ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28o08 |
|---|---|
| Clone Library Name | barley_pub |
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 36.6 bits (83), Expect = 0.056 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2 Query: 454 SSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPSLA 317 SS E ++PEQ P+G++ +EP GG P+AE DP++A Sbjct: 5 SSTEQRSPEQPPEGSSTPAEPEPSGGG---PSAEAAPDTTADPAIA 47
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 34.7 bits (78), Expect = 0.21 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 Query: 112 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKT 273 P S SP N+ R R S+ S T +++ S PQ +S+PP P T Sbjct: 514 PISQSPENESNDRRSRRYSVSERSFGSRTTKKLSTLQSAPQQQTSSSPPPPLLT 567
>FGD6_MOUSE (Q69ZL1) FYVE, RhoGEF and PH domain-containing protein 6| Length = 1399 Score = 33.9 bits (76), Expect = 0.36 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 169 TLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCP 348 T P S TS T QP +P+ SAPP +++ +S R +P+K Q H P Sbjct: 434 TQPLSLPKQVTSACTDQPPATCNPEVSAPPIQKESSSS---------RIIPKKPQRHSLP 484 Query: 349 SA 354 +A Sbjct: 485 AA 486
>104K_THEPA (P15711) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 924 Score = 33.5 bits (75), Expect = 0.47 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Frame = +1 Query: 85 QAPKSEDGN-----PASASPTNKIARSRDRHLDTLP-NSYQSSNTSYITSQPSVPQDPK- 243 +AP ++G+ P+ S ++K + P ++ S ++ +PS P+DPK Sbjct: 520 KAPGDKEGSEGHKGPSKGSDSSKEGKKPGSGKKPGPAREHKPSKIPTLSKKPSGPKDPKH 579 Query: 244 ASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARLQAAP 372 P PRK + +TA RP P+ Q+ + P + +P Sbjct: 580 PRDPKEPRK--SKSPRTASPTRRPSPKLPQLSKLPKSTSPRSP 620
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 33.5 bits (75), Expect = 0.47 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%) Frame = +1 Query: 88 APKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPT-- 261 +PK P +A+P +AR R P + +S P+ P P + +P T Sbjct: 544 SPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQ 603 Query: 262 --PRKTINSGDKTALI-----NNRPMPRKDQVHRCPSARLQAAP 372 PR+ + S + + P P + Q R P++ A+P Sbjct: 604 ALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASP 647
>ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 990 Score = 33.5 bits (75), Expect = 0.47 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +1 Query: 61 LQQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDP 240 L+ R +PK+ G + NK R R TLP ++ + Y+T +P P+D Sbjct: 400 LESRSTQEASPKAITGETIAP---NKTPREDARPPRTLPRAFSAK---YVTGEPPQPEDL 453 Query: 241 KASAPPTPRKTINS 282 + PPT +T +S Sbjct: 454 EKRVPPTMTRTPSS 467
>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog| (Intermediate chain 1) Length = 837 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = -2 Query: 460 ETSSPEAQTPEQQPDGATEASEPASEGGAW--EQPAAE 353 + P A++ EQQ +G A+E A+EGG EQP AE Sbjct: 670 QAEQPAAESGEQQAEGGEPATETATEGGEQQAEQPPAE 707
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +1 Query: 163 LDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 336 ++T + ++ +TS+ S P+ + P R +G K+ +I+ R PRK+Q+ Sbjct: 465 IETEQKEDKGEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSPRKNQI 522
>HXA9_AMBME (P50209) Homeobox protein Hox-A9 (Fragment)| Length = 143 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 8/69 (11%) Frame = +1 Query: 181 SYQSSNTSYITSQPSVPQDPKASA---PPTPRKTINSGDKTALINNRPM-----PRKDQV 336 ++ SS+T ++ S P D ++S P P +T SGDK A+ N P R + Sbjct: 21 TFDSSHTLSLSDYGSSPADKQSSEGAFPEAPAETEASGDKPAIDPNNPAANWLHARSTRK 80 Query: 337 HRCPSARLQ 363 RCP + Q Sbjct: 81 KRCPYTKHQ 89
