782 accttctcagatcagagcacaggagaaccatgtacttctgctctgatttgtaaaccctga 142723 Query: 567 agtgcac 573 ||||||| Sbjct: 142722 agtgcac 142716
>gb|AY106676.1| Zea mays PCO093097 mRNA sequence Length = 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 275 ggcactctgaccgtggtacttccattgttgaaagcatacatgtgggtggcgccgtcatcg 334 ||||||||||| ||| || | ||||||||||| || |||||| | ||| ||||||| ||| Sbjct: 826 ggcactctgacggtgctagtgccattgttgaacgcgtacatgcgagtgccgccgtcgtcg 767 Query: 335 acaagtgccaccggataaactctggccgtgatgcagatcctgccaccgctgccgaagctc 394 || || ||| ||||||| || |||||| ||||||| | |||||| || | ||||||||| Sbjct: 766 acgagcgccgccggatagaccctggccatgatgcacaccctgccgcctccaccgaagctc 707 Query: 395 tccac 399 ||||| Sbjct: 706 tccac 702
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/57 (89%), Gaps = 4/57 (7%) Strand = Plus / Plus Query: 448 aaggtcaaattcaaagaagcctcc--ataggctg--gtgtgtacagtcctggtctca 500 ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||| Sbjct: 4732234 aaggtcatattcaaagaagcctccatatatgctggtgtgtgtacagtcctggtctca 4732290 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgctgccgaagctctccac 399 |||||||||||||||||||| Sbjct: 4732055 ccgctgccgaagctctccac 4732074
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/57 (89%), Gaps = 4/57 (7%) Strand = Plus / Plus Query: 448 aaggtcaaattcaaagaagcctcc--ataggctg--gtgtgtacagtcctggtctca 500 ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||| Sbjct: 12824 aaggtcatattcaaagaagcctccatatatgctggtgtgtgtacagtcctggtctca 12880 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgctgccgaagctctccac 399 |||||||||||||||||||| Sbjct: 12645 ccgctgccgaagctctccac 12664
>ref|XM_464363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 448 aaggtcaaattcaaagaagcctccata 474 ||||||| ||||||||||||||||||| Sbjct: 223 aaggtcatattcaaagaagcctccata 249 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgctgccgaagctctccac 399 |||||||||||||||||||| Sbjct: 100 ccgctgccgaagctctccac 119
>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence Length = 260402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 154826 ttcaaaagttcaaatacacat 154806
>gb|BC026150.1| Mus musculus frizzled homolog 6 (Drosophila), mRNA (cDNA clone MGC:14004 IMAGE:3983985), complete cds Length = 4089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 3160 ttcaaaagttcaaatacacat 3140
>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence Length = 184690 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 ctttctttccttttcaaggtcaaat 457 |||||||||||||| |||||||||| Sbjct: 108775 ctttctttcctttttaaggtcaaat 108751
>gb|AC165352.2| Mus musculus BAC clone RP23-205C7 from chromosome 15, complete sequence Length = 202977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 157148 ttcaaaagttcaaatacacat 157168
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence Length = 221980 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 tacttcaaaagttcaaataca 126 ||||||||||||||||||||| Sbjct: 58314 tacttcaaaagttcaaataca 58294
>ref|NM_008056.2| Mus musculus frizzled homolog 6 (Drosophila) (Fzd6), mRNA Length = 4089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 3160 ttcaaaagttcaaatacacat 3140
>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence Length = 220032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 atctttctttccttttcaagg 451 ||||||||||||||||||||| Sbjct: 159969 atctttctttccttttcaagg 159949
>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence Length = 114206 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tctttccttttcaaggtcaaa 456 ||||||||||||||||||||| Sbjct: 27718 tctttccttttcaaggtcaaa 27698
>dbj|AK143186.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303E12 product:activin receptor IIA, full insert sequence Length = 5234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 atctttctttccttttcaagg 451 ||||||||||||||||||||| Sbjct: 913 atctttctttccttttcaagg 893
>dbj|AK138964.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530031H21 product:frizzled homolog 6 (Drosophila), full insert sequence Length = 2679 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 1884 ttcaaaagttcaaatacacat 1864
>dbj|AK088399.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014N03 product:FRIZZLED 6 PRECURSOR (FRIZZLED-6) (FZ-6) (MFZ6), full insert sequence Length = 3948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ttcaaaagttcaaatacacat 129 ||||||||||||||||||||| Sbjct: 3036 ttcaaaagttcaaatacacat 3016
>ref|XM_311276.1| Anopheles gambiae str. PEST ENSANGP00000022414 (ENSANGG00000020585), partial mRNA Length = 513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 ctgccaccgctgccgaagctc 394 ||||||||||||||||||||| Sbjct: 145 ctgccaccgctgccgaagctc 165
