>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 474  gtctgtggcttcggtgctggctttggctttgtcatgatcgttttgcaaaatctgtcaagt 533
            |||||||||||||| ||||||||||| || |||||||||| |||||| || |||||||||
Sbjct: 1636 gtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctgtcaagt 1577

                                   
Query: 534  gcttccgccttcttcttgagatc 556
            ||||| || |||||||| |||||
Sbjct: 1576 gcttcagctttcttcttcagatc 1554

>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                       
Query: 474 gtctgtggcttcggtgctggctttggctttgtcatgatcgttttgcaaaatctgtcaagt 533
           |||||||||||||| ||||||||||| || |||||||||| |||||| || |||||||||
Sbjct: 814 gtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctgtcaagt 755

                                  
Query: 534 gcttccgccttcttcttgagatc 556
           ||||| || |||||||| |||||
Sbjct: 754 gcttcagctttcttcttcagatc 732

>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 471  ggggtctgtggcttcggtgctggctttggctttgtcatgatcgttttgcaaaatctgtca 530
            |||||||||||||||||||| || || ||||||| ||| |||| | ||||  | ||||||
Sbjct: 2555 ggggtctgtggcttcggtgcaggtttcggctttgacataatcggtctgcacgacctgtca 2496

                                
Query: 531  agtgcttccgccttcttctt 550
            |||||||| || ||||||||
Sbjct: 2495 agtgcttcagctttcttctt 2476

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 471     ggggtctgtggcttcggtgctggctttggctttgtcatgatcg 513
               |||||||||||||||||||| || || ||||||| ||| ||||
Sbjct: 4825287 ggggtctgtggcttcggtgcaggtttcggctttgacataatcg 4825245

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 471   ggggtctgtggcttcggtgctggctttggctttgtcatgatcg 513
             |||||||||||||||||||| || || ||||||| ||| ||||
Sbjct: 97695 ggggtctgtggcttcggtgcaggtttcggctttgacataatcg 97653

>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 489     gctggctttggctttgtcatg 509
               |||||||||||||||||||||
Sbjct: 2962345 gctggctttggctttgtcatg 2962365

>ref|XM_548101.2| PREDICTED: Canis familiaris similar to Keratin, type I cytoskeletal
           16 (Cytokeratin 16) (K16) (CK 16) (LOC490978), mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 479 tggcttcggtgctggctttgg 499
           |||||||||||||||||||||
Sbjct: 288 tggcttcggtgctggctttgg 308

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 489     gctggctttggctttgtcatg 509
               |||||||||||||||||||||
Sbjct: 2909299 gctggctttggctttgtcatg 2909319

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 489     gctggctttggctttgtcatg 509
               |||||||||||||||||||||
Sbjct: 3049605 gctggctttggctttgtcatg 3049625

>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 567   agagcagggtcagcatgcttt 587
             |||||||||||||||||||||
Sbjct: 77132 agagcagggtcagcatgcttt 77152

>dbj|AK042325.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630082H19 product:ubiquitin conjugating
           enzyme 7 interacting protein 3, full insert sequence
          Length = 1536

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 144 caggtccagggacaggcacct 164
           |||||||||||||||||||||
Sbjct: 217 caggtccagggacaggcacct 237

>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete
              sequence
          Length = 193718

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    caggtccagggacaggcacct 164
              |||||||||||||||||||||
Sbjct: 190055 caggtccagggacaggcacct 190035

>ref|NM_184576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 ctgctcggctgcaggctgct 369
           ||||||||||||||||||||
Sbjct: 100 ctgctcggctgcaggctgct 119

>gb|AE004209.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 117
            of 251 of the complete chromosome
          Length = 10134

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 491  tggctttggctttgtcatga 510
            ||||||||||||||||||||
Sbjct: 1873 tggctttggctttgtcatga 1892

>gb|AC022419.7| Homo sapiens chromosome 5 clone CTD-2026L11, complete sequence
          Length = 104351

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 369   tcccaggcacctccctcactggcc 392
             |||||||| |||||||||||||||
Sbjct: 23551 tcccaggctcctccctcactggcc 23574

>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete
           sequence
          Length = 207424

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 ctgcaggctgctcccaggca 377
           ||||||||||||||||||||
Sbjct: 413 ctgcaggctgctcccaggca 432

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ctgctcggctgcaggctgct 369
              ||||||||||||||||||||
Sbjct: 990635 ctgctcggctgcaggctgct 990616

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 253      ccaccgacaccgcgaaaaac 272
                ||||||||||||||||||||
Sbjct: 19440316 ccaccgacaccgcgaaaaac 19440297

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 350      ctgctcggctgcaggctgct 369
                ||||||||||||||||||||
Sbjct: 16297083 ctgctcggctgcaggctgct 16297102

>gb|AC026797.3|AC026797 Homo sapiens chromosome 5 clone CTD-2299N12, complete sequence
          Length = 172043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 369    tcccaggcacctccctcactggcc 392
              |||||||| |||||||||||||||
Sbjct: 131154 tcccaggctcctccctcactggcc 131131

>gb|AC093904.3| Homo sapiens BAC clone RP11-734K21 from 2, complete sequence
          Length = 191827

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   tgtcaagtgcttccgccttc 545
             ||||||||||||||||||||
Sbjct: 28177 tgtcaagtgcttccgccttc 28158

>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0409B11
          Length = 168354

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ccaccgacaccgcgaaaaac 272
              ||||||||||||||||||||
Sbjct: 129854 ccaccgacaccgcgaaaaac 129835

>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0646B04
          Length = 178896

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ctgctcggctgcaggctgct 369
              ||||||||||||||||||||
Sbjct: 154762 ctgctcggctgcaggctgct 154743

>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008D07
          Length = 156874

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ctgctcggctgcaggctgct 369
             ||||||||||||||||||||
Sbjct: 59160 ctgctcggctgcaggctgct 59179

>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1134_E08
          Length = 153002

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ctgctcggctgcaggctgct 369
             ||||||||||||||||||||
Sbjct: 28328 ctgctcggctgcaggctgct 28309

>emb|BX538340.1|HSM806614 Homo sapiens mRNA; cDNA DKFZp686B22215 (from clone DKFZp686B22215)
          Length = 3287

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 526  tgtcaagtgcttccgccttc 545
            ||||||||||||||||||||
Sbjct: 1285 tgtcaagtgcttccgccttc 1266

>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence
          Length = 182809

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   ctgcaggctgctcccaggca 377
             ||||||||||||||||||||
Sbjct: 56788 ctgcaggctgctcccaggca 56769

>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 557    agaaacaaggagagcagggt 576
              ||||||||||||||||||||
Sbjct: 130238 agaaacaaggagagcagggt 130257

>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   agaaacaaggagagcagggt 576
             ||||||||||||||||||||
Sbjct: 14329 agaaacaaggagagcagggt 14348


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,044,771
Number of Sequences: 3902068
Number of extensions: 5044771
Number of successful extensions: 111690
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111502
Number of HSP's gapped (non-prelim): 188
length of query: 590
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 567
effective length of database: 17,143,297,704
effective search space: 9720249798168
effective search space used: 9720249798168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)