| Clone Name | rbags29d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RF1_LACJO (Q74K25) Peptide chain release factor 1 (RF-1) | 30 | 6.9 | 2 | CPG2_PORGI (P95493) Gingipain R2 precursor (EC 3.4.22.37) (Gingi... | 30 | 9.1 |
|---|
>RF1_LACJO (Q74K25) Peptide chain release factor 1 (RF-1)| Length = 362 Score = 30.0 bits (66), Expect = 6.9 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = -1 Query: 525 DPLLFPAKAVAPFYEEVNVLELEPEILPDISRRLSISGDKAKLIEV 388 D ++ + + YEE+ + +PE++ D R + IS ++A + EV Sbjct: 2 DKVMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREV 47
>CPG2_PORGI (P95493) Gingipain R2 precursor (EC 3.4.22.37) (Gingipain 2)| (Arg-gingipain) (RGP-2) Length = 736 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 498 VAPFYEEVNVLELEPEILPDISRRLSISGDKAKLIEV 388 V F E VN+ E ILP +SR L++S +A +EV Sbjct: 68 VPTFTEGVNISEKGTPILPILSRSLAVSETRAMKVEV 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,379,225 Number of Sequences: 219361 Number of extensions: 1606802 Number of successful extensions: 3746 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3744 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)