ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf... 234 1e-61
2PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (... 234 2e-61
3PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf... 230 4e-60
4PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC... 225 9e-59
5UBIE_SHEON (Q8E9R7) Ubiquinone/menaquinone biosynthesis methyltr... 37 0.044
6UBIE_PHOLL (Q7MZ81) Ubiquinone/menaquinone biosynthesis methyltr... 33 0.83
7TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine syntheta... 32 1.4
8GH317_ARATH (Q9FZ87) Indole-3-acetic acid-amido synthetase GH3.1... 32 1.8
9OS9_YARLI (Q6C3U1) Protein OS-9 homolog precursor 31 4.1
10EFG_LACLA (Q9CDG1) Elongation factor G (EF-G) 30 5.4
11MRAW_CHLAB (Q5L6B5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 30 5.4
12YAFE_ECOLI (P30866) Hypothetical protein yafE 30 5.4
13UBIE_VIBVY (Q7MQ33) Ubiquinone/menaquinone biosynthesis methyltr... 30 5.4
14UBIE_VIBVU (Q8DDP9) Ubiquinone/menaquinone biosynthesis methyltr... 30 5.4
15SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2 30 5.4
16UBIE_VIBPA (Q87TH4) Ubiquinone/menaquinone biosynthesis methyltr... 30 5.4
17CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-de... 30 5.4
18UBIE_VIBCH (Q9KVQ6) Ubiquinone/menaquinone biosynthesis methyltr... 30 7.0
19KSGA_METKA (Q8TWU7) Probable dimethyladenosine transferase (EC 2... 30 7.0
20UBIE_SALTY (P0A2K5) Ubiquinone/menaquinone biosynthesis methyltr... 30 7.0
21UBIE_SALTI (P0A2K6) Ubiquinone/menaquinone biosynthesis methyltr... 30 7.0
22UBIE_IDILO (Q5QYG2) Ubiquinone/menaquinone biosynthesis methyltr... 30 7.0
23SAFB2_HUMAN (Q14151) Scaffold attachment factor B2 30 7.0
24UBIE_HAEDU (P59911) Ubiquinone/menaquinone biosynthesis methyltr... 30 7.0
25UBIG_XANAC (Q8PK00) 3-demethylubiquinone-9 3-methyltransferase (... 30 9.1
26UBIE_YERPS (Q66FT0) Ubiquinone/menaquinone biosynthesis methyltr... 30 9.1
27UBIE_YERPE (Q8D1I3) Ubiquinone/menaquinone biosynthesis methyltr... 30 9.1

>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score =  234 bits (598), Expect = 1e-61
 Identities = 110/139 (79%), Positives = 125/139 (89%)
 Frame = -2

Query: 694 IYSRDTILHIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDV 515
           IYSRDTILHIQDKPALFR FFKWLKPGGKVLI+DYCRS  TPS EFA YIKQRGYDLHDV
Sbjct: 336 IYSRDTILHIQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPEFAEYIKQRGYDLHDV 395

Query: 514 KTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSA 335
           + YG+ML+DAGF DVIAEDRTDQF++VL REL + EK KE F++DFS+EDY+DIV GWSA
Sbjct: 396 QAYGQMLKDAGFDDVIAEDRTDQFVQVLRRELEKVEKEKEEFISDFSEEDYNDIVGGWSA 455

Query: 334 KLKRSSAGEQKWGLFIATK 278
           KL+R+++GEQKWGLFIA K
Sbjct: 456 KLERTASGEQKWGLFIADK 474



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>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score =  234 bits (596), Expect = 2e-61
 Identities = 109/139 (78%), Positives = 123/139 (88%)
 Frame = -2

Query: 694 IYSRDTILHIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDV 515
           IYSRDTILHIQDKPALFR FFKWLKPGGKVLISDYCRSP TPS EF+ YIKQRGYDLHDV
Sbjct: 352 IYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAEFSEYIKQRGYDLHDV 411

Query: 514 KTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSA 335
           + YG+ML+DAGF DVIAEDRTDQF++VL+REL   EK KE F++DFS+EDYDDIV GW +
Sbjct: 412 QAYGQMLKDAGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSKEDYDDIVGGWKS 471

