| Clone Name | rbags29e09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ310166.3|LRI310166 Lolium rigidum mRNA for 5-enol-pyruvylshikimate-3-phosphate synthase homologue Length = 957 Score = 601 bits (303), Expect = e-168 Identities = 386/413 (93%), Gaps = 1/413 (0%) Strand = Plus / Minus Query: 280 agggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagc 339 ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 941 agggaaaaggccatggccatccggtggtcatcgtaggtgtcgatcgccgtgacgttcagc 882 Query: 340 ttctccggtggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagcttt 399 ||||| ||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 881 ttctctggtggtgtgataatgcagtagtccgggccttcctctaccgttgctcccagcttt 822 Query: 400 gtcagctcggtccggatcgcgaccattctttcggtttccttcactctccaggaggcaaca 459 || || || |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 821 gttagttccgtccggattgccaccattctctcggtttccttcactctccaggaggcaaca 762 Query: 460 tctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgaca 519 |||||||||||||||||||| |||||||| |||||||||||||| |||||||| || ||| Sbjct: 761 tctctgatagcagttggaccatcggcaaaaagggcaacaacggctagagtcatggcaaca 702 Query: 520 tcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggctga 579 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 701 tcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccgaagggctga 642 Query: 580 cgcggtggaccagtaacagttacact-agtgtcagtccatgtaacctttgctcccatcat 638 |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 641 cgcggtggaccagtaacagttacactaagtgtctgtccatgtaaccttcgctcccatcat 582 Query: 639 ttcaagtacctcancaaatttcacatcaccctgcaaactggtggtgccgnaac 691 ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 581 ttctagtacctcagcaaatttcacatcaccctgcaaactggtggtgccgcaac 529
>gb|DQ153168.1| Lolium multiflorum plastid 5-enolpyruvylshikimate 3-phosphate synthase mRNA, partial cds; nuclear gene for plastid product Length = 1205 Score = 581 bits (293), Expect = e-162 Identities = 375/403 (93%) Strand = Plus / Minus Query: 289 gccatcgccatccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggt 348 ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1204 gccatggccatgcggtgatcatcgtaggtgtcgatcgccgtgacgttcagcttctctggt 1145 Query: 349 ggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcg 408 |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| || || Sbjct: 1144 ggcgtgataatgcagtagtccgggccttcctctaccgttgctcccagctttgttagttcc 1085 Query: 409 gtccggatcgcgaccattctttcggtttccttcactctccaggaggcaacatctctgata 468 || | ||| || |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 gtgcagattgccaccattctctcggtttccttcactctccaggaggcaacatctctgata 1025 Query: 469 gcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcatt 528 ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 1024 gcagttggaccatcggcaaaaagggcaacaacggctagagtcatggcaacatcaggcatt 965 Query: 529 ttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtgga 588 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 964 ttgttcatgttgacatcaacagcttttaggtgtttccttccaaagggctgacgaggtgga 905 Query: 589 ccagtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacc 648 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 904 ccagtaacagttacactagtgtcggtccatgtaaccttcgctcccatcatttctagtacc 845 Query: 649 tcancaaatttcacatcaccctgcaaactggtggtgccgnaac 691 ||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 844 tcagcaaatttcacatcaccctgcaaactggtggtgccgcaac 802
>gb|AF349754.1| Lolium rigidum 5-enolpyruvylshikimate 3-phosphate synthase (epsp-s) mRNA, epsp-s-S allele, partial cds Length = 1041 Score = 577 bits (291), Expect = e-161 Identities = 370/403 (91%) Strand = Plus / Minus Query: 289 gccatcgccatccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggt 348 ||||| ||||| ||||| || ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1040 gccatggccatgcggtgrtcrtcgtaggtgtcgatcgccgtgacrttcagcttctctggt 981 Query: 349 ggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcg 408 |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| || || Sbjct: 980 ggcgtgataatgcagtagtccgggccttcctctaccgttgctcccagctttgttagytcc 921 Query: 409 gtccggatcgcgaccattctttcggtttccttcactctccaggaggcaacatctctgata 468 || | ||| || |||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 920 gtgcagattgccaccattctctcggtttccttcactctccaggacgcaacatctctgata 861 Query: 469 gcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcatt 528 ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 860 gcagttggaccatcggcaaaaagggcaacaacggcwagagtcatggcaacatcaggcatt 801 Query: 529 ttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtgga 588 ||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||| Sbjct: 800 ttgttcatgttgacatcaacagcyttwaggtgtttccttccaaagggctgacgmggtgga 741 Query: 589 ccagtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacc 648 ||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 740 ccagtaacagttacactagtgtcggtccatgtaacyttcgctcccatcatttctagtacc 681 Query: 649 tcancaaatttcacatcaccctgcaaactggtggtgccgnaac 691 ||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 680 tcagcaaatttcacatcaccctgcaaactggtggtgccgcaac 638
>ref|XM_550613.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 569 bits (287), Expect = e-159 Identities = 448/502 (89%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1546 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 1487 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 1486 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 1427 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1426 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 1367 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatcg 418 |||||||||| || ||||| || |||| ||||||||||||||| ||||||||||| || | Sbjct: 1366 tgcagtagtcaggaccttcttcaaccgatgctcccagctttgttagctcggtccgaattg 1307 Query: 419 cgaccattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggac 478 | ||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 1306 caaccatcctttcggtttcctttactctccaggaagccacatctctgatagcagttggac 1247 Query: 479 cgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgt 538 | || || || || |||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1246 catcagcgaagagtgcaacaacggcaagggtcatggcaacatcaggcattttgttcatgt 1187 Query: 539 tgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacag 598 |||||||||||||||| ||||||||| | ||| | |||| ||| ||||||||||| || | Sbjct: 1186 tgacatcaacagctttcaggtgtttcttcccataaggctcacgtggtggaccagttacgg 1127 Query: 599 ttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatt 658 ||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 1126 ttacactggtgtcagtccatgtaacctttgctcccatcatctcaagtacctcagcaaatt 1067 Query: 659 tcacatcaccctgcaaactggt 680 | |||||||||||||||||||| Sbjct: 1066 tgacatcaccctgcaaactggt 1045
>gb|AF413082.1|AF413082 Oryza sativa EPSP synthase mRNA, complete cds Length = 1585 Score = 569 bits (287), Expect = e-159 Identities = 448/502 (89%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1546 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 1487 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 1486 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 1427 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1426 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 1367 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatcg 418 |||||||||| || ||||| || |||| ||||||||||||||| ||||||||||| || | Sbjct: 1366 tgcagtagtcaggaccttcttcaaccgatgctcccagctttgttagctcggtccgaattg 1307 Query: 419 cgaccattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggac 478 | ||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 1306 caaccatcctttcggtttcctttactctccaggaagccacatctctgatagcagttggac 1247 Query: 479 cgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgt 538 | || || || || |||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1246 catcagcgaagagtgcaacaacggcaagggtcatggcaacatcaggcattttgttcatgt 1187 Query: 539 tgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacag 598 |||||||||||||||| ||||||||| | ||| | |||| ||| ||||||||||| || | Sbjct: 1186 tgacatcaacagctttcaggtgtttcttcccataaggctcacgtggtggaccagttacgg 1127 Query: 599 ttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatt 658 ||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 1126 ttacactggtgtcagtccatgtaacctttgctcccatcatctcaagtacctcagcaaatt 1067 Query: 659 tcacatcaccctgcaaactggt 680 | |||||||||||||||||||| Sbjct: 1066 tgacatcaccctgcaaactggt 1045
>dbj|AB016765.1| Oryza sativa (japonica cultivar-group) mRNA for 3-phosphoshikimate 1-carboxyvinyltransferase, complete cds Length = 1551 Score = 569 bits (287), Expect = e-159 Identities = 448/502 (89%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1303 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 1244 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 1243 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 1184 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1183 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 1124 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatcg 418 |||||||||| || ||||| || |||| ||||||||||||||| ||||||||||| || | Sbjct: 1123 tgcagtagtcaggaccttcttcaaccgatgctcccagctttgttagctcggtccgaattg 1064 Query: 419 cgaccattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggac 478 | ||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 1063 caaccatcctttcggtttcctttactctccaggaagccacatctctgatagcagttggac 1004 Query: 479 cgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgt 538 | || || || || |||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1003 catcagcgaagagtgcaacaacggcaagggtcatggcaacatcaggcattttgttcatgt 944 Query: 539 tgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacag 598 |||||||||||||||| ||||||||| | ||| | |||| ||| ||||||||||| || | Sbjct: 943 tgacatcaacagctttcaggtgtttcttcccataaggctcacgtggtggaccagttacgg 884 Query: 599 ttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatt 658 ||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 883 ttacactggtgtcagtccatgtaacctttgctcccatcatctcaagtacctcagcaaatt 824 Query: 659 tcacatcaccctgcaaactggt 680 | |||||||||||||||||||| Sbjct: 823 tgacatcaccctgcaaactggt 802
>emb|AJ417034.1|EIN417034 Eleusine indica plastid partial mRNA for 5-enolpyruvylshikimate-3-phosphate synthase (epsps-S gene) Length = 1338 Score = 535 bits (270), Expect = e-149 Identities = 449/509 (88%) Strand = Plus / Minus Query: 178 tagttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcac 237 ||||||||||| || ||||| || ||||||||||||| ||||||||||| |||||||| Sbjct: 1337 tagttcttgacgaaagtgctcagcacgtcgaagtagtctgggaaggtcttgcgggtgcag 1278 Query: 238 ccggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcc 297 |||||||||| ||||||||| ||||| || |||||||| || |||||||||||||| ||| Sbjct: 1277 ccggggtcccggatggtcacaggcacgtcggcgcaggcggcgagggagaaggccatggcc 1218 Query: 298 atccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatg 357 |||| |||||| |||||||||||||| ||||| |||||||||||||| || || ||||| Sbjct: 1217 atcctgtggtcatcgtaggtgtcgatggccgttacgttcagcttctcgggcggtgtgata 1158 Query: 358 atgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatc 417 ||||||||||| || |||||||| |||| |||||||||||||| ||||| |||||||| Sbjct: 1157 atgcagtagtccggtccttcctcgaccgacgctcccagctttgttagctcagtccggatt 1098 Query: 418 gcgaccattctttcggtttccttcactctccaggaggcaacatctctgatagcagttgga 477 || ||||| || ||||| ||||| ||||||||||| || |||||||||||||||||||| Sbjct: 1097 gcaaccatcctctcggtctcctttactctccaggaagccacatctctgatagcagttggg 1038 Query: 478 ccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatg 537 || || ||||| |||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 1037 ccatcagcaaatagggcaaccacggcaagagtcatggcgacatcgggcattttgttcatg 978 Query: 538 ttgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaaca 597 || ||||||| |||||||||||||||||| |||||||||| ||| ||||||| |||||| Sbjct: 977 ttaacatcaatagcttttaggtgtttcctcccaaatggctcacgttgtggaccggtaaca 918 Query: 598 gttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaat 657 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| Sbjct: 917 gttacgctagtttcagtccatgtaaccttcgctcccatcatctcgagtacctcggcaaat 858 Query: 658 ttcacatcaccctgcaaactggtggtgcc 686 |||||||||||||||| |||||||||||| Sbjct: 857 ttcacatcaccctgcagactggtggtgcc 829