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 112 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 264 P S SP N+ R R S+ S T + + S PQ +S+PP P Sbjct: 412 PISQSPENESNDRRSRRYSMSERSFGSRATKKLPTLQSAPQQKTSSSPPPP 462
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +1 Query: 112 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 264 PAS++ T+ SR + ++ P SS ++++S +P+DPK PP P Sbjct: 342 PASSAMTHLSGHSRLQARNSCPGPLDSS--AFLSSDFLLPEDPKPRLPPPP 390
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/81 (23%), Positives = 33/81 (40%) Frame = -2 Query: 577 DPALLVSDLKKKAEALDRFCKTIMXXXXXXXXXXXXXXAETSSPEAQTPEQQPDGATEAS 398 DP + VS++ K++ LD FC I+ P+A+ PE +P +E + Sbjct: 763 DPVVKVSEIVAKSKELDNFCNPIIY---------------KPKPKAEVPEDKPKANSEHN 807 Query: 397 EPASEGGAWEQPAAEQMDTDE 335 P E + D+ + Sbjct: 808 GPMDGQSGTETKSDSTKDSSQ 828
>LGT_MYCPA (P60972) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 427 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -2 Query: 460 ETSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPD 329 E++ P+ + PE + TEA+E ASE A E A E + +EP+ Sbjct: 335 ESAEPDVEKPESEE---TEAAEEASEPEAEEPEAPEAEEPEEPE 375 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 10/56 (17%) Frame = -2 Query: 460 ETSSPEAQTPE----QQPDGATEASEPASEGGAWEQP------AAEQMDTDEPDPS 323 E S PEA+ PE ++P+ E EP ++ G E+P A EQ+ +EP+P+ Sbjct: 354 EASEPEAEEPEAPEAEEPE-EPETEEPEADSG--EEPEEESGEAPEQLVAEEPEPA 406
>MED15_YEAST (P19659) RNA polymerase II mediator complex subunit 15 (Galactose| metabolism protein 11) (Basal expression activator protein 1) (Autonomous replication regulatory protein 3) (Defective silencing suppressor protein 4) (Ty insertion suppressor Length = 1081 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = +1 Query: 112 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQ----DPKASAPPTPRKTIN 279 P SA+ T + ++ ++ N SNT +TS PS + AS PTPR N Sbjct: 744 PVSAAATPSLNKT----INGKVNGRTKSNTIPVTSIPSTNKKLSISNAASQQPTPRSASN 799 Query: 280 SGDKTALINNRPMPRKDQ 333 + T N P P K Q Sbjct: 800 TAKSTP--NTNPSPLKTQ 815
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3664 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = -2 Query: 460 ETSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEP 332 E + P+A+ P+ D +A++ A + PA+E ++ D P Sbjct: 1768 EANEPKAEKPDATADAEPDANQKAEAAPESQPPASEDLEVDPP 1810
>SNX41_NEUCR (Q7SB54) Sorting nexin-41| Length = 604 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/81 (23%), Positives = 31/81 (38%) Frame = +1 Query: 205 YITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARLQAAPRXXX 384 Y++S + P PP + SG+ TA I++ P + PSA++ AP Sbjct: 429 YLSSSQQI--QPPRREPPAQHRRDGSGEDTASIDSDFPPTHSDFSQAPSAKI-GAPERTG 485 Query: 385 XXXXXXXXXXXXXXXXVFGPL 447 +FGP+ Sbjct: 486 GSPSHKKAASTSITNKIFGPI 506
>GRPB_RAT (P08462) Submandibular gland secretory Glx-rich protein CB| precursor (GRP-CB) (Contiguous repeat polypeptide) (CRP) Length = 247 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -2 Query: 457 TSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPS 323 TS E + +QQP A PA+ G EQ E + +PS Sbjct: 118 TSGSEEEQQQQQPTQAENQEPPATSGSEEEQQQQESTQAENQEPS 162