Query: 334 KLKRSSAGEQKWGLFIATK 278
           KL+R ++ EQKWGLFIA K
Sbjct: 472 KLERCASDEQKWGLFIANK 490



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>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score =  230 bits (586), Expect = 4e-60
 Identities = 105/139 (75%), Positives = 123/139 (88%)
 Frame = -2

Query: 694 IYSRDTILHIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDV 515
           IYSRDTILHIQDKPALFR F+KWLKPGGKVLI+DYCRSP TPS +FA YIK+RGYDLHDV
Sbjct: 351 IYSRDTILHIQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPSPDFAIYIKKRGYDLHDV 410

Query: 514 KTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSA 335
           + YG+ML DAGF +VIAEDRTDQF++VL+REL   EK KE F++DFS+EDY+DI+ GW +
Sbjct: 411 QAYGQMLRDAGFEEVIAEDRTDQFMKVLKRELDAVEKEKEEFISDFSKEDYEDIIGGWKS 470

Query: 334 KLKRSSAGEQKWGLFIATK 278
           KL RSS+GEQKWGLFIA +
Sbjct: 471 KLLRSSSGEQKWGLFIAKR 489



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>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score =  225 bits (574), Expect = 9e-59
 Identities = 105/139 (75%), Positives = 124/139 (89%)
 Frame = -2

Query: 694 IYSRDTILHIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDV 515
           IYSRDTILHIQDKPALFR+F KWLKPGGKVLISDYC+S GTPS EFAAYI+QRGYDLHDV
Sbjct: 355 IYSRDTILHIQDKPALFRSFHKWLKPGGKVLISDYCKSAGTPSAEFAAYIRQRGYDLHDV 414

Query: 514 KTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNGWSA 335
           K YGKML+DAGF +VIAE+RTDQF++VL++EL   E+ K+ F+ DFS+EDY+DIV+GW A
Sbjct: 415 KAYGKMLKDAGFVEVIAENRTDQFIQVLQKELDALEQEKDDFIDDFSEEDYNDIVDGWKA 474

Query: 334 KLKRSSAGEQKWGLFIATK 278
           KL R++ GEQ+WGLFIA K
Sbjct: 475 KLVRTTEGEQQWGLFIAKK 493



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>UBIE_SHEON (Q8E9R7) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKM-- 497
           ++ DK A  R+  + LKPGGK+L+ ++ +    P  E    + ++ YDL+  K   KM  
Sbjct: 145 NVTDKDAALRSMNRVLKPGGKLLVLEFSK----PQHE----VMRKVYDLYSFKVLPKMGQ 196

Query: 496 --LEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNG 344
              +DA  ++ +AE         +     +    +    A F Q DY ++ +G
Sbjct: 197 LITKDADSYEYLAES--------IRMHPDQDTLKQMMVDAGFEQVDYTNMTDG 241



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>UBIE_PHOLL (Q7MZ81) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKM-L 494
           ++ +K    R+ F+ LKPGG++L+ ++ +    P  +  AY     Y  H +   G++ +
Sbjct: 145 NVTEKEKALRSMFRVLKPGGRLLVLEFSKPLFAPLSK--AY---DAYSFHVLPKIGQVFV 199

Query: 493 EDAGFHDVIAE 461
           +DAG +  +AE
Sbjct: 200 QDAGSYRYLAE 210



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>TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine synthetase III)|
            [Includes: ATP-dependent asparagine adenylase (AsnA)
            (Asparagine activase); ATP-dependent glutamine adenylase
            (GlnA) (Glutamine activase); ATP-dependent tyrosine
            adenylase (TyrA) (Ty
          Length = 6486

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/88 (28%), Positives = 41/88 (46%)
 Frame = -2

Query: 625  LKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQ 446
            + P G   +  Y  S G  + E A  +++RGY + D+  +    +D      +AE   D 
Sbjct: 6303 IDPSGPYTLMGYS-SGGNLAFEVAKELEERGYGVTDIILFDSYWKDKAIERTVAETEND- 6360

Query: 445  FLRVLERELGETEKNKEAFLADFSQEDY 362
             +  L  E+GE   N E F  + +QED+
Sbjct: 6361 -IAQLFAEIGE---NTEMF--NMTQEDF 6382



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>GH317_ARATH (Q9FZ87) Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-)|
           (Auxin-responsive GH3-like protein 17) (AtGH3-17)
          Length = 609