>emb|AJ417033.1|EIN417033 Eleusine indica plastid partial mRNA for 5-enolpyruvylshikimate-3-phosphate synthase (epsps-R gene) Length = 1338 Score = 527 bits (266), Expect = e-146 Identities = 448/509 (88%) Strand = Plus / Minus Query: 178 tagttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcac 237 ||||||||||| || ||||| || ||||||||||||| ||||||||||| |||||||| Sbjct: 1337 tagttcttgacgaaagtgctcagcacgtcgaagtagtctgggaaggtcttgcgggtgcag 1278 Query: 238 ccggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcc 297 |||||||||| ||||||||| ||||| || |||||||| || |||||||||||||| ||| Sbjct: 1277 ccggggtcccggatggtcacaggcacgtcggcgcaggcggcgagggagaaggccatggcc 1218 Query: 298 atccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatg 357 |||| |||||| |||||||||||||| ||||| |||||||||||||| || || ||||| Sbjct: 1217 atcctgtggtcatcgtaggtgtcgatggccgttacgttcagcttctcgggcggtgtgata 1158 Query: 358 atgcagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatc 417 ||||||||||| | |||||||| |||| |||||||||||||| ||||| |||||||| Sbjct: 1157 atgcagtagtccagtccttcctcgaccgacgctcccagctttgttagctcagtccggatt 1098 Query: 418 gcgaccattctttcggtttccttcactctccaggaggcaacatctctgatagcagttgga 477 || ||||| || ||||| ||||| ||||||||||| || |||||||||||||||||||| Sbjct: 1097 gcaaccatcctctcggtctcctttactctccaggaagccacatctctgatagcagttggg 1038 Query: 478 ccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatg 537 || || ||||| |||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 1037 ccatcagcaaatagggcaaccacggcaagagtcatggcgacatcgggcattttgttcatg 978 Query: 538 ttgacatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaaca 597 || ||||||| |||||||||||||||||| |||||||||| ||| ||||||| |||||| Sbjct: 977 ttaacatcaatagcttttaggtgtttcctcccaaatggctcacgttgtggaccggtaaca 918 Query: 598 gttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaat 657 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| Sbjct: 917 gttacgctagtttcagtccatgtaaccttcgctcccatcatctcgagtacctcggcaaat 858 Query: 658 ttcacatcaccctgcaaactggtggtgcc 686 |||||||||||||||| |||||||||||| Sbjct: 857 ttcacatcaccctgcagactggtggtgcc 829
>gb|AY106729.1| Zea mays PCO094563 mRNA sequence Length = 1443 Score = 513 bits (259), Expect = e-142 Identities = 444/506 (87%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 1206 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 1147 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1146 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 1087 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1086 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 1027 Query: 361 cagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatcgcg 420 |||||||| || |||||||| || | |||||||||||| || ||||| ||||||||||| Sbjct: 1026 cagtagtccggcccttcctcaacagatgctcccagcttggttagctccgtccggatcgca 967 Query: 421 accattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccg 480 ||||| || ||||| ||||| ||||||||||| || || |||||||| || || || || Sbjct: 966 accatcctctcggtctcctttactctccaggaagccacgtctctgatggctgtcgggcca 907 Query: 481 tcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttg 540 |||||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 906 tcggcaaagagggcaaccacagcaagagtcatggcgacatcaggcatcttgttcatgttg 847 Query: 541 acatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacagtt 600 ||||||| || || ||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 846 acatcaatcgccttgaggtgtttcctcccaaatggctcccgcggtgggccagtaacagtt 787 Query: 601 acactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatttc 660 || ||||| || |||||||||||||| ||||||||||| || ||||||||| |||| ||| Sbjct: 786 acgctagtctcggtccatgtaaccttcgctcccatcatctccagtacctcagcaaacttc 727 Query: 661 acatcaccctgcaaactggtggtgcc 686 |||||||||||||||||||||||||| Sbjct: 726 acatcaccctgcaaactggtggtgcc 701
>emb|X63374.1|ZMEPSPS Z.mays mRNA for EPSP-synthase Length = 1335 Score = 505 bits (255), Expect = e-140 Identities = 443/506 (87%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 1331 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 1272 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| |||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1271 gggtcccggatggtgacggggacctcggcacaggcggcaagggagaaggccatggccatc 1212 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1211 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 1152 Query: 361 cagtagtctgggccttcctccaccgttgctcccagctttgtcagctcggtccggatcgcg 420 |||||||| || |||||||| || | |||||||||||| || ||||| ||||||||||| Sbjct: 1151 cagtagtccggcccttcctcaacagatgctcccagcttggttagctccgtccggatcgca 1092 Query: 421 accattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccg 480 ||||| || ||||| ||||| ||||||||||| || || |||||||| || || || || Sbjct: 1091 accatcctctcggtctcctttactctccaggaagccacgtctctgatggctgtcgggcca 1032 Query: 481 tcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttg 540 |||||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 1031 tcggcaaagagggcaaccacagcaagagtcatggcgacatcaggcatcttgttcatgttg 972 Query: 541 acatcaacagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacagtt 600 ||||||| || || ||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 971 acatcaatcgccttgaggtgtttcctcccaaatggctcccgcggtgggccagtaacagtt 912 Query: 601 acactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatttc 660 || ||||| || |||||||||||||| ||||||||||| || ||||||||| |||| ||| Sbjct: 911 acgctagtctcggtccatgtaaccttcgctcccatcatctccagtacctcagcaaacttc 852 Query: 661 acatcaccctgcaaactggtggtgcc 686 |||||||||||||||||||||||||| Sbjct: 851 acatcaccctgcaaactggtggtgcc 826
>gb|AY324880.1| Oryza sativa (japonica cultivar-group) putative EPSP1 mRNA, partial cds Length = 1138 Score = 323 bits (163), Expect = 4e-85 Identities = 255/285 (89%), Gaps = 2/285 (0%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccaggaggc 455 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| || Sbjct: 1017 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccaggaagc 958 Query: 456 aacatctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgc 515 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || Sbjct: 957 --catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggc 900 Query: 516 gacatcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatgg 575 |||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | || Sbjct: 899 aacatcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataagg 840 Query: 576 ctgacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccat 635 || ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||| Sbjct: 839 ctcacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccat 780 Query: 636 catttcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||| |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 779 catctcaagtacctcagcaaatttgacatcaccctgcaaactggt 735
>gb|AY157643.1| Eleusine indica 5-enolpyruvylshikimate-3-phosphate synthase (epsps-R) gene, partial cds; nuclear gene for plastid product Length = 3079 Score = 266 bits (134), Expect = 9e-68 Identities = 196/217 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 ||||||||||||||||||| || || ||||| |||||||| |||||||||||||| |||| Sbjct: 2594 catctctgatagcagttgggccatcagcaaatagggcaaccacggcaagagtcatggcga 2535 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| Sbjct: 2534 catcgggcattttgttcatgttaacatcaatagcttttaggtgtttcctcccaaatggct 2475 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 2474 cacgttgtggaccggtaacagttacgctagtttcagtccatgtaaccttcgctcccatca 2415 Query: 638 tttcaagtacctcancaaatttcacatcaccctgcaa 674 | || |||||||| |||||||||||||||||||||| Sbjct: 2414 tctcgagtacctcggcaaatttcacatcaccctgcaa 2378 Score = 206 bits (104), Expect = 7e-50 Identities = 191/220 (86%) Strand = Plus / Minus Query: 178 tagttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcac 237 ||||||||||| || ||||| || ||||||||||||| ||||||||||| |||||||| Sbjct: 3078 tagttcttgacgaaagtgctcagcacgtcgaagtagtctgggaaggtcttgcgggtgcag 3019 Query: 238 ccggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcc 297 |||||||||| ||||||||| ||||| || |||||||| || |||||||||||||| ||| Sbjct: 3018 ccggggtcccggatggtcacaggcacgtcggcgcaggcggcgagggagaaggccatggcc 2959 Query: 298 atccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatg 357 |||| |||||| |||||||||||||| ||||| |||||||||||||| || || ||||| Sbjct: 2958 atcctgtggtcatcgtaggtgtcgatggccgttacgttcagcttctcgggcggtgtgata 2899 Query: 358 atgcagtagtctgggccttcctccaccgttgctcccagct 397 ||||||||||| | |||||||| |||| |||||||||| Sbjct: 2898 atgcagtagtccagtccttcctcgaccgacgctcccagct 2859 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||| |||||||| || ||||| || ||||| ||||| ||||||||||| Sbjct: 2744 ctttgttagctcagtccggattgcaaccatcctctcggtctcctttactctccagga 2688
>gb|AY157642.1| Eleusine indica 5-enolpyruvylshikimate-3-phosphate synthase (epsps-S) gene, partial cds; nuclear gene for plastid product Length = 3115 Score = 266 bits (134), Expect = 9e-68 Identities = 196/217 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 ||||||||||||||||||| || || ||||| |||||||| |||||||||||||| |||| Sbjct: 2630 catctctgatagcagttgggccatcagcaaatagggcaaccacggcaagagtcatggcga 2571 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| Sbjct: 2570 catcgggcattttgttcatgttaacatcaatagcttttaggtgtttcctcccaaatggct 2511 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 2510 cacgttgtggaccggtaacagttacgctagtttcagtccatgtaaccttcgctcccatca 2451 Query: 638 tttcaagtacctcancaaatttcacatcaccctgcaa 674 | || |||||||| |||||||||||||||||||||| Sbjct: 2450 tctcgagtacctcggcaaatttcacatcaccctgcaa 2414 Score = 214 bits (108), Expect = 3e-52 Identities = 192/220 (87%) Strand = Plus / Minus Query: 178 tagttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcac 237 ||||||||||| || ||||| || ||||||||||||| ||||||||||| |||||||| Sbjct: 3114 tagttcttgacgaaagtgctcagcacgtcgaagtagtctgggaaggtcttgcgggtgcag 3055 Query: 238 ccggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcc 297 |||||||||| ||||||||| ||||| || |||||||| || |||||||||||||| ||| Sbjct: 3054 ccggggtcccggatggtcacaggcacgtcggcgcaggcggcgagggagaaggccatggcc 2995 Query: 298 atccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatg 357 |||| |||||| |||||||||||||| ||||| |||||||||||||| || || ||||| Sbjct: 2994 atcctgtggtcatcgtaggtgtcgatggccgttacgttcagcttctcgggcggtgtgata 2935 Query: 358 atgcagtagtctgggccttcctccaccgttgctcccagct 397 ||||||||||| || |||||||| |||| |||||||||| Sbjct: 2934 atgcagtagtccggtccttcctcgaccgacgctcccagct 2895 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||| |||||||| || ||||| || ||||| ||||| ||||||||||| Sbjct: 2780 ctttgttagctcagtccggattgcaaccatcctctcggtctcctttactctccagga 2724
>gb|AF413081.1|AF413081 Oryza sativa 5-enolpyruvylshikimate 3-phosphate synthase gene, complete cds Length = 3661 Score = 260 bits (131), Expect = 5e-66 Identities = 193/214 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 2995 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 2936 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 2935 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 2876 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2875 cacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccatca 2816 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 2815 tctcaagtacctcagcaaatttgacatcaccctg 2782 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 3622 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 3563 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 3562 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 3503 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 3502 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 3443 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 3442 tgcagtagtcaggaccttcttcaaccgatgctcccagct 3404 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 3294 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 3238
