ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1j10 |
|---|---|
| Clone Library Name | barley_pub |
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 34.7 bits (78), Expect = 0.30 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%) Frame = +2 Query: 410 TPAMITPPMRVTRSAAHLKCRPTTM*EEDMNATVVHTEASHINLLITSTTRLSAFVSPLT 589 T ++ + P+ S T + +N+T + +S + STT SA +PLT Sbjct: 417 TSSVSSTPLSSANSTTATSASSTPL--SSVNSTTATSASSTPLSSVNSTTATSASSTPLT 474 Query: 590 SVIWTTTTA------NDVNKAMALKMKNTLKDNACTTIATPFSSLPP 712 SV TT T+ VN A +T +A +T +T SS P Sbjct: 475 SVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAP 521 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = +2 Query: 551 STTRLSAFVSPLTSVIWTTTTANDVNKAMALKMKNTLKDNACTTIATPFSSL 706 STT SA +PLTSV TTTT+ ++ N+ A +T +TP SS+ Sbjct: 297 STTATSASSTPLTSVNSTTTTSASSTPLSSVSSANS--TTATSTSSTPLSSV 346
>NRAM2_MOUSE (P49282) Natural resistance-associated macrophage protein 2 (NRAMP| 2) Length = 568 Score = 33.5 bits (75), Expect = 0.66 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Frame = -1 Query: 660 KVFFIFNAIALFTS--LAVVVVQITLVRGETKAERRVVEVINKL------MWLASVCTTV 505 K FFI + IALF S + V VV + K ++VVEV ++ + T Sbjct: 294 KYFFIESCIALFVSFIINVFVVSVFAEAFFEKTNKQVVEVCKNNSSPHADLFPSDNSTLA 353 Query: 504 AFISSSYIVVGRHFRWAALLVTLIGGVIMAGVLGTMT 394 I +V+G +F AAL + + G++ AG TMT Sbjct: 354 VDIYKGGVVLGCYFGPAALYIWAV-GILAAGQSSTMT 389
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = +2 Query: 407 STPAMITPPMRVTRSAAHLKCRPTTM*EEDMNATVVHTEASHINLLITSTTRLSAFVSPL 586 ST + T + T+S TT + T+ T +S I IT TT+ + Sbjct: 333 STSSASTSQKKTTQS--------TTSTQSKSKVTLSPTASSAIKTSITQTTKTLTSSTKT 384 Query: 587 TSVIWTTTTANDVNKAMALKMKNTLKDN-ACTTIATP 694 S + TTTT + +N MK TL + TP Sbjct: 385 KSSLGTTTTESTLNSVAITSMKTTLSSQITSAALVTP 421
>NRAM2_HUMAN (P49281) Natural resistance-associated macrophage protein 2 (NRAMP| 2) (Divalent metal transporter 1) (DMT1) Length = 568 Score = 32.3 bits (72), Expect = 1.5 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%) Frame = -1 Query: 660 KVFFIFNAIALFTS--LAVVVVQITLVRGETKAERRVVEVINKL------MWLASVCTTV 505 K FFI + IALF S + V VV + K +VVEV ++ T Sbjct: 294 KYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNSTLA 353 Query: 504 AFISSSYIVVGRHFRWAALLVTLIGGVIMAGVLGTMT 394 I +V+G +F AAL + + G++ AG TMT Sbjct: 354 VDIYKGGVVLGCYFGPAALYIWAV-GILAAGQSSTMT 389
>TRPP_CLOPE (P58725) Probable tryptophan transport protein| Length = 182 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/97 (21%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Frame = -1 Query: 648 IFNAIALFTSLAVVVVQITLVRGETKAERRVVEVINKLMWLASVCTTVAFISSSYIVVGR 469 IF A+ +F L + +++ + + G E+R ++ ++ L ++ + + F+ ++ I+VG Sbjct: 85 IFTALIVF--LFIALIKKSNILGRLSVEKRNNILMAIVLPLGTLVSGILFLGTAKIIVGL 142 Query: 468 HFRWAALLVT-LIGGVIMAGVLGTMTYYVVKSKRTRS 361 ++ L +T ++ V + V+G + Y +V+ R+ Sbjct: 143 PASFSILFLTVVVPSVALNTVIGLVLYRIVEKSLRRA 179
>NRAM2_RAT (O54902) Natural resistance-associated macrophage protein 2 (NRAMP| 2) (Metal ion transporter DCT1) Length = 568 Score = 32.0 bits (71), Expect = 1.9 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%) Frame = -1 Query: 660 KVFFIFNAIALFTS--LAVVVVQITLVRGETKAERRVVEVINKL------MWLASVCTTV 505 K FFI + IALF S + V VV + K +VVEV ++ T Sbjct: 294 KYFFIESCIALFVSFIINVFVVSVFAEAFFEKTNEQVVEVCRNSSSPHADLFPNDNSTLA 353 Query: 504 AFISSSYIVVGRHFRWAALLVTLIGGVIMAGVLGTMT 394 I +V+G +F AAL + + G++ AG TMT Sbjct: 354 VDIYKGGVVLGCYFGPAALYIWAV-GILAAGQSSTMT 389
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%) Frame = +1 Query: 397 HRTEHASHDHPTNEGHQKRRPPEVPTHHYVRGG---YECHRGAYRSQPHQ 537 H H H + EGH + EVP HH R G RG S P Q Sbjct: 577 HVASHPPPGHRSREGHAEEHQTEVPGHHQHRMGDTDTSAERGHPASSPRQ 626
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +1 Query: 346 HLLPN*TCALGLHHIVCHRTEHASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRS 525 H P+ L HH H+ +H +H HP + H ++ P HH+ H +++ Sbjct: 275 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHP----HHHSHSHLHAHPAHHQT 329 Query: 526 QPH 534 PH Sbjct: 330 SPH 332