>DREB_CHICK (P18302) Drebrin (Developmentally-regulated brain protein)| Length = 651 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = -2 Query: 436 TPEQQPDGATEASEPASEGGAWEQPAAE----QMDTDEPDP 326 TP+ P +T+ +EPA+ W P E + DEPDP Sbjct: 401 TPKDSPSPSTQVAEPAATEQHWPFPGPEDKAAEPPGDEPDP 441
>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)| Length = 523 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +1 Query: 100 EDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQP-SVPQDPKASAPPT 261 +DG PA+ PT + R L + TS TS P SVP P PPT Sbjct: 390 QDGAPAAPVPTEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPPPPPPPT 444
>SELPL_MOUSE (Q62170) P-selectin glycoprotein ligand 1 precursor (PSGL-1)| (Selectin P ligand) Length = 397 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -2 Query: 460 ETSSP---EAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPSLA 317 ETS P EA T + P A E S+PA QPA + +T +P P+ A Sbjct: 163 ETSQPAPMEADTSKPAPTEA-ETSKPAPTEAETSQPAPNEAETSKPAPTEA 212 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -2 Query: 460 ETSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPSLA 317 + +S E +T + P A E S+PA QPA + DT +P P+ A Sbjct: 136 QPASTEVETSQPAPMEA-ETSQPAPMEAETSQPAPMEADTSKPAPTEA 182
>GRPA_RAT (P08568) Submandibular gland secretory Glx-rich protein CA| precursor (GRP-CA) Length = 246 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 457 TSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPS 323 TS E + +Q+P A + PA+ G EQ E + +PS Sbjct: 118 TSGSEEEQQQQEPTQAEDQQPPATSGSEEEQQQQESTQAENQEPS 162
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -2 Query: 454 SSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTD 338 S+P P+++ + T A+ P EG + PAAE++ D Sbjct: 816 SAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVD 854
>TAZ_DROME (Q9V6G5) Tafazzin homolog| Length = 378 Score = 30.0 bits (66), Expect = 5.2 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +1 Query: 115 ASASPTNKIARSRDRHLDTLPNSYQS-SNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 291 A A P + +R + P S Q + + T + S P+D + +PPTP +T+NS Sbjct: 38 AMARPYVQAPEARPVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNS--- 94 Query: 292 TALINNRPMPRKDQ 333 ++ P P DQ Sbjct: 95 ----SSLPPPMSDQ 104
>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid| receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A) Length = 1513 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 208 ITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPR 324 +TSQPS PQ P PPTP+ + + L +RP P+ Sbjct: 1467 VTSQPSPPQSP----PPTPQSPMQPLLPSPLHPHRPTPQ 1501
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +1 Query: 64 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 243 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 244 ASAPPTPRK 270 SAPP P + Sbjct: 111 QSAPPEPHR 119
>HEM2_SELMA (P45623) Delta-aminolevulinic acid dehydratase, chloroplast| precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (ALAD) Length = 417 Score = 30.0 bits (66), Expect = 5.2 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -3 Query: 411 PLKLVSRPVREVPGSSL----QPSRWTPMNLILPWHRPIVDQSSFISAIDCFSRCRW 253 PL+L SRP R ++L Q + TP N ILP ++ S I A+ SR W Sbjct: 89 PLRLTSRPRRNRKSAALRDAFQETTLTPANFILPLFIHEGEEDSPIGAMPGCSRLGW 145
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +1 Query: 64 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 243 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 244 ASAPPTPRK 270 SAPP P + Sbjct: 111 QSAPPEPHR 119