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = -2

Query: 526 LHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDI 353
           L D+ T  + ++    H +++++   Q+LR      GE +KN+++F       +YDD+
Sbjct: 17  LEDLTTNAEAIQQQVLHQILSQNSGTQYLRAFLD--GEADKNQQSFKNKVPVVNYDDV 72



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>OS9_YARLI (Q6C3U1) Protein OS-9 homolog precursor|
          Length = 558

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 565 EEFAAYIKQRGYDLHDVKTYG-KMLEDAGFHDVIAEDRTDQFLRVLERELGETEK 404
           EE  A+ +++G D+ +++  G  ML+DAG  DV+A   TD+ ++ L +E  +++K
Sbjct: 385 EEKYAWWQEQG-DMSNLEIQGLTMLDDAGIEDVLAR-ATDEVMKQLNKEAKQSKK 437



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>EFG_LACLA (Q9CDG1) Elongation factor G (EF-G)|
          Length = 709

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 436 VLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKL 329
           + E  +G  E N E    DF+ E+Y ++ N W  KL
Sbjct: 194 IKETVVGSDEFNAELAALDFNAEEYTELANEWREKL 229



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>MRAW_CHLAB (Q5L6B5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 298

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 649 LFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRG 533
           L  +  +WL PGG+++I  +C S   P + F    ++ G
Sbjct: 224 LLESAMRWLAPGGRLIIISFCSSEDRPVKWFFREAEKSG 262



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>YAFE_ECOLI (P30866) Hypothetical protein yafE|
          Length = 207

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -2

Query: 694 IYSRDTILHIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDV 515
           + SR +  H  D  A  R   + LKPGG++++ D   SPG P  +      +   D   V
Sbjct: 65  VISRYSAHHWHDVGAALREVNRILKPGGRLIVMD-VMSPGHPVRDIWLQTVEALRDTSHV 123

Query: 514 KTY 506
           + Y
Sbjct: 124 RNY 126



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>UBIE_VIBVY (Q7MQ33) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 260

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAY 548
           ++ DK    R+ F+ LKPGG++L+ ++ +    P S+ + AY
Sbjct: 154 NVTDKDKALRSMFRVLKPGGRLLVLEFSKPVFDPLSKVYDAY 195



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>UBIE_VIBVU (Q8DDP9) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 260

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAY 548
           ++ DK    R+ F+ LKPGG++L+ ++ +    P S+ + AY
Sbjct: 154 NVTDKDKALRSMFRVLKPGGRLLVLEFSKPVFDPLSKVYDAY 195



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>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -2

Query: 586 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 413
           +S G P  S +  +  K R     D K+ G+   D    D I E R  +  R  ERE+ E
Sbjct: 618 KSKGEPVISVKATSRSKDRSSKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRE 677

Query: 412 TEKNKE 395
           TE+ +E
Sbjct: 678 TERRRE 683



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>UBIE_VIBPA (Q87TH4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 259

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTP-SEEFAAYI-----KQRGYDLHDVKT 509
           ++ DK    R+ F+ LKPGG++L+ ++ +    P S+ + AY      K      +D ++
Sbjct: 153 NVTDKDKALRSMFRVLKPGGRLLVLEFSKPVLEPLSKVYDAYSFHLLPKMGELVANDAES 212

Query: 508 YGKMLEDAGFH 476
           Y  + E    H
Sbjct: 213 YRYLAESIRMH 223



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>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase|
            CHD1)
          Length = 1468

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
 Frame = -2

Query: 562  EFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVI--AEDRTDQFLRVLERELGETEKNKEAF 389
            E +A +K    ++       K LED    DV+  AED       V   +LGE+    E F
Sbjct: 864  ELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDH------VTTPDLGESHLGGEEF 917

Query: 388  LADFSQEDY------DDIVNGWSAKLKRSSAGEQK 302
            L  F   DY      DDI+     +LK+    EQK
Sbjct: 918  LKQFEVTDYKADIDWDDIIP--EEELKKLQDEEQK 950



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>UBIE_VIBCH (Q9KVQ6) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 260

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML- 494
           ++ DK    R+ F+ LKPGG++L+ ++ +    P  +         Y  H +   G+++ 
Sbjct: 154 NVTDKDKALRSMFRVLKPGGRLLVLEFSKPILEPLSKL-----YDTYSFHILPKMGQLIA 208

