ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 432 e-118
2gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 432 e-118
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 432 e-118
4gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 432 e-118
5dbj|AK100495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
6ref|NM_111789.2| Arabidopsis thaliana protein binding AT3G09550 ... 62 3e-06
7gb|BT012564.1| Arabidopsis thaliana At3g09550 gene, complete cds 62 3e-06
8gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11... 62 3e-06
9ref|NM_190495.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
11dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
12gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence 42 2.5
13gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence 42 2.5
14gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 42 2.5
15gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, comp... 40 9.8
16emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 40 9.8
17emb|AJ421825.1|SAU421825 Stigmatella aurantiaca ORF8, ORF7, ORF6... 40 9.8
18emb|AL669897.15| Mouse DNA sequence from clone RP23-78H4 on chro... 40 9.8
19gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21... 40 9.8
20gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, comp... 40 9.8
21gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, c... 40 9.8
22emb|AL954226.2|PTB126M21 Pan troglodytes chromosome 22 BAC PTB-1... 40 9.8
23emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 40 9.8
24emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 40 9.8
25dbj|AK114784.1| Ciona intestinalis cDNA, clone:cieg017c10, full ... 40 9.8
26gb|AF121897.4| Homo sapiens chromosome 21 clone RP1-160L9 map 21... 40 9.8

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  432 bits (218), Expect = e-118
 Identities = 397/456 (87%), Gaps = 3/456 (0%)
 Strand = Plus / Minus

                                                                           
Query: 262     tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 318
               |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 9579958 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 9579899

                                                                           
Query: 319     gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 378
               ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 9579898 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 9579839

                                                                           
Query: 379     cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 438
                 ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 9579838 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 9579779

                                                                           
Query: 439     ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 498
               ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 9579778 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 9579719

                                                                           
Query: 499     gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 558
               ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 9579718 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 9579659

                                                                           
Query: 559     tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 618
                |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 9579658 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 9579599

                                                                           
Query: 619     tgatgtgaacaaggcgatggcattgaagatgaagaacaccttgaaggataacgcatgcac 678
               ||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||||||
Sbjct: 9579598 tgatgtgaacaaggcaatggcattgaagatgaagaagatcttgaaggatacggcatgcac 9579539

                                                   
Query: 679     aacgattgccacacctttctcatcgttaccacctgg 714
               | | |||||||| || || | |||||||||||||||
Sbjct: 9579538 agctattgccacgccgttgttatcgttaccacctgg 9579503



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 103     acaccagcttattggaatgtatac 126
               ||||||||||||||||| ||||||
Sbjct: 9580098 acaccagcttattggaacgtatac 9580075



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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence,
           complete sequence
          Length = 165113

 Score =  432 bits (218), Expect = e-118
 Identities = 397/456 (87%), Gaps = 3/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 262 tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 318
           |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 857 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 798

                                                                       
Query: 319 gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 378
           ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 797 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 738

                                                                       
Query: 379 cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 438
             ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 737 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 678

                                                                       
Query: 439 ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 498
           ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 677 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 618

                                                                       
Query: 499 gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 558
           ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 617 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 558

                                                                       
Query: 559 tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 618
            |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 557 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 498

                                                                       
Query: 619 tgatgtgaacaaggcgatggcattgaagatgaagaacaccttgaaggataacgcatgcac 678
           ||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||||||
Sbjct: 497 tgatgtgaacaaggcaatggcattgaagatgaagaagatcttgaaggatacggcatgcac 438

                                               
Query: 679 aacgattgccacacctttctcatcgttaccacctgg 714
           | | |||||||| || || | |||||||||||||||
Sbjct: 437 agctattgccacgccgttgttatcgttaccacctgg 402



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 103 acaccagcttattggaatgtatac 126
           ||||||||||||||||| ||||||
Sbjct: 997 acaccagcttattggaacgtatac 974