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 260 bits (131), Expect = 5e-66 Identities = 193/214 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 1817895 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 1817836 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 1817835 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 1817776 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1817775 cacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccatca 1817716 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 1817715 tctcaagtacctcagcaaatttgacatcaccctg 1817682 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1818522 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 1818463 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 1818462 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 1818403 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1818402 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 1818343 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 1818342 tgcagtagtcaggaccttcttcaaccgatgctcccagct 1818304 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 1818194 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 1818138
>dbj|AB124892.1| Oryza punctata EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1514 Length = 3220 Score = 260 bits (131), Expect = 5e-66 Identities = 197/219 (89%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 |||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 617 agttcttgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 558 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 ||||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 557 cggggtccctgatcgtcacgggcacgtcggcgcaggcggcgagggagaaggccatggcca 498 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| |||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 497 tcctgtggtcatcgtaggtgtcgattgccgtgacattcagcttctccggtggggtgatga 438 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 ||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 437 tgcagtagtctggcccttcttcaaccgatgcacccagct 399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| || || ||||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 295 ctttgttagttcagtccgaattgcgaccatcctttcggtttcctttactctccagga 239
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 260 bits (131), Expect = 5e-66 Identities = 193/214 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 18373 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 18314 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 18313 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 18254 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 18253 cacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccatca 18194 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 18193 tctcaagtacctcagcaaatttgacatcaccctg 18160 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 19000 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 18941 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 18940 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 18881 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 18880 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 18821 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 18820 tgcagtagtcaggaccttcttcaaccgatgctcccagct 18782 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 18672 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 18616
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 260 bits (131), Expect = 5e-66 Identities = 193/214 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 143044 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 142985 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 142984 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 142925 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 142924 cacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccatca 142865 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 142864 tctcaagtacctcagcaaatttgacatcaccctg 142831 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 143671 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 143612 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 143611 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 143552 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 143551 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 143492 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 143491 tgcagtagtcaggaccttcttcaaccgatgctcccagct 143453 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 143343 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 143287
>dbj|AB052962.1| Oryza sativa EPSPs, rps20 genes for 3-phosphoshikimate 1-carboxyvinyltransferase, 40S ribosomal protein S20, complete cds Length = 10601 Score = 260 bits (131), Expect = 5e-66 Identities = 193/214 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 5994 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 5935 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 5934 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 5875 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 5874 cacgtggtggaccagttacggttacactggtgtcagtccatgtaacctttgctcccatca 5815 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 5814 tctcaagtacctcagcaaatttgacatcaccctg 5781 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 6621 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 6562 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 6561 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 6502 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 6501 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 6442 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 6441 tgcagtagtcaggaccttcttcaaccgatgctcccagct 6403 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 6293 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 6237
>dbj|AK106717.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G01, full insert sequence Length = 2114 Score = 252 bits (127), Expect = 1e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||||||||||||||| || || || || |||||||||||||| ||||| || | Sbjct: 1685 catctctgatagcagttggaccatcagcgaagagtgcaacaacggcaagggtcatggcaa 1744 Query: 518 catcaggcattttgttcatgttgacatcaacagcttttaggtgtttccttccaaatggct 577 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||| Sbjct: 1745 catcaggcattttgttcatgttgacatcaacagctttcaggtgtttcttcccataaggct 1804 Query: 578 gacgcggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatca 637 ||| ||||||||||| || |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1805 cacgtggtggaccagttacggttacactggtgtctgtccatgtaacctttgctcccatca 1864 Query: 638 tttcaagtacctcancaaatttcacatcaccctg 671 | |||||||||||| ||||||| ||||||||||| Sbjct: 1865 tctcaagtacctcagcaaatttgacatcaccctg 1898 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Plus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1058 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 1117 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 1118 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 1177 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1178 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 1237 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || || | ||||||||||| Sbjct: 1238 tgcagtagtcaggaccttcttcaactgatgctcccagct 1276 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 1386 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 1442
>dbj|AB124893.1| Oryza officinalis EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1272 Length = 3069 Score = 244 bits (123), Expect = 3e-61 Identities = 195/219 (89%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 |||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 614 agttcttgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcatc 555 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 |||||||| |||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 554 cggggtccttgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 495 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| |||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 494 tcctgtggtcatcgtaggtgtcgattgccgtgacattcagcttctccggtggggtgatga 435 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||| ||||||| Sbjct: 434 tgcagtagtccggcccttcttcaaccgatgcacccagct 396 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||| ||||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 294 ctttgttagctcagtccgaattgcgaccatcctttcggtttcctttactctccagga 238
>dbj|AB124891.1| Oryza longistaminata EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1422 Length = 3045 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 635 agttcctgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 576 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||| ||||| |||| Sbjct: 575 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaagccatggcca 516 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| |||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 515 tcctgtggtcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 456 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 455 tgcagtagtcaggtccttcttcaaccgatgctcccagct 417 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 307 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 251
>dbj|AB124890.1| Oryza longistaminata EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1034 Length = 2888 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 595 agttcctgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 536 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 535 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 476 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 475 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 416 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 415 tgcagtagtcaggaccttcttcaaccgatgctcccagct 377 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 267 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 211
>dbj|AB124889.1| Oryza meridionalis EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences Length = 2902 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 624 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 565 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 564 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 505 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 504 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 445 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 444 tgcagtagtcaggaccttcttcaaccgatgctcccagct 406 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>dbj|AB124888.1| Oryza glumipatula EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1185 Length = 3003 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 635 agttcctgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 576 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 575 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 516 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 515 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 456 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 455 tgcagtagtcaggaccttcttcaaccgatgctcccagct 417 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 307 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 251
>dbj|AB124887.1| Oryza barthii EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W159b-2 Length = 2960 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggaaaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| |||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtggtcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttaccctccagga 243
>dbj|AB124886.1| Oryza glaberrima EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W025 Length = 2961 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagcacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || ||||| |||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggaaaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| |||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtggtcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttaccctccagga 243