Query: 493 EDAGFHDVIAE 461
            DA  +  +AE
Sbjct: 209 NDADSYRYLAE 219



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>KSGA_METKA (Q8TWU7) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 278

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -2

Query: 472 VIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVN 347
           VIA +   + + +L+RELGE   N E   ADF + D  D VN
Sbjct: 69  VIAVELDGRMVEILKRELGEA-PNLEIVRADFLEYDVPDDVN 109



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>UBIE_SALTY (P0A2K5) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML- 494
           ++ +K    R+ F+ LKPGG++L+ ++ +    P  +  AY     Y  H +   G M+ 
Sbjct: 145 NVTEKEKALRSMFRVLKPGGRLLVLEFSKPIIEPLSK--AY---DAYSFHILPRIGSMVA 199

Query: 493 EDAGFHDVIAE 461
            DA  +  +AE
Sbjct: 200 NDADSYRYLAE 210



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>UBIE_SALTI (P0A2K6) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML- 494
           ++ +K    R+ F+ LKPGG++L+ ++ +    P  +  AY     Y  H +   G M+ 
Sbjct: 145 NVTEKEKALRSMFRVLKPGGRLLVLEFSKPIIEPLSK--AY---DAYSFHILPRIGSMVA 199

Query: 493 EDAGFHDVIAE 461
            DA  +  +AE
Sbjct: 200 NDADSYRYLAE 210



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>UBIE_IDILO (Q5QYG2) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLE 491
           ++ DK    R+  + LKPGG+VLI ++       S+  +A + Q  YD +      KM  
Sbjct: 145 NVTDKDKALRSMLRVLKPGGRVLILEF-------SKPVSATLNQ-VYDFYSFNILPKM-- 194

Query: 490 DAGFHDVIAEDRTD-QFLRVLERELGETEKNKEAF-LADFSQEDYDDIVNG 344
                 V+A D    Q+L    R   + E  K     A + + DY ++  G
Sbjct: 195 ----GQVVANDSDSYQYLAESIRMHPDQETLKSMMEAAGYEKVDYQNMTGG 241



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>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -2

Query: 586 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 413
           +S G P  S +  +  K+R     D K+  K   D    D I E R  +  R  ERE+ E
Sbjct: 576 KSKGEPVISVKTTSRSKERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRE 635

Query: 412 TEKNKE 395
           TE+ +E
Sbjct: 636 TERRRE 641



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>UBIE_HAEDU (P59911) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 259

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEE------FAAYIKQRGYDLHDVKT 509
           ++ DK    ++ ++ LKPGG++L+ ++ +    P  +      F    K  G  ++D ++
Sbjct: 153 NVTDKDKALKSMYRVLKPGGRLLVLEFSKPIFDPISQLYNFYSFNILPKVGGIVVNDAES 212

Query: 508 YGKMLEDAGFH 476
           Y  + E    H
Sbjct: 213 YRYLAESIRMH 223



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>UBIG_XANAC (Q8PK00) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 239

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSP 578
           H+ D  A+ R     LKPGGK+ +S   R+P
Sbjct: 133 HVPDPTAIIRACASLLKPGGKLFLSTLNRTP 163



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>UBIE_YERPS (Q66FT0) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML- 494
           ++ +K    R+ F+ LKPGG++L+ ++ +    P  +  AY     Y  H +   G+++ 
Sbjct: 145 NVTEKEKALRSMFRVLKPGGRLLVLEFSKPLLEPLSK--AY---DAYSFHILPKIGELVA 199

Query: 493 EDAGFHDVIAE 461
           +DA  +  +AE
Sbjct: 200 QDAESYRYLAE 210



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>UBIE_YERPE (Q8D1I3) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 251

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -2

Query: 670 HIQDKPALFRNFFKWLKPGGKVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKML- 494
           ++ +K    R+ F+ LKPGG++L+ ++ +    P  +  AY     Y  H +   G+++ 
Sbjct: 145 NVTEKEKALRSMFRVLKPGGRLLVLEFSKPLLEPLSK--AY---DAYSFHILPKIGELVA 199

Query: 493 EDAGFHDVIAE 461
           +DA  +  +AE
Sbjct: 200 QDAESYRYLAE 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,047,530
Number of Sequences: 219361
Number of extensions: 1456788
Number of successful extensions: 5336
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5332
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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