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  432 bits (218), Expect = e-118
 Identities = 397/456 (87%), Gaps = 3/456 (0%)
 Strand = Plus / Minus

                                                                           
Query: 262     tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 318
               |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 9578079 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 9578020

                                                                           
Query: 319     gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 378
               ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 9578019 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 9577960

                                                                           
Query: 379     cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 438
                 ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 9577959 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 9577900

                                                                           
Query: 439     ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 498
               ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 9577899 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 9577840

                                                                           
Query: 499     gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 558
               ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 9577839 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 9577780

                                                                           
Query: 559     tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 618
                |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 9577779 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 9577720

                                                                           
Query: 619     tgatgtgaacaaggcgatggcattgaagatgaagaacaccttgaaggataacgcatgcac 678
               ||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||||||
Sbjct: 9577719 tgatgtgaacaaggcaatggcattgaagatgaagaagatcttgaaggatacggcatgcac 9577660

                                                   
Query: 679     aacgattgccacacctttctcatcgttaccacctgg 714
               | | |||||||| || || | |||||||||||||||
Sbjct: 9577659 agctattgccacgccgttgttatcgttaccacctgg 9577624



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 103     acaccagcttattggaatgtatac 126
               ||||||||||||||||| ||||||
Sbjct: 9578219 acaccagcttattggaacgtatac 9578196



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>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score =  432 bits (218), Expect = e-118
 Identities = 397/456 (87%), Gaps = 3/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 262   tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 318
             |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 32728 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 32787

                                                                         
Query: 319   gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 378
             ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 32788 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 32847

                                                                         
Query: 379   cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 438
               ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 32848 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 32907

                                                                         
Query: 439   ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 498
             ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 32908 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 32967

                                                                         
Query: 499   gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 558
             ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 32968 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 33027

                                                                         
Query: 559   tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 618
              |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 33028 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 33087

                                                                         
Query: 619   tgatgtgaacaaggcgatggcattgaagatgaagaacaccttgaaggataacgcatgcac 678
             ||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||||||
Sbjct: 33088 tgatgtgaacaaggcaatggcattgaagatgaagaagatcttgaaggatacggcatgcac 33147

                                                 
Query: 679   aacgattgccacacctttctcatcgttaccacctgg 714
             | | |||||||| || || | |||||||||||||||
Sbjct: 33148 agctattgccacgccgttgttatcgttaccacctgg 33183



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   acaccagcttattggaatgtatac 126
             ||||||||||||||||| ||||||
Sbjct: 32588 acaccagcttattggaacgtatac 32611



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>dbj|AK100495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099A04, full
            insert sequence
          Length = 2618

 Score =  432 bits (218), Expect = e-118
 Identities = 397/456 (87%), Gaps = 3/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 262  tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 318
            |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 2256 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 2197

                                                                        
Query: 319  gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 378
            ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 2196 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 2137

                                                                        
Query: 379  cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 438
              ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 2136 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 2077

                                                                        
Query: 439  ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 498
            ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 2076 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 2017

                                                                        
Query: 499  gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 558
            ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 2016 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 1957

                                                                        
Query: 559  tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 618
             |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 1956 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 1897

                                                                        
Query: 619  tgatgtgaacaaggcgatggcattgaagatgaagaacaccttgaaggataacgcatgcac 678
            ||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||||||
Sbjct: 1896 tgatgtgaacaaggcaatggcattgaagatgaagaagatcttgaaggatacggcatgcac 1837

                                                
Query: 679  aacgattgccacacctttctcatcgttaccacctgg 714
            | | |||||||| || || | |||||||||||||||
Sbjct: 1836 agctattgccacgccgttgttatcgttaccacctgg 1801



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 103  acaccagcttattggaatgtatac 126
            ||||||||||||||||| ||||||
Sbjct: 2396 acaccagcttattggaacgtatac 2373



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>ref|NM_111789.2| Arabidopsis thaliana protein binding AT3G09550 mRNA, complete cds
          Length = 1730

