ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28o05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphod... 150 5e-36
2GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphod... 147 2e-35
3GLPQ_ECOLI (P09394) Glycerophosphoryl diester phosphodiesterase ... 37 0.073
4MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic ... 32 1.4
5CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 32 1.8
6MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated prote... 31 3.1
7MAF_AVIS4 (P23091) Transforming protein Maf 31 3.1
8CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 31 4.0
9YKZ8_YEAST (P36114) Protein YKR018C 31 4.0
10YJI2_YEAST (P47031) Hypothetical 82.5 kDa protein in EXO70-ARP4 ... 30 5.2
11CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin ... 30 5.2
12QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase... 30 5.2
13CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1) 30 5.2
14CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1) 30 5.2
15MRG15_DROME (Q9Y0I1) Protein MRG15 30 5.2
16MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated prote... 30 5.2
17PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2... 30 6.8
18IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1) 30 8.9
19CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c... 30 8.9
20HISX_OCEIH (Q8ESR8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH) 30 8.9

>GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1|
            precursor (EC 3.1.4.46)
          Length = 766

 Score =  150 bits (378), Expect = 5e-36
 Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
 Frame = -3

Query: 680  KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVY 501
            K++E ++D   +++ DIKKFADAV +S KSV+P + +F T QT  LV+ LQ   LPVYV 
Sbjct: 565  KVEETIRDILDTAIEDIKKFADAVVISKKSVFPTSESFTTGQTK-LVERLQKFQLPVYVE 623

Query: 500  LLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCRKMGDKT 321
            +  NEF+SQP+DFF+DAT +IN+     V G G++G IT+FP TA RYK NSC    D  
Sbjct: 624  VFRNEFVSQPWDFFADATVEINS----HVTGAGINGTITEFPLTAARYKRNSCLTRKD-V 678

Query: 320  PYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVS---NTTGPAPSHAA 150
            P YM+P Q  GLL ++             PV TD+DV EPPLPPVS    TT P P    
Sbjct: 679  PPYMIPVQPAGLLTIV-SPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTPGPQSTG 737

Query: 149  SR 144
             +
Sbjct: 738  EK 739



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = -3

Query: 644 SLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQPYD 465
           +L  +K FA  V V    ++P  S +L  +T+  V+    AGL VY     N+F    Y+
Sbjct: 257 NLTFLKTFASGVLVPKSYIWPIESQYLLPRTS-FVQDAHKAGLEVYASGFGNDF-DLAYN 314

Query: 464 FFSDATAQINALVHKGVEGGGVDGLITDFPGTA 366
           +  D  A+  + +  G     VDGL++DFP TA
Sbjct: 315 YSFDPLAEYLSFMDNG--DFSVDGLLSDFPLTA 345



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>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2|
            precursor (EC 3.1.4.46)
          Length = 759

 Score =  147 bits (372), Expect = 2e-35
 Identities = 86/184 (46%), Positives = 113/184 (61%)
 Frame = -3

Query: 680  KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVY 501
            K++E ++D   S++ DIKKFADAV +   SV+P   +F+T QTN +V+ LQ + LPVYV 
Sbjct: 558  KVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVAQSFITTQTN-VVEKLQKSQLPVYVE 616

Query: 500  LLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCRKMGDKT 321
            L  NEFLSQPYDFF+DAT +IN+     + G G++G IT+FP TA RYK N C    +  
Sbjct: 617  LFQNEFLSQPYDFFADATVEINSY----ITGAGINGTITEFPFTAARYKRNLCLGRKETI 672

Query: 320  PYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVSNTTGPAPSHAASRI 141
            P YM P Q G LL ++             PV TD+DV EPPLPPV   T  AP+ +    
Sbjct: 673  P-YMAPAQPGALLTLV-SPTAFPPAEAPNPVFTDADVTEPPLPPV---TAKAPTSSPGTP 727

Query: 140  RTDA 129
             T+A
Sbjct: 728  STNA 731



 Score = 37.7 bits (86), Expect = 0.033
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -3

