ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LFTR_VIBCH (Q9KRA7) Leucyl/phenylalanyl-tRNA--protein transferas... 30 2.1

>LFTR_VIBCH (Q9KRA7) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)|
           (L/F-transferase) (Leucyltransferase)
           (Phenyalanyltransferase)
          Length = 243

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 55  KLYKCLVIKHHMGXITPRTRSIELYFFFFVLMLVKKHERLASHCYTTKWLAT 210
           +L  C V+  H+  +   T S E    F   +L  K +++ S C+ T+WLAT
Sbjct: 186 QLIDCQVMNPHLQSLGATTLSREQ---FIQSLLSFKEKQVLSGCFETQWLAT 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,240,913
Number of Sequences: 219361
Number of extensions: 363930
Number of successful extensions: 372
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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