>dbj|AB124885.1| Oryza rufipogon EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W1945 Length = 2906 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>dbj|AB124884.1| Oryza rufipogon EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W107 Length = 2901 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>dbj|AB124883.1| Oryza sativa (indica cultivar-group) EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:PTB10 Length = 2903 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>dbj|AB124882.1| Oryza sativa (japonica cultivar-group) EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:T65wx Length = 2899 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>dbj|AB124881.1| Oryza sativa (japonica cultivar-group) EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:Shimokita Length = 2899 Score = 236 bits (119), Expect = 8e-59 Identities = 194/219 (88%) Strand = Plus / Minus Query: 179 agttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacc 238 ||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 627 agttcctgacgaaagtgcttagaacgtcgaagtagttggggaaggtcttgcgggtgcaac 568 Query: 239 cggggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgcca 298 | ||||||||||| ||||| ||||| || |||||||| || |||||||||||||| |||| Sbjct: 567 cagggtccctgatcgtcacgggcacgtcggcgcaggcagcgagggagaaggccatggcca 508 Query: 299 tccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 ||| ||| || |||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 507 tcctgtgatcatcgtaggtgtcgattgccgtgatgttcagcttctccggtggggtgatga 448 Query: 359 tgcagtagtctgggccttcctccaccgttgctcccagct 397 |||||||||| || ||||| || |||| ||||||||||| Sbjct: 447 tgcagtagtcaggaccttcttcaaccgatgctcccagct 409 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 396 ctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctccagga 452 |||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||| Sbjct: 299 ctttgttagctcggtccgaattgcaaccatcctttcggtttcctttactctccagga 243
>gb|AF496785.1| Zea mays cultivar D_7 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 202 bits (102), Expect = 1e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496789.1| Zea mays cultivar D_9 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496784.1| Zea mays cultivar TX601 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496782.1| Zea mays cultivar H60 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496779.1| Zea mays cultivar D71-4HT 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496778.1| Zea mays cultivar IVANA 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496775.1| Zea mays cultivar B73 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496771.1| Zea mays cultivar H_4 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496770.1| Zea mays cultivar F_4 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496768.1| Zea mays cultivar F_5 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496766.1| Zea mays cultivar J40 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496765.1| Zea mays cultivar 647 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 200 bits (101), Expect = 4e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496788.1| Zea mays cultivar D_6 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496787.1| Zea mays cultivar F_1 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496786.1| Zea mays cultivar Mo17 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| |||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggtgacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496783.1| Zea mays cultivar B84 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496781.1| Zea mays cultivar DE811 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| |||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggtgacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496777.1| Zea mays cultivar CO109 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 266 Score = 194 bits (98), Expect = 3e-46 Identities = 161/182 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 182 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 123 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 122 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 63 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 3 Query: 361 ca 362 || Sbjct: 2 ca 1
>gb|AF496774.1| Zea mays cultivar F_2 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 262 Score = 194 bits (98), Expect = 3e-46 Identities = 158/178 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 178 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 119 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 118 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 59 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 58 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatga 1
>gb|AF496773.1| Zea mays cultivar G_1 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 262 Score = 194 bits (98), Expect = 3e-46 Identities = 158/178 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 178 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 119 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 118 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 59 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 58 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatga 1
>gb|AF496762.1| Zea mays cultivar C_5 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 262 Score = 194 bits (98), Expect = 3e-46 Identities = 158/178 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 178 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 119 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 118 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 59 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 58 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatga 1
>gb|AF496769.1| Zea mays cultivar F_3 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 265 Score = 192 bits (97), Expect = 1e-45 Identities = 160/181 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 181 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 122 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 121 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 62 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatg 360 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 61 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgatg 2 Query: 361 c 361 | Sbjct: 1 c 1
>gb|AF496780.1| Zea mays cultivar 684 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 260 Score = 190 bits (96), Expect = 4e-45 Identities = 156/176 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 176 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 117 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 116 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 57 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgat 356 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 56 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgat 1
>gb|AF496772.1| Zea mays cultivar B_6 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 260 Score = 190 bits (96), Expect = 4e-45 Identities = 156/176 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 176 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 117 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 116 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 57 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgat 356 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 56 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgat 1
>gb|AF496763.1| Zea mays cultivar F_6 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 263 Score = 188 bits (95), Expect = 2e-44 Identities = 158/179 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 179 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 120 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| |||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 119 gggtcccggatggtgacggggacctcggcacaggcggcaagggagaaggccatggccatc 60 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgat 359 | |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 59 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatgat 1
>gb|AF496764.1| Zea mays cultivar B_1 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 262 Score = 186 bits (94), Expect = 7e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 178 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 119 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| |||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 118 gggtcccggatggtgacggggacctcggcacaggcggcaagggagaaggccatggccatc 59 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgatga 358 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 58 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgatga 1
>gb|AF496790.1| Zea mays cultivar C_9 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 256 Score = 182 bits (92), Expect = 1e-42 Identities = 152/172 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 172 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 113 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 112 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 53 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcg 352 | |||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 52 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcg 1
>gb|AF496776.1| Zea mays cultivar I_1 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 260 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 176 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 117 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 116 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 57 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtgat 356 | |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 56 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtgat 1
>gb|AF496761.1| Zea mays cultivar H_1 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 259 Score = 180 bits (91), Expect = 4e-42 Identities = 154/175 (88%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 175 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 116 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||| ||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 115 gggtcccggatggccacggggacctcggcacaggcggcaagggagaaggccatggccatc 56 Query: 301 cggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttctccggtggcgtga 355 | |||||||||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 55 ctgtggtcgtcgtacgtgtcgatcgccgtcacgttcagcttctccggcggcgtga 1
>emb|AJ495777.1|HVU495777 Hordeum vulgare partial mRNA for EPSP-synthase, 3' UTR Length = 217 Score = 167 bits (84), Expect = 6e-38 Identities = 98/100 (98%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 1 aaaaaacgaatacagtgcgcaatacatttncattttacatncaaggccaacgcactacaa 60 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 175 aaaaaacgaatacagtgcgcaatacattt-cattttacat-caaggccaacgcactacaa 118 Query: 61 aactaatattaaagactcatacaccatctcgcgagaagac 100 |||||||||||||||||||||||||||||||||||||||| Sbjct: 117 aactaatattaaagactcatacaccatctcgcgagaagac 78 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 116 tcctcataccatggacaggggctacagaagtacaagcgcaattcgccgtagattctccga 175 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 tcctcataccatggacagaggctacagaagtacaagcgcaattcgccgtagattctccga 3 Query: 176 tc 177 || Sbjct: 2 tc 1
>gb|AY639815.1| Camptotheca acuminata 5-enolpyruvylshikimate 3-phosphate synthase (EPSPS) mRNA, complete cds Length = 1748 Score = 153 bits (77), Expect = 9e-34 Identities = 208/252 (82%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| |||||||||||||||||| || || ||||| |||||||| ||||| || ||| Sbjct: 1454 ctttctgtttccttcactctccagctagccacgtctcttatagcagtgggaccatcagca 1395 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || ||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1394 aaaagggcaacaacagcaagagtcatggcaacatcaggcattttgttcatattgacatca 1335 Query: 547 acagcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacagttacacta 606 ||||| ||||||||||||||| | | | || ||||| || || || |||||||| Sbjct: 1334 acagcacgcaggtgtttccttccagaagaattgcggggtggtcctgtgacggttacactg 1275 Query: 607 gtgtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatttcacatca 666 | || ||||| ||||| ||||||||||| ||||||| ||||| ||||||| ||||| Sbjct: 1274 ttttctgtccaggtaacttttgctcccattttttcaagaacctcggcaaatttaacatct 1215 Query: 667 ccctgcaaactg 678 ||||| |||||| Sbjct: 1214 ccctgtaaactg 1203