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 intergenic| region Length = 1140 Score = 29.6 bits (65), Expect = 6.8 Identities = 21/76 (27%), Positives = 34/76 (44%) Frame = +3 Query: 354 SAAGCSQAPPSLAGSLASVAPSGCCSGVWASGDEVSXXXXXXXXXXXXXXXMIVLQNLSS 533 S+ S+AP S + S++S APS S V S + S ++ +SS Sbjct: 377 SSVVSSEAPSSTSSSVSSEAPSSTSSSV--SSEAPSSTSSSVSSEISSTKSSVMSSEVSS 434 Query: 534 ASAFFLRSETRRAGSA 581 A++ + SE A S+ Sbjct: 435 ATSSLVSSEAPSAISS 450
>MLF3_YEAST (P32047) Protein MLF3 (Multicopy suppressor of leflunomide| sensitivity 3) Length = 452 Score = 29.6 bits (65), Expect = 6.8 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Frame = +1 Query: 91 PKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRK 270 P SE + ASP K++RS T P +NT T+ + + + + Sbjct: 175 PSSES---SPASPDLKLSRSHSHSAATRPTLNNINNTGMTTTTSNGEPNSRILRFYSYVD 231 Query: 271 TINSGDKTALINNRPM---PRKDQVHRCPSARLQAAPR 375 +N +K A NN P P K Q + CP ++ P+ Sbjct: 232 MLND-EKLAQANNTPTSRPPMKSQAYSCPFILKRSPPQ 268
>H82_NEIG1 (P11910) Outer membrane protein H.8 precursor| Length = 88 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -2 Query: 457 TSSPEAQTPEQQPDGATEASE--PASEGGAWEQPAAEQMDTDEP 332 T +P A+ P + A A+ PA+E A E PAAE T+ P Sbjct: 34 TEAPAAEAPAAEAPAAEAAAAEAPAAEAPAAEAPAAEAAATEAP 77
>SPTA3_HUMAN (Q8NHX4) Spermatogenesis-associated protein 3 (Testis spermatocyte| apoptosis-related protein 1) (Testis and spermatogenesis cell-related protein 1) Length = 183 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +1 Query: 157 RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 336 RH D+ S++TS S S PQ P + P ++ + + P P + Sbjct: 13 RHRDSTSQHASSNSTSQQPSPESTPQQPSPESTP-QHSSLETTSRQPAFQALPAPEIRRS 71 Query: 337 HRC---PSARLQAAPR 375 C P A ++AAP+ Sbjct: 72 SCCLLSPDANVKAAPQ 87
>TRP_DROME (P19334) Transient receptor potential protein| Length = 1275 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -2 Query: 460 ETSSPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPSL 320 E++ PEA +++ TEAS+PA+ GA + A +PD L Sbjct: 1080 ESAKPEAAAKKEE-SSKTEASKPAATNGAAKSAAPSAPSDAKPDSKL 1125
>GTI1_SCHPO (O14367) Gluconate transport inducer 1| Length = 720 Score = 29.3 bits (64), Expect = 8.9 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Frame = +1 Query: 175 PNSYQSSN--TSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNR-PMPRKD----- 330 P+S+ S +S T P VP+ P +S+P T + N+ +A IN R P R++ Sbjct: 190 PSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVS-NASTSSAPINPRAPQTRRESISST 248 Query: 331 -QVHRCPSARL 360 +H C S+ L Sbjct: 249 SSIHYCSSSSL 259
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 29.3 bits (64), Expect = 8.9 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 115 ASASPTNKIARSRD-RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 291 AS SP NKI+ S R D L S +N+S+ PQ K+ +PR + GD+ Sbjct: 90 ASTSPCNKISSSSSFRISDILEQS--PNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDR 147
>YTFB_ECOLI (P39310) Hypothetical protein ytfB| Length = 212 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = -2 Query: 436 TPEQQPDG-ATEASEPASEGGAWEQPAAEQMDTDEPDPSL 320 TP+ PD A A EP EG EQP Q +PD + Sbjct: 85 TPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGI 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,556,101 Number of Sequences: 219361 Number of extensions: 1449997 Number of successful extensions: 6436 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6403 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