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 469  ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 528
            |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 1359 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 1300

                                                                        
Query: 529  ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 588
            |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 1299 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 1240

                                                   
Query: 589  aagtgttatctggaccaccactactgctaatgatgtgaa 627
            ||| || || || || || ||||||||||| || |||||
Sbjct: 1239 aagcgtgatttgcacgacaactactgctaacgaagtgaa 1201



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>gb|BT012564.1| Arabidopsis thaliana At3g09550 gene, complete cds
          Length = 1311

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 469  ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 528
            |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 1095 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 1036

                                                                        
Query: 529  ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 588
            |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 1035 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 976

                                                   
Query: 589  aagtgttatctggaccaccactactgctaatgatgtgaa 627
            ||| || || || || || ||||||||||| || |||||
Sbjct: 975  aagcgtgatttgcacgacaactactgctaacgaagtgaa 937



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>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                         
Query: 469   ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 528
             |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 32356 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 32297

                                                                         
Query: 529   ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 588
             |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 32296 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 32237

                                                    
Query: 589   aagtgttatctggaccaccactactgctaatgatgtgaa 627
             ||| || || || || || ||||||||||| || |||||
Sbjct: 32236 aagcgtgatttgcacgacaactactgctaacgaagtgaa 32198



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>ref|NM_190495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1752

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 369  tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 420
            ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 1642 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 1591



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 104/131 (79%)
 Strand = Plus / Minus

                                                                        
Query: 524  gccagccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgccc 583
            ||||||||||| | ||||||||| ||||| |||||   |||||| |  || || || |||
Sbjct: 1487 gccagccacataagcttgttgatcacctcaacaaccttcctctcagacttagtttctccc 1428

                                                                        
Query: 584  ctaacaagtgttatctggaccaccactactgctaatgatgtgaacaaggcgatggcattg 643
            || ||||  |||||||| || || || || || |||||||| ||||  || || ||||||
Sbjct: 1427 ctgacaaccgttatctgaactacgaccaccgccaatgatgtaaacagagctatagcattg 1368

                       
Query: 644  aagatgaagaa 654
            |||||||||||
Sbjct: 1367 aagatgaagaa 1357



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 369      tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 420
                ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 35878630 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 35878681



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 104/131 (79%)
 Strand = Plus / Plus

                                                                            
Query: 524      gccagccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgccc 583
                ||||||||||| | ||||||||| ||||| |||||   |||||| |  || || || |||
Sbjct: 35878785 gccagccacataagcttgttgatcacctcaacaaccttcctctcagacttagtttctccc 35878844

                                                                            
Query: 584      ctaacaagtgttatctggaccaccactactgctaatgatgtgaacaaggcgatggcattg 643
                || ||||  |||||||| || || || || || |||||||| ||||  || || ||||||
Sbjct: 35878845 ctgacaaccgttatctgaactacgaccaccgccaatgatgtaaacagagctatagcattg 35878904

                           
Query: 644      aagatgaagaa 654
                |||||||||||
Sbjct: 35878905 aagatgaagaa 35878915



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>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 369    tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 420
              ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 143088 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 143139



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 104/131 (79%)
 Strand = Plus / Plus

                                                                          
Query: 524    gccagccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgccc 583
              ||||||||||| | ||||||||| ||||| |||||   |||||| |  || || || |||
Sbjct: 143243 gccagccacataagcttgttgatcacctcaacaaccttcctctcagacttagtttctccc 143302

                                                                          
Query: 584    ctaacaagtgttatctggaccaccactactgctaatgatgtgaacaaggcgatggcattg 643
              || ||||  |||||||| || || || || || |||||||| ||||  || || ||||||
Sbjct: 143303 ctgacaaccgttatctgaactacgaccaccgccaatgatgtaaacagagctatagcattg 143362

                         
Query: 644    aagatgaagaa 654
              |||||||||||
Sbjct: 143363 aagatgaagaa 143373



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>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence
          Length = 163065