>gb|AY545656.1| Acorus gramineus 5-enol-pyruvylshikimate-phosphate synthase-like (EPSPS1) mRNA, partial sequence Length = 930 Score = 149 bits (75), Expect = 1e-32 Identities = 193/231 (83%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 316 gtgtcgatcgccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctggg-cc 374 |||||||||| || |||||||| ||||||||||| | |||||||||||||||| || || Sbjct: 930 gtgtcgatcgatgtcacgttcagtttctccggtggggcgatgatgcagtagtcttggtcc 871 Query: 375 ttcctccaccgttgctcccagctttgtcagctcggtccggatcgcgaccattctttcggt 434 |||||||| ||||| ||||||||| | ||||| || | ||| || | ||||||||| || Sbjct: 870 ctcctccacagttgcccccagctttctgagctctgtgcagatggctatcattctttcagt 811 Query: 435 ttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagggc 494 || || |||||||| || || |||||||| || |||||||| || ||||| || || || Sbjct: 810 ctcttttactctccaagacgccacatctcttatggcagttgggccatcggcgaagagagc 751 Query: 495 aacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatc 545 |||||| || |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 750 aacaacagccagagtcatggctacatccggcattttgttcatgttgacatc 700
>gb|AF496767.1| Zea mays cultivar H_5 3-phosphoshikimate 1-carboxyvinyltransferase gene, 3'UTR and partial cds Length = 226 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 181 ttcttgacaaatgtgcttaggacgtcgaagtagttggggaaggtctttcgggtgcacccg 240 |||||||| || ||||| || || |||||||||| |||||||||||| ||||||||||| Sbjct: 142 ttcttgacgaaagtgctcagcacatcgaagtagtcggggaaggtcttccgggtgcaccca 83 Query: 241 gggtccctgatggtcactggcacctcagcgcaggccgccagggagaaggccatcgccatc 300 ||||||| ||||||||| || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 82 gggtcccggatggtcacggggacctcggcacaggcggcaagggagaaggccatggccatc 23 Query: 301 cggtggtcgtcgtaggtgtcga 322 | |||||||||||| ||||||| Sbjct: 22 ctgtggtcgtcgtacgtgtcga 1
>gb|AF371966.1| Dicliptera chinensis 5-enolpyruvylshikimate-3-phosphate synthase B mRNA, complete cds; nuclear gene for plastid product Length = 1891 Score = 129 bits (65), Expect = 1e-26 Identities = 278/349 (79%) Strand = Plus / Minus Query: 199 aggacgtcgaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcact 258 |||||||| |||||||| |||||||| || |||||||| || || || |||| || || Sbjct: 1695 aggacgtcaaagtagttagggaaggttttacgggtgcagccaggatctttgattgtgaca 1636 Query: 259 ggcacctcagcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtg 318 || || || |||||||| || ||||| || ||||| ||||| | |||||| ||||| || Sbjct: 1635 ggaacatctgcgcaggcagcaagggaaaatgccatggccattctgtggtcatcgtatgta 1576 Query: 319 tcgatcgccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctgggccttcc 378 ||||| || || ||||||| ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 1575 tcgatggctgtcacgttcaatttctctggtggagtgattatgcagtaatctggcccttct 1516 Query: 379 tccaccgttgctcccagctttgtcagctcggtccggatcgcgaccattctttcggtttcc 438 ||||| ||||| || | |||| | ||||| || | || || | ||| | ||||||||| Sbjct: 1515 tccactgttgcgcctaactttctaagctctgtgcatatggcaatcatccgttcggtttct 1456 Query: 439 ttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagggcaaca 498 || || |||||| ||| ||||||| || ||||| || || |||||||| || || ||| Sbjct: 1455 ttaaccctccagctggcgacatctcgaatggcagtgggtccatcggcaaaaagtgccaca 1396 Query: 499 acggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaa 547 || ||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 1395 acagcaagggtcatggcaacatctggcattttgttcatgttgacatcaa 1347 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 592 gtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctca 651 ||||| |||||||| | || ||||||| ||| || |||||||| ||||||| || || Sbjct: 1305 gtaacggttacactgttttcggtccatgaaactttggctcccattttttcaagaacttcc 1246 Query: 652 ncaaatttcacatcaccctgcaaactg 678 ||||||| |||||||||||||||||| Sbjct: 1245 gcaaatttaacatcaccctgcaaactg 1219
>gb|AF371965.1| Dicliptera chinensis 5-enolpyruvylshikimate-3-phosphate synthase mRNA, complete cds; nuclear gene for plastid product Length = 1891 Score = 121 bits (61), Expect = 3e-24 Identities = 277/349 (79%) Strand = Plus / Minus Query: 199 aggacgtcgaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcact 258 |||||||| |||||||| |||||||| || |||||||| || || || |||| || || Sbjct: 1695 aggacgtcaaagtagttagggaaggttttacgggtgcagccaggatctttgattgtgaca 1636 Query: 259 ggcacctcagcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtg 318 || || || ||||| || || ||||| || ||||| ||||| | |||||| ||||| || Sbjct: 1635 ggaacatctgcgcaagcagcaagggaaaatgccatggccattctgtggtcatcgtatgta 1576 Query: 319 tcgatcgccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctgggccttcc 378 ||||| || || ||||||| ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 1575 tcgatggctgtcacgttcaatttctctggtggagtgattatgcagtaatctggcccttct 1516 Query: 379 tccaccgttgctcccagctttgtcagctcggtccggatcgcgaccattctttcggtttcc 438 ||||| ||||| || | |||| | ||||| || | || || | ||| | ||||||||| Sbjct: 1515 tccactgttgcgcctaactttctaagctctgtgcatatggcaatcatccgttcggtttct 1456 Query: 439 ttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagggcaaca 498 || || |||||| ||| ||||||| || ||||| || || |||||||| || || ||| Sbjct: 1455 ttaaccctccagctggcgacatctcgaatggcagtgggtccatcggcaaaaagtgccaca 1396 Query: 499 acggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaa 547 || ||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 1395 acagcaagggtcatggcaacatctggcattttgttcatgttgacatcaa 1347 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 592 gtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctca 651 ||||| |||||||| | || ||||||| ||| || |||||||| ||||||| || || Sbjct: 1305 gtaacggttacactgttttcggtccatgaaactttggctcccattttttcaagaacttcc 1246 Query: 652 ncaaatttcacatcaccctgcaaactg 678 ||||||| |||||||||||||||||| Sbjct: 1245 gcaaatttaacatcaccctgcaaactg 1219
>emb|X51475.1|BNEPSPG Brassica napus 5-enolpyruvylshikimate-3-phosphate synthase gene Length = 3831 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 458 catctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcga 517 |||||||||| | |||||||| |||||||| || ||||||||||| |||||||| || | Sbjct: 2645 catctctgatggtggttggaccatcggcaaagagagcaacaacggctagagtcatggcta 2586 Query: 518 catcaggcattttgttcatgttgacatcaacagc 551 |||||||||||||||||||||||||||||||||| Sbjct: 2585 catcaggcattttgttcatgttgacatcaacagc 2552 Score = 42.1 bits (21), Expect = 2.4 Identities = 75/93 (80%) Strand = Plus / Minus Query: 207 gaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggcacctc 266 |||||||| ||||| ||||| | |||||| || || ||| ||||||| ||||| || || Sbjct: 3054 gaagtagtcagggaaagtcttcctggtgcagccaggatccttgatggtgactggaacatc 2995 Query: 267 agcgcaggccgccagggagaaggccatcgccat 299 ||| || || || || ||||| ||||||||||| Sbjct: 2994 agcacaagctgcaagcgagaacgccatcgccat 2962
>gb|AY512663.1| Brassica rapa 5-enolpyruvylshikimate-3-phosphate synthase (EPSP) mRNA, complete cds Length = 1726 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || ||||||||||| | |||||||| |||||| Sbjct: 1295 ctttctgtctccttaactctccagctagccacatctctgatggtggttggaccatcggca 1236 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || |||||||||||||||||||| || ||||| |||||||| ||||||||||||||| Sbjct: 1235 aagagagcaacaacggcaagagtcatggctacatcgggcattttattcatgttgacatca 1176 Query: 547 acagc 551 ||||| Sbjct: 1175 acagc 1171 Score = 48.1 bits (24), Expect = 0.039 Identities = 75/92 (81%) Strand = Plus / Minus Query: 208 aagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggcacctca 267 ||||||| ||||| ||||||| |||||| || || ||| ||||||| ||||| || ||| Sbjct: 1514 aagtagtcagggaaagtctttctggtgcagccaggatccttgatggtgactggaacatca 1455 Query: 268 gcgcaggccgccagggagaaggccatcgccat 299 || || || || || ||||| ||||||||||| Sbjct: 1454 gcacatgctgcaagcgagaacgccatcgccat 1423
>ref|NM_202267.1| Arabidopsis thaliana 3-phosphoshikimate 1-carboxyvinyltransferase AT1G48860 transcript variant AT1G48860.2 mRNA, complete cds Length = 1837 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1345 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1286 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1285 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1226 Query: 547 a 547 | Sbjct: 1225 a 1225 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1132 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1092
>ref|NM_103780.3| Arabidopsis thaliana 3-phosphoshikimate 1-carboxyvinyltransferase AT1G48860 transcript variant AT1G48860.1 mRNA, complete cds Length = 1885 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1451 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1392 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1391 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1332 Query: 547 a 547 | Sbjct: 1331 a 1331 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1238 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1198
>gb|AY040065.1| Arabidopsis thaliana putative 5-enolpyruvylshikimate-3-phosphate synthase (At1g48860) mRNA, complete cds Length = 1566 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1316 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1257 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1256 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1197 Query: 547 a 547 | Sbjct: 1196 a 1196 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1103 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1063
>gb|AF360224.1| Arabidopsis thaliana putative 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase (At1g48860) mRNA, complete cds Length = 1761 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1328 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1269 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1268 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1209 Query: 547 a 547 | Sbjct: 1208 a 1208 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1115 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1075
>emb|BX815732.1|CNS0AE1R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1815 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1396 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1337 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1336 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1277 Query: 547 a 547 | Sbjct: 1276 a 1276 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1183 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1143
>emb|BX816702.1|CNS0AD13 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1805 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1344 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1285 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1284 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1225 Query: 547 a 547 | Sbjct: 1224 a 1224 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1131 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1091
>gb|AY086717.1| Arabidopsis thaliana clone 270032 mRNA, complete sequence Length = 1885 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | |||||||| |||||| Sbjct: 1451 ctttccgtctcctttactctccagctagccacatctctaatggtggttggaccatcggca 1392 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1391 aagagagcaacgacggcaagagtcattgctacatcaggcattttgttcatgttgacatca 1332 Query: 547 a 547 | Sbjct: 1331 a 1331 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1238 tcaagaacctcggcaaatttcacatctccctgcaaactggt 1198
>gb|AC084242.4|AC084242 Arabidopsis thaliana chromosome 1 BAC T24P22 genomic sequence, complete sequence Length = 18062 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 472 gttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttg 531 |||||||| |||||||| || ||||| |||||||||||||| || ||||||||||||||| Sbjct: 6395 gttggaccatcggcaaagagagcaacgacggcaagagtcattgctacatcaggcattttg 6336 Query: 532 ttcatgttgacatcaa 547 |||||||||||||||| Sbjct: 6335 ttcatgttgacatcaa 6320