>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence Length = 216362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 tacttcaaaagttcaaataca 126 ||||||||||||||||||||| Sbjct: 118958 tacttcaaaagttcaaataca 118938
>gb|AC131658.3| Mus musculus BAC clone RP23-239F24 from 3, complete sequence Length = 200955 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 atctttctttccttttcaagg 451 ||||||||||||||||||||| Sbjct: 42497 atctttctttccttttcaagg 42477
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 atctttctttccttttcaagg 451 ||||||||||||||||||||| Sbjct: 147099 atctttctttccttttcaagg 147079
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 caaatacacatggtaaatattgaa 142 ||||| |||||||||||||||||| Sbjct: 95466 caaatgcacatggtaaatattgaa 95443
>emb|AL445239.8| Human DNA sequence from clone RP11-540L11 on chromosome X Contains the 3' end of the CASK gene for calcium/calmodulin-dependent serine protein kinase (MAGUK family) and a novel gene, complete sequence Length = 75677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 22778 gggatatctttctttccttt 22759
>emb|AL355358.9| Human DNA sequence from clone RP11-536L15 on chromosome 6 Contains a ribosomal protein S29 (RPS29) pseudogene, complete sequence Length = 141825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttacttaccaattgccacta 107 |||||||||||||||||||| Sbjct: 98549 ttacttaccaattgccacta 98530
>gb|BC035990.1| Homo sapiens, similar to calcium/calmodulin-dependent serine protein kinase, clone IMAGE:4334367, mRNA Length = 2040 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 1239 gggatatctttctttccttt 1258
>dbj|AB236427.1| Pyrus communis Sd-RNase gene for Sd-RNase, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 actacttcaaaagttcaaat 123 |||||||||||||||||||| Sbjct: 23 actacttcaaaagttcaaat 42
>gb|AC078871.16| Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gatatctttctttccttttc 447 |||||||||||||||||||| Sbjct: 34119 gatatctttctttccttttc 34100
>gb|AC062031.7| Homo sapiens BAC clone RP11-474G7 from 2, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 agggaagaccttcttaggtc 519 |||||||||||||||||||| Sbjct: 149679 agggaagaccttcttaggtc 149660
>gb|AF262405.1|AF262405 Homo sapiens clone phi9 calcium/calmodulin-dependent serine protein kinase membrane-associated guanylate kinase (CASK) mRNA, partial cds Length = 3460 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 3057 gggatatctttctttccttt 3076
>gb|AF262404.1|AF262404 Homo sapiens clone phi7 calcium/calmodulin-dependent serine protein kinase membrane-associated guanylate kinase (CASK) mRNA, partial cds Length = 3111 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 2708 gggatatctttctttccttt 2727
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 atggtaaatattgaaatgaa 147 |||||||||||||||||||| Sbjct: 69777 atggtaaatattgaaatgaa 69796
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene) Length = 2095 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 386 ccgaagctctccacggcggacctatcaatcag 417 ||||||||||||||| |||||| ||| ||||| Sbjct: 1675 ccgaagctctccacgacggaccgatcgatcag 1644
>emb|BX537337.9| Zebrafish DNA sequence from clone CH211-222E23 in linkage group 19, complete sequence Length = 217375 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aaatacacatggtaaatatt 139 |||||||||||||||||||| Sbjct: 201652 aaatacacatggtaaatatt 201633
>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence Length = 154354 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gatatctttctttccttttc 447 |||||||||||||||||||| Sbjct: 94971 gatatctttctttccttttc 94952
>gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.214_O_1, complete sequence Length = 166687 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 tttctttccttttcaaggtcaaat 457 |||||||||||||||||| ||||| Sbjct: 64320 tttctttccttttcaaggacaaat 64343
>gb|AF035582.1|AF035582 Homo sapiens CASK mRNA, complete cds Length = 3937 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 3150 gggatatctttctttccttt 3169
>dbj|AB208859.1| Homo sapiens mRNA for calcium/calmodulin-dependent serine protein kinase (MAGUK family) variant protein Length = 3965 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 3197 gggatatctttctttccttt 3216
>dbj|AB039327.2| Homo sapiens CASK mRNA for calcium/calmodulin-dependent serine protein kinase, complete cds Length = 2810 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gggatatctttctttccttt 445 |||||||||||||||||||| Sbjct: 2357 gggatatctttctttccttt 2376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,378,522 Number of Sequences: 3902068 Number of extensions: 5378522 Number of successful extensions: 121203 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121033 Number of HSP's gapped (non-prelim): 162 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)