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  aaagctgtttatactgagtgc 183
            |||||||||||||||||||||
Sbjct: 9909 aaagctgtttatactgagtgc 9929



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>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence
          Length = 169462

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 163   aaagctgtttatactgagtgc 183
             |||||||||||||||||||||
Sbjct: 92217 aaagctgtttatactgagtgc 92237



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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 537     acttgttgataacctccacaa 557
               |||||||||||||||||||||
Sbjct: 4473301 acttgttgataacctccacaa 4473321



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>gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, complete sequence
          Length = 227081

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    ggaatctgactccgagttgt 308
              ||||||||||||||||||||
Sbjct: 175618 ggaatctgactccgagttgt 175637



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>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tatacccacagcacctggag 158
             ||||||||||||||||||||
Sbjct: 76123 tatacccacagcacctggag 76142



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>emb|AJ421825.1|SAU421825 Stigmatella aurantiaca ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF2, ORF1,
             stiA gene, stiB gene, stiC gene, stiD gene, stiE gene,
             stiF gene, stiG gene, stiH gene, stiJ gene, stiK gene,
             stiL gene and ORF9
          Length = 66808

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    tctgctcctggctcctgccc 94
             ||||||||||||||||||||
Sbjct: 55508 tctgctcctggctcctgccc 55489



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>emb|AL669897.15| Mouse DNA sequence from clone RP23-78H4 on chromosome 11 Contains the
             Ywhae gene for tyrosine 3-monooxygenase/tryptophan
             5-monooxygenase activation protein epsilon polypeptide,
             the Doc2b gene for double C2 beta, a novl gene, the 3' end
             of the gene for a novel protein similar to rat
             rabphilin-3a related protein and two CpG islands, complete
             sequence
          Length = 178980

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 634   gatggcattgaagatgaagaacac 657
             ||||||| ||||||||||||||||
Sbjct: 94606 gatggcaatgaagatgaagaacac 94629



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>gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21q22.3, complete
            sequence
          Length = 170121

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  tatacccacagcacctggag 158
            ||||||||||||||||||||
Sbjct: 2714 tatacccacagcacctggag 2733



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>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence
          Length = 176226

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 accccatatacccacagcac 152
           ||||||||||||||||||||
Sbjct: 466 accccatatacccacagcac 485



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>gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, complete sequence
          Length = 198599

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   accccatatacccacagcac 152
             ||||||||||||||||||||
Sbjct: 57855 accccatatacccacagcac 57836



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>emb|AL954226.2|PTB126M21 Pan troglodytes chromosome 22 BAC PTB-126M21, complete sequence
          Length = 188320

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tatacccacagcacctggag 158
              ||||||||||||||||||||
Sbjct: 121185 tatacccacagcacctggag 121204



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>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttctgatgatcacaatctat 39
              ||||||||||||||||||||
Sbjct: 190892 ttctgatgatcacaatctat 190873



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>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ttctgatgatcacaatctat 39
             ||||||||||||||||||||
Sbjct: 93659 ttctgatgatcacaatctat 93640



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>dbj|AK114784.1| Ciona intestinalis cDNA, clone:cieg017c10, full insert sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 530  cacatcaacttgttgataac 549
            ||||||||||||||||||||
Sbjct: 1311 cacatcaacttgttgataac 1330



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>gb|AF121897.4| Homo sapiens chromosome 21 clone RP1-160L9 map 21q22.2, complete
             sequence
          Length = 132088

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tatacccacagcacctggag 158
             ||||||||||||||||||||
Sbjct: 80363 tatacccacagcacctggag 80382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,137,497
Number of Sequences: 3902068
Number of extensions: 5137497
Number of successful extensions: 87629
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87476
Number of HSP's gapped (non-prelim): 140
length of query: 714
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 691
effective length of database: 17,143,297,704
effective search space: 11846018713464
effective search space used: 11846018713464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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