>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete sequence Length = 54313 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 472 gttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttg 531 |||||||| |||||||| || ||||| |||||||||||||| || ||||||||||||||| Sbjct: 50677 gttggaccatcggcaaagagagcaacgacggcaagagtcattgctacatcaggcattttg 50618 Query: 532 ttcatgttgacatcaa 547 |||||||||||||||| Sbjct: 50617 ttcatgttgacatcaa 50602
>gb|AY545668.1| Conyza canadensis 5-enol-pyruvylshikimate-phosphate synthase (EPSPS3) mRNA, partial cds Length = 1452 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 208 aagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggcacctca 267 ||||||| ||||||| |||| |||||||| || |||||| ||||||| || || || || Sbjct: 1334 aagtagtcggggaagctcttacgggtgcaacctgggtccttgatggtgacaggaacgtct 1275 Query: 268 gcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatcgcc 327 || ||||| || || ||||| | ||| ||||| | ||| || ||||| ||||| || || Sbjct: 1274 gcacaggcagcaagcgagaaagtcatggccattctgtgatcatcgtatgtgtcaattgct 1215 Query: 328 gtgacgttcagcttctccggtggcgtgatgatgcagtagtctgggccttcctccaccgtt 387 || || |||| ||||| ||||| ||| | | || || ||||| ||||| || || ||| Sbjct: 1214 gtcacattcaatttctctggtggagtggtcacacaataatctggaccttcttcgactgtt 1155 Query: 388 gctcccagctttgtcagctcggtccggatcgcgaccattctttcggtttccttcactctc 447 ||||||| |||| | || || || | ||| || | ||| ||||| ||||| || |||||| Sbjct: 1154 gctcccaactttcttagttctgtgcagatggcaatcatcctttccgtttcttttactctc 1095 Query: 448 caggaggcaacatctctgatagcagttggaccgtcggcaaacagggcaacaacggcaaga 507 ||| || |||||||| || ||||| ||||| || ||| | |||||||| || |||||| Sbjct: 1094 cagctagccacatctctaatggcagtgggaccatcagcataaagggcaaccacagcaaga 1035 Query: 508 gtcatcgcgacatcaggcattttgttcatgttgacatc 545 |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1034 gtcatcgcaacatctggcattttgttcatgttcacatc 997 Score = 46.1 bits (23), Expect = 0.15 Identities = 34/38 (89%) Strand = Plus / Minus Query: 641 caagtacctcancaaatttcacatcaccctgcaaactg 678 |||| |||||| ||||||| ||||||||||| |||||| Sbjct: 901 caaggacctcagcaaattttacatcaccctgtaaactg 864
>gb|M61905.1|TOBEPSPS2 N.tabacum 5-enolpyruvylshikimate-3-phosphate synthase mRNA, 5' cds Length = 1322 Score = 99.6 bits (50), Expect = 1e-17 Identities = 164/202 (81%) Strand = Plus / Minus Query: 346 ggtggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagctttgtcagc 405 ||||| ||||| |||||||||||||| ||||| || || |||||||||| ||| | || Sbjct: 848 ggtggggtgattatgcagtagtctggcccttcttcaacagttgctcccaacttcctaagt 789 Query: 406 tcggtccggatcgcgaccattctttcggtttccttcactctccaggaggcaacatctctg 465 || || | || |||| ||| | || |||||||| ||||||||| ||||| ||||| Sbjct: 788 tctgtgcatatggcgatcatgcgctcagtttccttgactctccagctagcaacgtctctt 729 Query: 466 atagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggc 525 |||||||| ||||| |||||||| || ||||| || ||||| ||||| || ||||||||| Sbjct: 728 atagcagtgggaccatcggcaaaaagtgcaactacagcaagtgtcatagcaacatcaggc 669 Query: 526 attttgttcatgttgacatcaa 547 ||||| |||||||| ||||||| Sbjct: 668 attttattcatgttcacatcaa 647
>ref|NM_130093.2| Arabidopsis thaliana 3-phosphoshikimate 1-carboxyvinyltransferase AT2G45300 mRNA, complete cds Length = 1974 Score = 97.6 bits (49), Expect = 5e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | ||||||||||| ||| Sbjct: 1520 ctttctgtctcctttactctccagctagccacatctctaatggtggttggaccgtcagca 1461 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 1460 aagagagcaacgacggcaagggtcatggctacatcaggcattttgttcatgttgacatca 1401 Query: 547 a 547 | Sbjct: 1400 a 1400
>gb|DQ166525.1| Fagus sylvatica putative 5-enolpyruvylshikimate 3-phosphate synthase mRNA, complete cds Length = 2085 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 460 tctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgaca 519 ||||| |||||||| || || |||||||| |||||||| || ||||||||||| || ||| Sbjct: 1589 tctcttatagcagtgggtccatcggcaaaaagggcaactacagcaagagtcatggcaaca 1530 Query: 520 tcaggcattttgttcatgttgacatcaacagct 552 || ||||||||||||||||||||||||| |||| Sbjct: 1529 tccggcattttgttcatgttgacatcaatagct 1497
>gb|AF440389.1|AF440389 Orychophragmus violaceus 5-enolpyruvylshikimate-3-phosphate synthase mRNA, complete cds Length = 1758 Score = 97.6 bits (49), Expect = 5e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | ||||| || || ||| Sbjct: 1391 ctttcagtctccttaactctccagctagccacatctctaatggtggttgggccatctgca 1332 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || |||||||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 1331 aagagagcaacaacggcaagagtcatggctacatcaggcattttattcatgttgacatca 1272 Query: 547 acagc 551 ||||| Sbjct: 1271 acagc 1267
>gb|BT022026.1| Arabidopsis thaliana At2g45300 gene, complete cds Length = 1804 Score = 97.6 bits (49), Expect = 5e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||| || ||||| ||||||||| || |||||||| || | ||||||||||| ||| Sbjct: 1443 ctttctgtctcctttactctccagctagccacatctctaatggtggttggaccgtcagca 1384 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 || || ||||| |||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 1383 aagagagcaacgacggcaagggtcatggctacatcaggcattttgttcatgttgacatca 1324 Query: 547 a 547 | Sbjct: 1323 a 1323
>emb|X06613.1|ATEPSPS Arabidopsis thaliana gene for 5-enolpyruvylshikimate-3-phosphate synthase (EPSP) Length = 2763 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 472 gttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttg 531 ||||||||||| ||||| || ||||| |||||||| ||||| || ||||||||||||||| Sbjct: 2272 gttggaccgtcagcaaagagagcaacgacggcaagggtcatggctacatcaggcattttg 2213 Query: 532 ttcatgttgacatcaa 547 |||||||||||||||| Sbjct: 2212 ttcatgttgacatcaa 2197
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete sequence Length = 122928 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 472 gttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttg 531 ||||||||||| ||||| || ||||| |||||||| ||||| || ||||||||||||||| Sbjct: 68527 gttggaccgtcagcaaagagagcaacgacggcaagggtcatggctacatcaggcattttg 68586 Query: 532 ttcatgttgacatcaa 547 |||||||||||||||| Sbjct: 68587 ttcatgttgacatcaa 68602
>gb|M21084.1|PETAROA P.hybrida 5-enolpyruvylshikimate 3-phosphate synthase mRNA, complete cds Length = 1944 Score = 95.6 bits (48), Expect = 2e-16 Identities = 168/208 (80%) Strand = Plus / Minus Query: 340 ttctccggtggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagcttt 399 ||||||||||| ||||| |||||||||||||| ||||| || || |||||||| | ||| Sbjct: 1415 ttctccggtggggtgattatgcagtagtctggtccttcttcaacggttgctcctaacttc 1356 Query: 400 gtcagctcggtccggatcgcgaccattctttcggtttccttcactctccaggaggcaaca 459 | || || || | || |||| ||| | || |||||||| ||||||||| |||||| Sbjct: 1355 ctaagttctgtgcatatggcgatcatgcgctcagtttccttgactctccagctagcaaca 1296 Query: 460 tctctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgaca 519 ||||| ||||| || ||||| || ||| | || |||||||| ||||| ||||| || ||| Sbjct: 1295 tctcttatagctgtgggaccatcagcataaagtgcaacaacagcaagtgtcatggcaaca 1236 Query: 520 tcaggcattttgttcatgttgacatcaa 547 ||||||||||| |||||||| ||||||| Sbjct: 1235 tcaggcattttattcatgttcacatcaa 1208 Score = 56.0 bits (28), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 628 gctcccatcatttcaagtacctcancaaatttcacatcaccctgcaaactg 678 |||||||| |||||||||||||| ||||||| ||||| ||||| |||||| Sbjct: 1127 gctcccattttttcaagtacctcagcaaatttgacatccccctgtaaactg 1077
>gb|AY545657.1| Amaranthus rudis 5-enol-pyruvylshikimate-phosphate synthase (EPSPS1) mRNA, partial cds Length = 1071 Score = 93.7 bits (47), Expect = 7e-16 Identities = 199/250 (79%) Strand = Plus / Minus Query: 429 ttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaa 488 |||||||||||||||||||||| || |||||||| || ||||| || || || ||| | Sbjct: 951 ttcggtttccttcactctccagctagccacatctctaatggcagtgggcccatctgcata 892 Query: 489 cagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaac 548 || ||||||||| ||||||||||| || ||||| |||||||| ||||||||||| || | Sbjct: 891 caaggcaacaactgcaagagtcatagcaacatctggcattttattcatgttgacgtcgat 832 Query: 549 agcttttaggtgtttccttccaaatggctgacgcggtggaccagtaacagttacactagt 608 ||| | |||||||||||| ||| | | ||||| |||||||||||||| ||| | Sbjct: 831 agcgcgcaaatgtttccttccagatgattccctgggtggtccagtaacagttacgctatt 772 Query: 609 gtcagtccatgtaacctttgctcccatcatttcaagtacctcancaaatttcacatcacc 668 ||| ||||| || ||||| |||||| | ||||| || || ||||||| |||||||| Sbjct: 771 gtctgtccaggtgaccttgcaacccatcttctcaagaacttcggcaaattttacatcacc 712 Query: 669 ctgcaaactg 678 ||| |||||| Sbjct: 711 ctgtaaactg 702
>gb|M61904.1|TOBEPSPS1 N.tabacum 5-enolpyruvylshikimate-3-phosphate synthase mRNA, complete cds Length = 2011 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 433 gtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagg 492 |||||||| ||||||||| ||||||||||| || ||||| ||||| || ||||| || Sbjct: 1419 gtttccttaactctccagctagcaacatctcttatggcagtaggaccatcagcaaaaagt 1360 Query: 493 gcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaacagc 551 ||||| || ||||||||||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 1359 gcaactacagcaagagtcatggcaacatctggcattttgttcatgttaacgtcaacagc 1301 Score = 50.1 bits (25), Expect = 0.010 Identities = 133/169 (78%) Strand = Plus / Minus Query: 202 acgtcgaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggc 261 ||||| ||||||||||||||||| || || || || ||||||||| | ||||| ||||| Sbjct: 1650 acgtcaaagtagttggggaaggttttgcgagtacaaccggggtccttaatggtgactgga 1591 Query: 262 acctcagcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcg 321 || || || || || || || ||||| ||||| ||||| | ||| || || || || || Sbjct: 1590 acatctgcacaagcagcaagagagaaagccatggccattctgtgatcatcatatgtatca 1531 Query: 322 atcgccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctg 370 || |||| ||||| | ||| || ||||| ||||| ||||||||||||| Sbjct: 1530 atttccgttacgtttaacttttcaggtggagtgattatgcagtagtctg 1482 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/66 (83%) Strand = Plus / Minus Query: 613 gtccatgtaacctttgctcccatcatttcaagtacctcancaaatttcacatcaccctgc 672 ||||||||||| | ||| |||||| |||| || |||||| |||| || ||||| ||||| Sbjct: 1239 gtccatgtaacttctgcccccatcttttcgaggacctcagcaaacttaacatccccctgt 1180 Query: 673 aaactg 678 |||||| Sbjct: 1179 aaactg 1174
>gb|AY150520.1| Vitis vinifera 5-enolpyruvylshikimate-3-phosphate synthase mRNA, partial cds Length = 1023 Score = 89.7 bits (45), Expect = 1e-14 Identities = 273/349 (78%) Strand = Plus / Minus Query: 199 aggacgtcgaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcact 258 ||||| |||||||||| ||| |||| || ||| |||| || || ||| ||||||| ||| Sbjct: 971 aggacttcgaagtagtcaggggaggttttccggatgcaaccaggatccttgatggttact 912 Query: 259 ggcacctcagcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtg 318 || || || || ||||| || || || || ||||| ||||||| ||| |||||||| ||| Sbjct: 911 ggaacatctgcacaggcagcaagagaaaatgccatggccatcctgtgatcgtcgtatgtg 852 Query: 319 tcgatcgccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctgggccttcc 378 || || | || ||||| || || || ||||| ||||| | ||||| || || ||||| Sbjct: 851 tctattgatgtcacgtttagtttttctggtggagtgatcacacagtaatcaggcccttct 792 Query: 379 tccaccgttgctcccagctttgtcagctcggtccggatcgcgaccattctttcggtttcc 438 || || |||||||||||||| | || || || | || || | ||| |||||||| ||| Sbjct: 791 tcaactgttgctcccagcttcctgagttctgtgcaaatggcaatcatcctttcggtctcc 732 Query: 439 ttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagggcaaca 498 ||||||||||| || |||||||| || ||||| || || || ||| | |||||||| Sbjct: 731 ttcactctccaactagccacatctcttatggcagtcggcccctcagcataaagggcaacc 672 Query: 499 acggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaa 547 || ||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct: 671 acagcaagagtcatggcaacatctggcattttgttcatgttgacgtcaa 623