Query: 647 SSLADIKKFADAVSVSIKSVYP-ETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQP 471
           S+L  +K FA  + V    + P +   +L   T+ LV+    AGL V+V    N+ +   
Sbjct: 250 SNLTFVKTFASGILVPKSYILPLDDQQYLLPHTS-LVQDAHKAGLEVFVSGFAND-IDIA 307

Query: 470 YDFFSDATAQINALVHKGVEGGGVDGLITDFPGTA 366
           +D+  D  ++  + V  G     VDG+++DFP TA
Sbjct: 308 HDYSFDPVSEYLSFVDNG--NFSVDGVLSDFPITA 340



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>GLPQ_ECOLI (P09394) Glycerophosphoryl diester phosphodiesterase precursor (EC|
           3.1.4.46) (Glycerophosphodiester phosphodiesterase)
          Length = 358

 Score = 36.6 bits (83), Expect = 0.073
 Identities = 25/98 (25%), Positives = 46/98 (46%)
 Frame = -3

Query: 650 PSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQP 471
           P ++  + ++AD +      +  ETS     +   +V+  Q   L V+ Y + ++ L   
Sbjct: 264 PGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLP-- 321

Query: 470 YDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRY 357
            ++  D     +AL +K     GV+GL TDFP  A ++
Sbjct: 322 -EYTPDVNQLYDALYNK----AGVNGLFTDFPDKAVKF 354



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>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein|
           (Suppressor-mutator system protein) (SPM)
          Length = 621

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 1   PQILVQPNQKEK*IARYIEQVAEKNGPQS 87
           P+IL   N  EK +ARYI+ V EKNGP +
Sbjct: 365 PEILNDSNATEK-LARYIDNVREKNGPDT 392



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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -2

Query: 351 ELVQEDGGQDALLHAASPARRPP----WGHTG*SSIATSNGPNAGVDGLGRGGAAPSS 190
           E+++E+ G+D L  AAS AR  P     G  G + +  S G  AGV   G GG+  SS
Sbjct: 13  EILEEESGKDVLGSAASGARLSPSRTSEGSAGSAGMGGS-GAGAGVGAGGGGGSGASS 69



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>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 249 SNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDAA 115
           +N  + G+ G G+G + P S  QH  +G  P  L +T  RR+ A+
Sbjct: 283 ANLTHLGIGGAGQGMSTPGSSPQHRPAGVSPLSL-STEARRQQAS 326



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>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 23/75 (30%), Positives = 27/75 (36%)
 Frame = -2

Query: 390 HHRFPRDGP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGR 211
           HH  P  G           GG     H A+P   PP       S A+S+   +G  G G 
Sbjct: 177 HHHHPHHGG---------GGGGGGHPHGAAPGSAPP-------SSASSSAAGSGGGGGGG 220

Query: 210 GGAAPSSCEQHHRSG 166
           GG A      HH  G
Sbjct: 221 GGGAGGLHHPHHGGG 235



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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 351 ELVQEDGGQDALLHAASPAR-RPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHH 175
           E+++E+ G++ L  AAS AR  P   + G +  A   G  AG  G+G GG   S      
Sbjct: 13  EILEEESGKEVLGSAASGARLSPSRTNEGSAGSAGMGGSGAGA-GVGAGGGGGSGASSGG 71

Query: 174 RSGAL 160
            +G L
Sbjct: 72  GAGGL 76



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>YKZ8_YEAST (P36114) Protein YKR018C|
          Length = 725

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 387 DESIHSPSLYTFVHKGINLCRGI*EEVIRLRKELVHQQID-IDWKASRLQGL 539
           D  +   ++  FVH G+NLC GI + VI L    +   +  + ++ SR +GL
Sbjct: 278 DIDLSQATIDEFVHSGVNLCFGILQVVISLLPPAIGAVLSVVGFRGSREEGL 329



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>YJI2_YEAST (P47031) Hypothetical 82.5 kDa protein in EXO70-ARP4 intergenic|
           region
          Length = 731