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +1 Query: 346 HLLPN*TCALGLHHIVCHRTEHASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRS 525 H P+ L HH H+ +H +H HP + H ++ P HH+ H +++ Sbjct: 120 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHP----HHHSHSHLHAHPAHHQT 174 Query: 526 QPH 534 PH Sbjct: 175 SPH 177
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.8 bits (68), Expect = 4.3 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Frame = +1 Query: 409 HASHDHPTNEGHQKRRPPEVPTHH----YVRGGYECHRGAYRSQPHQLVDNLHNSPLC 570 H HD P + GH R PP H + GG+ H G H ++ N P+C Sbjct: 860 HRPHDVPGHRGHDHRGPPHEHRGHDGPGHGGGGHRGHDGG-----HSHGGDMSNRPVC 912
>SYI_PYRAE (Q8ZWU4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 981 Score = 30.8 bits (68), Expect = 4.3 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +1 Query: 394 CHRTEHASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRSQPHQLVDN 549 C R E + DH G+ +R P + V GG + + + + P +VDN Sbjct: 185 CPRCETSLSDHEVALGYDEREDPSIYVKFRVEGGVDEYLVIWTTTPWTIVDN 236
>DEC11_DROME (P18169) Defective chorion-1 protein, FC125 isoform precursor| Length = 1208 Score = 30.0 bits (66), Expect = 7.3 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +2 Query: 95 IEEHQLIGMYTVKPHIPTAPGGSKLFILSAIPPFFLHPCRVAPPKRPRIYR-PERSPHMA 271 + +HQ + T+ P P GGS+ ++ PP L P P+ R+++ P +P Sbjct: 936 LRQHQTMAR-TINPKQPGEVGGSESQKSNSNPPTTLTPAPQEQPQEHRVHKSPSSAPSET 994 Query: 272 YIRSISESDSEL 307 I + SD ++ Sbjct: 995 EIENAPSSDPQV 1006
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.6 bits (65), Expect = 9.6 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Frame = +1 Query: 409 HASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRSQP--HQLVDNLHNSPLC 570 H HD P + GH R PP P H G G +R H ++ N P+C Sbjct: 859 HRPHDVPGHRGHDHRGPP--PHEHRGHDGPGHGGGGHRGHDGGHSHGGDMSNRPVC 912
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.6 bits (65), Expect = 9.6 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Frame = +1 Query: 409 HASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRSQP--HQLVDNLHNSPLC 570 H HD P + GH R PP P H G G +R H ++ N P+C Sbjct: 859 HRPHDVPGHRGHDHRGPP--PHEHRGHDGPGHGGGGHRGHDGGHSHGGDMSNRPVC 912
>MQO_HAEDU (Q7VPC3) Probable malate:quinone oxidoreductase (EC 1.1.99.16)| (Malate dehydrogenase [acceptor]) (MQO) Length = 489 Score = 29.6 bits (65), Expect = 9.6 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1 Query: 444 VTLIGGVIMAGVLGTMTYYVVKSKRTRSIRKKVKSTRRSGSNSWNHNSESDSEI 283 +TLIG IM+ LGT+ +V K + +I +++ SN WN+ S + Sbjct: 12 ITLIGAGIMSATLGTLLAELVPHK-SITIFEQLAEVALESSNEWNNAGTGHSAL 64
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 29.6 bits (65), Expect = 9.6 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +2 Query: 488 EEDMNATVVHTEASHINLLITSTTR--LSAFVSPLTSVIWTTTTANDVNKAMALKMKNTL 661 EED+ +T TE + ITS + + +SP++S TT+N+ + +K + Sbjct: 1001 EEDVAST--KTELLTMETTITSCSGGICTTLMSPVSSFNSKATTSNNAESTIPKAIKVSC 1058 Query: 662 KDNACTTIAT 691 ACTT+ T Sbjct: 1059 SAGACTTLTT 1068
>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2| (Syn2)] Length = 1025 Score = 29.6 bits (65), Expect = 9.6 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Frame = +2 Query: 476 TTM*EEDMNATVVHTEASHIN--LLITSTTRLSAFVSPLTSVIWTTTTANDVNKAMALKM 649 T M N TEA + IT+ + V+P T I T+ T ND A+ ++ Sbjct: 792 TRMDTNTTNIGATATEAGEASGVTAITNISNSDGIVAPTTGTITTSVTTNDWRSAIGMRS 851 Query: 650 KNTLKDNACTTIATP 694 + A T P Sbjct: 852 ASVYSAPAAVTTVLP 866
>ATG9_YARLI (Q6C2F5) Autophagy-related protein 9| Length = 788 Score = 29.6 bits (65), Expect = 9.6 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +1 Query: 406 EHASHDHPTNEGHQKRRPPEVPTHHYVRGGYECHRGAYRSQPHQL--VDNLHNS 561 EHA +N + +VPT V G + G+ R QPH++ + NL +S Sbjct: 39 EHAQTSDNSNSDNDSGNDSDVPTSLMVEGVQDPKPGSKRRQPHRMATLSNLQSS 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 116,523,099 Number of Sequences: 219361 Number of extensions: 2689752 Number of successful extensions: 7824 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 7155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7694 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