>gb|M21071.1|TOMAROA Tomato 5-enolpyruvylshikimate-3-phosphate synthase mRNA, complete cds Length = 2045 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 433 gtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggcaaacagg 492 |||||||| ||||||||| ||||| ||||| || | ||| ||||| || ||||| || Sbjct: 1496 gtttcctttactctccagctagcaacgtctcttatggtagtaggaccatcagcaaaaagt 1437 Query: 493 gcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgtt 539 ||||| |||||||||||||| || ||||| ||||||||||||||||| Sbjct: 1436 gcaactacggcaagagtcatggccacatctggcattttgttcatgtt 1390 Score = 44.1 bits (22), Expect = 0.61 Identities = 130/166 (78%) Strand = Plus / Minus Query: 205 tcgaagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggcacc 264 |||||||||| ||||||||| || || || || || |||| | | || || ||||| || Sbjct: 1724 tcgaagtagtcggggaaggttttgcgagtacagccagggttcttaatagtgactggaaca 1665 Query: 265 tcagcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatc 324 ||||| || || || || ||||| ||||| ||||| | |||||| || || || || ||| Sbjct: 1664 tcagcacaagcagcaagagagaaagccatagccattctgtggtcatcatatgtatcaatc 1605 Query: 325 gccgtgacgttcagcttctccggtggcgtgatgatgcagtagtctg 370 |||| ||||| | ||| || ||||| ||||| ||||||||||||| Sbjct: 1604 tccgttacgtttaacttttctggtggggtgattatgcagtagtctg 1559
>gb|AY545659.1| Erigeron annuus 5-enol-pyruvylshikimate-phosphate synthase (EPSPS) mRNA, partial cds Length = 1074 Score = 73.8 bits (37), Expect = 7e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 427 ctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtcggca 486 ||||||||||| || ||||||||| ||||||||||| || || || || || || ||| Sbjct: 953 ctttcggtttctttaactctccagctagcaacatctctaatggctgtagggccatcagca 894 Query: 487 aacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatca 546 | || || || || ||||||||||| || ||||||||||| ||||||||||| |||||| Sbjct: 893 taaagcgcgaccacagcaagagtcatggcaacatcaggcatcttgttcatgttcacatca 834 Query: 547 acagc 551 ||||| Sbjct: 833 acagc 829 Score = 60.0 bits (30), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 641 caagtacctcancaaatttcacatcaccctgcaaact 677 ||||||||||| |||| |||||||||||||||||||| Sbjct: 739 caagtacctcagcaaacttcacatcaccctgcaaact 703
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 73.8 bits (37), Expect = 7e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 272 aggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatc 324 |||||||||| || |||||||||||||| ||||| |||||||||||||||||| Sbjct: 959659 aggccgccagcgaaaaggccatcgccatgcggtgatcgtcgtaggtgtcgatc 959607
>gb|AY545667.1| Conyza canadensis 5-enol-pyruvylshikimate-phosphate synthase (EPSPS2) gene, complete cds Length = 7954 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 490 agggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatc 545 |||||||| || |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 6387 agggcaaccacagcaagagtcatcgcaacatccggcattttgttcatgttcacatc 6332 Score = 69.9 bits (35), Expect = 1e-08 Identities = 149/187 (79%) Strand = Plus / Minus Query: 208 aagtagttggggaaggtctttcgggtgcacccggggtccctgatggtcactggcacctca 267 ||||||| |||||||||||| |||||||| || |||||| | ||||| || || ||||| Sbjct: 7775 aagtagtcggggaaggtcttacgggtgcaacccgggtccttaatggtgacaggaacctct 7716 Query: 268 gcgcaggccgccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatcgcc 327 || ||||| || || ||||| ||||| ||||| | ||| || ||||| |||||||| || Sbjct: 7715 gcacaggcggcaagcgagaaagccatggccattctgtgatcatcgtatgtgtcgattgct 7656 Query: 328 gtgacgttcagcttctccggtggcgtgatgatgcagtagtctgggccttcctccaccgtt 387 || || |||| ||||| ||||| ||||| | || || ||||| ||||| || || ||| Sbjct: 7655 gtcacattcaatttctctggtggagtgatcacacaataatctggaccttcttcgactgtt 7596 Query: 388 gctccca 394 ||||||| Sbjct: 7595 gctccca 7589 Score = 40.1 bits (20), Expect = 9.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 641 caagtacctcancaaatttcacatcaccctg 671 |||| |||||| ||||||| ||||||||||| Sbjct: 6236 caaggacctcagcaaattttacatcaccctg 6206
>gb|DQ462442.2| Allium macrostemon EPSP synthase mRNA, partial cds Length = 1150 Score = 71.9 bits (36), Expect = 3e-09 Identities = 213/272 (78%) Strand = Plus / Minus Query: 283 gagaaggccatcgccatccggtggtcgtcgtaggtgtcgatcgccgtgacgttcagcttc 342 ||||| ||||| ||||||| ||| || ||||| ||||| || |||| || || | ||| Sbjct: 822 gagaatgccattgccatcctgtgatcatcgtaagtgtctatttccgtcacatttaacttt 763 Query: 343 tccggtggcgtgatgatgcagtagtctgggccttcctccaccgttgctcccagctttgtc 402 |||||||| || || |||||||| || || || || |||| |||||||| |||||| || Sbjct: 762 tccggtggagttattatgcagtaatcaggcccctctaccacagttgctccaagctttctc 703 Query: 403 agctcggtccggatcgcgaccattctttcggtttccttcactctccaggaggcaacatct 462 | ||| || | || || | ||| | ||| || |||||||| ||||| |||||||||||| Sbjct: 702 aactctgtacaaatggcaatcatccgttcagtctccttcaccctccaagaggcaacatct 643 Query: 463 ctgatagcagttggaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatca 522 || || | || || || || ||| | || |||||||| || | ||||| || |||||| Sbjct: 642 ctaatggtggtgggtccatcagcatagagagcaacaactgctaaggtcattgcaacatca 583 Query: 523 ggcattttgttcatgttgacatcaacagcttt 554 ||||||||||||||||| || ||||||||||| Sbjct: 582 ggcattttgttcatgttaacgtcaacagcttt 551
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 278 ccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatc 324 |||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 3326862 ccagcgagaagcacatcgccatccggtggtcgtcgtaggtgtcgatc 3326816
>gb|AY545666.1| Conyza canadensis 5-enol-pyruvylshikimate-phosphate synthase (EPSPS1) gene, complete cds Length = 6988 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 502 gcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaacagc 551 ||||||||||| || ||||||||||| ||||||||||| ||||||||||| Sbjct: 5735 gcaagagtcatggcaacatcaggcatcttgttcatgttcacatcaacagc 5686
>dbj|AB232860.1| Lactuca sativa mRNA for 5-enolpyruvylshikimate-3-phosphate synthase, partial cds, clone: EPSPS2 Length = 695 Score = 65.9 bits (33), Expect = 2e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 488 acagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgacatcaa 547 |||| ||||| || || || ||||| || ||||||||||||||||||||||| ||||||| Sbjct: 509 acagagcaaccaccgcwagggtcatggcaacatcaggcattttgttcatgtttacatcaa 450 Query: 548 cag 550 ||| Sbjct: 449 cag 447
>gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete sequence Length = 106395 Score = 63.9 bits (32), Expect = 7e-07 Identities = 67/79 (84%) Strand = Plus / Plus Query: 592 gtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttcaagtacctca 651 |||||||||||||| | || ||||||||||| || ||||||||| ||||||| || ||| Sbjct: 49286 gtaacagttacactgttttctgtccatgtaactttagctcccatcttttcaaggacttca 49345 Query: 652 ncaaatttcacatcaccct 670 ||||||| ||||| |||| Sbjct: 49346 gcaaattttacatctccct 49364
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcg 325 ||||||||||||||| ||||||||||||||||||| Sbjct: 453922 catcgccatccggtgatcgtcgtaggtgtcgatcg 453956
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcg 325 ||||||||||||||| ||||||||||||||||||| Sbjct: 3299962 catcgccatccggtgatcgtcgtaggtgtcgatcg 3299996
>dbj|AB232859.1| Lactuca sativa mRNA for 5-enolpyruvylshikimate-3-phosphate synthase, partial cds, clone: EPSPS1 Length = 695 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 423 cattctttcggtttccttcactctccaggaggcaacatctctgatagcagttggaccgtc 482 ||||||||||||||| || ||||||||| ||||| ||||| || | || || || || Sbjct: 574 cattctttcggtttctttaactctccagctagcaacgtctctaatggtggtggggccatc 515 Query: 483 ggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgttgac 542 |||| | ||||| || || ||||||||||| || || || ||||||||||||||||| || Sbjct: 514 ggcatagagggcgaccacagcaagagtcatggcaacgtccggcattttgttcatgtttac 455 Query: 543 atc 545 ||| Sbjct: 454 atc 452
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcg 325 ||||||||||||||| ||||||||||||||||||| Sbjct: 1846059 catcgccatccggtgatcgtcgtaggtgtcgatcg 1846025
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcgccg 328 ||||||||||||||| |||||||| ||||||||||||| Sbjct: 1094799 catcgccatccggtgatcgtcgtacgtgtcgatcgccg 1094762
>gb|AY545660.1| Erigeron annuus 5-enol-pyruvylshikimate-phosphate synthase (EPSPS2) mRNA, partial cds Length = 1081 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 490 agggcaacaacggcaagagtcatcgcgacatcaggcattttgttcatgtt 539 |||||||| || ||||||||||| || ||||| ||||||||||||||||| Sbjct: 896 agggcaaccacagcaagagtcatagcaacatctggcattttgttcatgtt 847 Score = 54.0 bits (27), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 641 caagtacctcancaaatttcacatcaccctgcaaactg 678 ||||||||||| ||||||| ||||||||||| |||||| Sbjct: 745 caagtacctcagcaaattttacatcaccctgtaaactg 708
>emb|BX818343.1|CNS0AAQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 476 gaccgtcggcaaacagggcaacaacggcaagagtcatcgcgacatcaggcattttgttca 535 |||| |||||||| | ||||| ||||||||| |||| || |||||| |||||||||||| Sbjct: 1286 gaccatcggcaaagacagcaacgacggcaagactcattgctacatcacgcattttgttca 1227 Query: 536 tgttg 540 ||||| Sbjct: 1226 tgttg 1222 Score = 44.1 bits (22), Expect = 0.61 Identities = 36/41 (87%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaactggt 680 ||||| ||||| |||||||||||| |||||||||||||| Sbjct: 1121 tcaagaacctcggcaaatttcacatttccctgcaaactggt 1081
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcg 325 ||||||||||||||| ||||||||||| ||||||| Sbjct: 3031091 catcgccatccggtgatcgtcgtaggtatcgatcg 3031125
>gb|AY286122.1| Cyanidioschyzon merolae DBV201 chromosome 1, complete sequence Length = 422021 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 289 gccatcgccatccggtggtcgtcgtaggt 317 |||||||||||||| |||||||||||||| Sbjct: 142633 gccatcgccatccgatggtcgtcgtaggt 142605
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgat 323 ||||||||| ||||| ||||||||||||||||| Sbjct: 1120139 catcgccatgcggtgatcgtcgtaggtgtcgat 1120171 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgat 323 ||||||||| ||||| ||||||||||||||||| Sbjct: 977107 catcgccatgcggtgatcgtcgtaggtgtcgat 977139
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 278 ccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgatcgc 326 |||| |||||| ||||||||| |||||||| ||||||||||| ||||| Sbjct: 534935 ccagcgagaagcacatcgccatgcggtggtcatcgtaggtgtcaatcgc 534983
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 289 gccatcgccatccggtggtcgtcgtaggt 317 |||||||||||||||||||| |||||||| Sbjct: 2745098 gccatcgccatccggtggtcttcgtaggt 2745070
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgat 323 ||||||||| || |||||||||||||||||||| Sbjct: 1017654 catcgccatgcgatggtcgtcgtaggtgtcgat 1017622
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgat 323 ||||||||| |||||||||||||| |||||||| Sbjct: 1472579 catcgccatgcggtggtcgtcgtacgtgtcgat 1472547
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgat 323 ||||||||| |||||||||||||| |||||||| Sbjct: 880344 catcgccatgcggtggtcgtcgtaagtgtcgat 880312
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 288 ggccatcgccatccggtggtcgtcgtagg 316 |||||||||||||||||||||| |||||| Sbjct: 3704448 ggccatcgccatccggtggtcggcgtagg 3704420
>gb|AY545664.1| Nymphaea alba 5-enol-pyruvylshikimate-phosphate synthase (EPSPS) mRNA, partial cds Length = 792 Score = 48.1 bits (24), Expect = 0.039 Identities = 74/91 (81%) Strand = Plus / Minus Query: 583 ggtggaccagtaacagttacactagtgtcagtccatgtaacctttgctcccatcatttca 642 |||||||| |||||||| ||||| | | || ||| |||||||| |||||||| | || Sbjct: 758 ggtggaccggtaacagtgacactgttctgagaccaagtaaccttagctcccattttctcc 699 Query: 643 agtacctcancaaatttcacatcaccctgca 673 || || ||| |||| |||||||||||||||| Sbjct: 698 agaacttcagcaaacttcacatcaccctgca 668
>gb|AY545665.1| Plantago lanceolata 5-enol-pyruvylshikimate-phosphate synthase (EPSPS) mRNA, partial cds Length = 795 Score = 46.1 bits (23), Expect = 0.15 Identities = 34/38 (89%) Strand = Plus / Minus Query: 640 tcaagtacctcancaaatttcacatcaccctgcaaact 677 |||||||||||| | ||||| ||||||||||| ||||| Sbjct: 701 tcaagtacctcagcgaatttaacatcaccctgtaaact 664
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 cggtggtcgtcgtaggtgtcgat 323 ||||||||||||||||||||||| Sbjct: 114621 cggtggtcgtcgtaggtgtcgat 114643
>gb|AY545661.1| Helianthus salicifolius 5-enol-pyruvylshikimate-phosphate synthase (EPSPS1) mRNA, partial cds Length = 792 Score = 44.1 bits (22), Expect = 0.61 Identities = 33/37 (89%) Strand = Plus / Minus Query: 641 caagtacctcancaaatttcacatcaccctgcaaact 677 |||| ||||| ||||||||||||||||||| ||||| Sbjct: 697 caagaacctccgcaaatttcacatcaccctgtaaact 661
>gb|AE004251.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 159 of 251 of the complete chromosome Length = 12101 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcgccg 328 ||||||||||||||| ||||| ||||| ||||| |||| Sbjct: 4051 catcgccatccggtgatcgtcataggtatcgattgccg 4088