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 387 DESIHSPSLYTFVHKGINLCRGI*EEVIRLRKELVHQQIDI-DWKASRLQGL 539
           D  +   ++  F+H G NLC GI + V+ L    +   + I  +K SR +GL
Sbjct: 276 DFDLEQATIDEFIHSGANLCYGILQVVLSLLPPAIGAVLSIVGFKGSREEGL 327



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>CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin sulfate|
           proteoglycan 3) (245 kDa early postnatal core
           glycoprotein) [Contains: 150 kDa adult core
           glycoprotein]
          Length = 1257

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 32/111 (28%), Positives = 41/111 (36%)
 Frame = -2

Query: 549 SSCQVPAVCWPSSLCLSADERVPFSAV*LLLRCHGTD*CPCAQRCRGRGSGWTHHRFPRD 370
           SS  VP+   PSSL +  +E  P           GT   P     RGR  G     F + 
Sbjct: 447 SSTGVPS---PSSLGVDMEETTP----------SGTQVAPTPTMRRGRFKGLNGRHFQQQ 493

Query: 369 GP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGL 217
           GP            +D LL AA  + +PP         A   GP+A  + L
Sbjct: 494 GP------------EDQLLEAAEASAQPPTLEV----TADHMGPSAATEAL 528



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>QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 347

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 488 EFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDF 378
           E + Q +D F + +   +  ++ G E  G+DGLIT+F
Sbjct: 261 ETIRQEHDEFVETSGWTSIFIYPGYEFKGIDGLITNF 297



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>CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)|
          Length = 203

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -3

Query: 203 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 120
           PP  P++  +GPAPSHA    + R+R DA  +
Sbjct: 63  PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94



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>CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1)|
          Length = 203

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -3

Query: 203 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 120
           PP  P++  +GPAPSHA    + R+R DA  +
Sbjct: 63  PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94



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>MRG15_DROME (Q9Y0I1) Protein MRG15|
          Length = 424

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
 Frame = -3

Query: 227 LTDSDVAEPPLPPVSN----TTGPAP 162
           LT SDVAE PLPP +     TT PAP
Sbjct: 217 LTGSDVAEKPLPPTTTPSTPTTEPAP 242



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>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog|
          Length = 630

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -2

Query: 264 SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDA 118
           SS +T +  + GV G G+G   PSS  QH  +   P  L +T  RR+ A
Sbjct: 274 SSSSTGSLAHLGVGGAGQGMNTPSSSPQHRPAVVSPLSL-STEARRQQA 321



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>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2|
           (Brain-specific homeobox/POU domain protein 3B) (Brn-3B)
           (Brn-3.2)
          Length = 411

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 315 LHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSG 166
           LH+ASP    P   +  S  ++SN    G  G G GG   SS      SG
Sbjct: 29  LHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGRSSSSSSSGSG 78



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>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)|
          Length = 1242

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 79   PQSQISREAHSTSSITPASVRILEAAWEGAGPVVLLTGGRGGSATSESV 225
            PQ    R +  T S TP++ R+      GAG  V   GG G S++SE V
Sbjct: 1092 PQGCRRRHSSETFSSTPSATRVGNTVPFGAGAAV--GGGGGSSSSSEDV 1138



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>CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c-551|
           (Cytochrome c551)
          Length = 206

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
 Frame = -3

Query: 188 VSNTTG--PAPSHAA--SRIRTDAGVMLLVLCASLLI 90
           VS  TG  PAP+H+A  + +R+  G  LL+ CASL+I
Sbjct: 27  VSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLII 63



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>HISX_OCEIH (Q8ESR8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 427

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 680 KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPL 543
           K+D  + DA  ++  +I+++   +  S  S+ PET   L  Q NPL
Sbjct: 72  KVDSTLLDALETAAGNIQRYQSEMLESNWSITPETGVKLGQQVNPL 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,397,300
Number of Sequences: 219361
Number of extensions: 2082279
Number of successful extensions: 7329
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7319
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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