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 278 ccagggagaaggccatcgccatccggtggtcgtcgtaggtgtcgat 323 |||| |||||| ||| ||||| ||||| ||||||||||||||||| Sbjct: 3803102 ccagcgagaagcacatggccatgcggtgatcgtcgtaggtgtcgat 3803147
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 gccatccggtggtcgtcgtagg 316 |||||||||||||||||||||| Sbjct: 618832 gccatccggtggtcgtcgtagg 618853
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 291 catcgccatccggtggtcgtcgtaggtgtcgatcgccg 328 |||||||||||| ||||| || ||||| |||||||||| Sbjct: 1390163 catcgccatccgatggtcatcataggtatcgatcgccg 1390126
>gb|AY496581.1| Uncultured bacterium clone pELP182 putative 3-phosphoshikimate 1-carboxyvinyltransferase gene, partial cds; and lipase/esterase gene, complete cds Length = 1866 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 282 ggagaaggccatcgccatccggtggtcgtcgtaggtgtcgat 323 |||||| |||||||| || || |||||||||||||| ||||| Sbjct: 721 ggagaacgccatcgcgatgcgatggtcgtcgtaggtttcgat 680
>gb|AC113033.13| Mus musculus chromosome 7, clone RP23-220I5, complete sequence Length = 177962 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cactacaaaactaatattaaa 73 ||||||||||||||||||||| Sbjct: 150450 cactacaaaactaatattaaa 150470
>gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, complete sequence Length = 194207 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cactacaaaactaatattaaa 73 ||||||||||||||||||||| Sbjct: 162722 cactacaaaactaatattaaa 162702
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 gccatccggtggtcgtcgtaggtgt 319 ||||| ||||||||||||||||||| Sbjct: 301393 gccatgcggtggtcgtcgtaggtgt 301417
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gccatccggtggtcgtcgtaggtgtcgat 323 ||||| |||||||||||||| |||||||| Sbjct: 226080 gccatgcggtggtcgtcgtaagtgtcgat 226052
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 catcgccatccggtggtcgtcgtaggtgt 319 ||||||||| ||||||||||| ||||||| Sbjct: 1693637 catcgccatgcggtggtcgtcataggtgt 1693665
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 gccagggagaaggccatcgccatcc 301 ||||| ||||||||||||||||||| Sbjct: 1601078 gccagtgagaaggccatcgccatcc 1601102
>gb|AY618934.1| Ambystoma tigrinum tigrinum RhAG-like protein mRNA, complete cds Length = 1942 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgcaggccgccagggagaag 288 |||||||||||||||||||| Sbjct: 780 cgcaggccgccagggagaag 761
>ref|XM_511367.1| PREDICTED: Pan troglodytes similar to PHD zinc finger transcription factor (LOC454538), mRNA Length = 4164 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 800 cactctccaggaggcaacat 781
>ref|XM_361703.1| Magnaporthe grisea 70-15 hypothetical protein (MG04177.4) partial mRNA Length = 5685 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gccgccagggagaaggccat 293 |||||||||||||||||||| Sbjct: 4651 gccgccagggagaaggccat 4670
>ref|XM_583607.2| PREDICTED: Bos taurus similar to PHD finger protein 12, transcript variant 1 (LOC507057), mRNA Length = 4205 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 549 cactccccaggaggcaacatctct 526
>ref|XM_882383.1| PREDICTED: Bos taurus similar to PHD finger protein 12, transcript variant 6 (LOC507057), mRNA Length = 4367 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 1105 cactccccaggaggcaacatctct 1082
>ref|XM_882375.1| PREDICTED: Bos taurus similar to PHD finger protein 12, transcript variant 5 (LOC507057), mRNA Length = 1254 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 549 cactccccaggaggcaacatctct 526
>ref|XM_882366.1| PREDICTED: Bos taurus similar to PHD finger protein 12, transcript variant 4 (LOC507057), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 824 cactccccaggaggcaacatctct 801
>gb|AY657980.1| Synthetic construct Peudomonas aeruginosa clone FLH046542.01F PA1287 gene, partial cds Length = 555 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 caggccgccagggagaaggccatcgcca 298 |||||||||| |||||||||||||||| Sbjct: 517 caggccgccatcgagaaggccatcgcca 544
>gb|BC043080.1| Mus musculus PHD finger protein 12, mRNA (cDNA clone MGC:57991 IMAGE:6400617), complete cds Length = 4015 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 389 cactccccaggaggcaacatctct 366
>gb|BC068803.1| Xenopus laevis hypothetical protein MGC81393, mRNA (cDNA clone MGC:81393 IMAGE:6634814), complete cds Length = 4036 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 |||||||| ||||||||||||||| Sbjct: 743 cactctcctggaggcaacatctct 720
>ref|NM_174852.2| Mus musculus PHD finger protein 12 (Phf12), mRNA Length = 4015 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 389 cactccccaggaggcaacatctct 366
>ref|NM_001033561.1| Homo sapiens PHD finger protein 12 (PHF12), transcript variant 1, mRNA Length = 4475 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 820 cactctccaggaggcaacat 801
>ref|NM_020889.2| Homo sapiens PHD finger protein 12 (PHF12), transcript variant 2, mRNA Length = 2957 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 820 cactctccaggaggcaacat 801
>ref|XM_863202.1| PREDICTED: Canis familiaris similar to PHD finger protein 12 (PHD factor 1) (Pf1), transcript variant 5 (LOC491174), mRNA Length = 2954 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 821 cactccccaggaggcaacatctct 798
>ref|XM_863198.1| PREDICTED: Canis familiaris similar to PHD finger protein 12 (PHD factor 1) (Pf1), transcript variant 4 (LOC491174), mRNA Length = 3260 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 821 cactccccaggaggcaacatctct 798
>ref|XM_863191.1| PREDICTED: Canis familiaris similar to PHD finger protein 12 (PHD factor 1) (Pf1), transcript variant 3 (LOC491174), mRNA Length = 2761 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 167 cactccccaggaggcaacatctct 144
>ref|XM_863187.1| PREDICTED: Canis familiaris similar to PHD finger protein 12 (PHD factor 1) (Pf1), transcript variant 2 (LOC491174), mRNA Length = 3207 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 1099 cactccccaggaggcaacatctct 1076
>ref|XM_548294.2| PREDICTED: Canis familiaris similar to PHD finger protein 12 (PHD factor 1) (Pf1), transcript variant 1 (LOC491174), mRNA Length = 3323 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 821 cactccccaggaggcaacatctct 798
>gb|BC043787.1| Xenopus laevis PHD finger protein 12, mRNA (cDNA clone MGC:53023 IMAGE:5537207), complete cds Length = 4041 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 |||||||| ||||||||||||||| Sbjct: 778 cactctcctggaggcaacatctct 755
>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the 3' end of the variant for the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 172845 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ctacaaaactaatattaaag 74 |||||||||||||||||||| Sbjct: 85794 ctacaaaactaatattaaag 85813
>gb|BC001657.1| Homo sapiens PHD finger protein 12, mRNA (cDNA clone IMAGE:3356959), partial cds Length = 1508 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 37 cactctccaggaggcaacat 18
>emb|AL845484.9| Mouse DNA sequence from clone RP23-336L14 on chromosome 11 Contains the 3' end of the Sez6 gene for seizure related gene 6, complete sequence Length = 47702 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 37278 cactccccaggaggcaacatctct 37255
>dbj|AK141796.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030073M15 product:PHD finger protein 12, full insert sequence Length = 2967 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 690 cactccccaggaggcaacatctct 667
>dbj|AK155354.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630221O09 product:PHD finger protein 12, full insert sequence Length = 4276 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 827 cactccccaggaggcaacatctct 804
>dbj|AK170187.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025O20 product:PHD finger protein 12, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 81 cactccccaggaggcaacatctct 58
>dbj|AK170155.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630023A05 product:PHD finger protein 12, full insert sequence Length = 3303 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 874 cactccccaggaggcaacatctct 851
>dbj|AK010807.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410142K10 product:PHD-finger containing protein, full insert sequence Length = 1399 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 845 cactccccaggaggcaacatctct 822
>gb|AY030283.1| Homo sapiens PHD zinc finger transcription factor mRNA, complete cds Length = 2959 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 822 cactctccaggaggcaacat 803
>dbj|AK053787.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130308H24 product:PHD ZINC FINGER TRANSCRIPTION FACTOR homolog [Homo sapiens], full insert sequence Length = 1227 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 787 cactccccaggaggcaacatctct 764
>dbj|AK089226.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630045O13 product:PHD ZINC FINGER TRANSCRIPTION FACTOR homolog [Homo sapiens], full insert sequence Length = 3048 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 850 cactccccaggaggcaacatctct 827
>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2, complete sequence Length = 185706 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acaaaactaatattaaagac 76 |||||||||||||||||||| Sbjct: 44370 acaaaactaatattaaagac 44351
>gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 atcaggcattttgttcatgttgac 542 ||||||||||||||| |||||||| Sbjct: 120062 atcaggcattttgttaatgttgac 120085
>gb|AC016743.10| Homo sapiens BAC clone RP11-475H17 from 2, complete sequence Length = 144355 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttaaagactcatacaccatc 88 |||||||||||||||||||| Sbjct: 15926 ttaaagactcatacaccatc 15945
>gb|AE004558.1| Pseudomonas aeruginosa PAO1, section 119 of 529 of the complete genome Length = 9917 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 caggccgccagggagaaggccatcgcca 298 |||||||||| |||||||||||||||| Sbjct: 5036 caggccgccatcgagaaggccatcgcca 5063
>ref|XM_220644.3| PREDICTED: Rattus norvegicus PHD finger protein 12 (predicted) (Phf12_predicted), mRNA Length = 4015 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacatctct 464 ||||| |||||||||||||||||| Sbjct: 821 cactccccaggaggcaacatctct 798
>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence Length = 175020 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 120170 cactctccaggaggcaacat 120189
>emb|BX284691.5| Zebrafish DNA sequence from clone CH211-224J19 in linkage group 2, complete sequence Length = 174775 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 acaaaactaatattaaagac 76 |||||||||||||||||||| Sbjct: 91760 acaaaactaatattaaagac 91779
>dbj|AK160370.1| Homo sapiens mRNA for FLJ00295 protein Length = 5572 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 284 cactctccaggaggcaacat 265
>dbj|AB017064.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDN11 Length = 83373 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 acaaaactaatattaaagac 76 |||||||||||||||||||| Sbjct: 9485 acaaaactaatattaaagac 9504
>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2, complete sequence Length = 162145 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 acaaaactaatattaaagac 76 |||||||||||||||||||| Sbjct: 61561 acaaaactaatattaaagac 61580
>gb|BC110882.1| Homo sapiens PHD finger protein 12, mRNA (cDNA clone MGC:131914 IMAGE:6157238), complete cds Length = 3729 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 637 cactctccaggaggcaacat 618
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 tggtcgtcgtaggtgtcgatcgcc 327 ||||||||||||||| |||||||| Sbjct: 2504522 tggtcgtcgtaggtgacgatcgcc 2504545
>emb|AL161953.1|HSM802519 Homo sapiens mRNA; cDNA DKFZp434A1716 (from clone DKFZp434A1716) Length = 1935 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccaggaggcaacat 460 |||||||||||||||||||| Sbjct: 1101 cactctccaggaggcaacat 1082 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,376,396 Number of Sequences: 3902068 Number of extensions: 4376396 Number of successful extensions: 79737 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78893 Number of HSP's gapped (non-prelim): 834 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)