| Clone Name | rbags28o05 |
|---|---|
| Clone Library Name | barley_pub |
>GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1| precursor (EC 3.1.4.46) Length = 766 Score = 150 bits (378), Expect = 5e-36 Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 3/182 (1%) Frame = -3 Query: 680 KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVY 501 K++E ++D +++ DIKKFADAV +S KSV+P + +F T QT LV+ LQ LPVYV Sbjct: 565 KVEETIRDILDTAIEDIKKFADAVVISKKSVFPTSESFTTGQTK-LVERLQKFQLPVYVE 623 Query: 500 LLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCRKMGDKT 321 + NEF+SQP+DFF+DAT +IN+ V G G++G IT+FP TA RYK NSC D Sbjct: 624 VFRNEFVSQPWDFFADATVEINS----HVTGAGINGTITEFPLTAARYKRNSCLTRKD-V 678 Query: 320 PYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVS---NTTGPAPSHAA 150 P YM+P Q GLL ++ PV TD+DV EPPLPPVS TT P P Sbjct: 679 PPYMIPVQPAGLLTIV-SPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTPGPQSTG 737 Query: 149 SR 144 + Sbjct: 738 EK 739 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/93 (33%), Positives = 47/93 (50%) Frame = -3 Query: 644 SLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQPYD 465 +L +K FA V V ++P S +L +T+ V+ AGL VY N+F Y+ Sbjct: 257 NLTFLKTFASGVLVPKSYIWPIESQYLLPRTS-FVQDAHKAGLEVYASGFGNDF-DLAYN 314 Query: 464 FFSDATAQINALVHKGVEGGGVDGLITDFPGTA 366 + D A+ + + G VDGL++DFP TA Sbjct: 315 YSFDPLAEYLSFMDNG--DFSVDGLLSDFPLTA 345
>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2| precursor (EC 3.1.4.46) Length = 759 Score = 147 bits (372), Expect = 2e-35 Identities = 86/184 (46%), Positives = 113/184 (61%) Frame = -3 Query: 680 KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVY 501 K++E ++D S++ DIKKFADAV + SV+P +F+T QTN +V+ LQ + LPVYV Sbjct: 558 KVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVAQSFITTQTN-VVEKLQKSQLPVYVE 616 Query: 500 LLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCRKMGDKT 321 L NEFLSQPYDFF+DAT +IN+ + G G++G IT+FP TA RYK N C + Sbjct: 617 LFQNEFLSQPYDFFADATVEINSY----ITGAGINGTITEFPFTAARYKRNLCLGRKETI 672 Query: 320 PYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVSNTTGPAPSHAASRI 141 P YM P Q G LL ++ PV TD+DV EPPLPPV T AP+ + Sbjct: 673 P-YMAPAQPGALLTLV-SPTAFPPAEAPNPVFTDADVTEPPLPPV---TAKAPTSSPGTP 727 Query: 140 RTDA 129 T+A Sbjct: 728 STNA 731 Score = 37.7 bits (86), Expect = 0.033 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = -3 Query: 647 SSLADIKKFADAVSVSIKSVYP-ETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQP 471 S+L +K FA + V + P + +L T+ LV+ AGL V+V N+ + Sbjct: 250 SNLTFVKTFASGILVPKSYILPLDDQQYLLPHTS-LVQDAHKAGLEVFVSGFAND-IDIA 307 Query: 470 YDFFSDATAQINALVHKGVEGGGVDGLITDFPGTA 366 +D+ D ++ + V G VDG+++DFP TA Sbjct: 308 HDYSFDPVSEYLSFVDNG--NFSVDGVLSDFPITA 340
>GLPQ_ECOLI (P09394) Glycerophosphoryl diester phosphodiesterase precursor (EC| 3.1.4.46) (Glycerophosphodiester phosphodiesterase) Length = 358 Score = 36.6 bits (83), Expect = 0.073 Identities = 25/98 (25%), Positives = 46/98 (46%) Frame = -3 Query: 650 PSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPLVKSLQSAGLPVYVYLLMNEFLSQP 471 P ++ + ++AD + + ETS + +V+ Q L V+ Y + ++ L Sbjct: 264 PGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLP-- 321 Query: 470 YDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRY 357 ++ D +AL +K GV+GL TDFP A ++ Sbjct: 322 -EYTPDVNQLYDALYNK----AGVNGLFTDFPDKAVKF 354
>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein| (Suppressor-mutator system protein) (SPM) Length = 621 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 1 PQILVQPNQKEK*IARYIEQVAEKNGPQS 87 P+IL N EK +ARYI+ V EKNGP + Sbjct: 365 PEILNDSNATEK-LARYIDNVREKNGPDT 392
>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1355 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -2 Query: 351 ELVQEDGGQDALLHAASPARRPP----WGHTG*SSIATSNGPNAGVDGLGRGGAAPSS 190 E+++E+ G+D L AAS AR P G G + + S G AGV G GG+ SS Sbjct: 13 EILEEESGKDVLGSAASGARLSPSRTSEGSAGSAGMGGS-GAGAGVGAGGGGGSGASS 69
>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1| (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) Length = 634 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -2 Query: 249 SNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDAA 115 +N + G+ G G+G + P S QH +G P L +T RR+ A+ Sbjct: 283 ANLTHLGIGGAGQGMSTPGSSPQHRPAGVSPLSL-STEARRQQAS 326
>MAF_AVIS4 (P23091) Transforming protein Maf| Length = 369 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/75 (30%), Positives = 27/75 (36%) Frame = -2 Query: 390 HHRFPRDGP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGR 211 HH P G GG H A+P PP S A+S+ +G G G Sbjct: 177 HHHHPHHGG---------GGGGGGHPHGAAPGSAPP-------SSASSSAAGSGGGGGGG 220 Query: 210 GGAAPSSCEQHHRSG 166 GG A HH G Sbjct: 221 GGGAGGLHHPHHGGG 235
>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) (rCAPS) Length = 1289 Score = 30.8 bits (68), Expect = 4.0 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = -2 Query: 351 ELVQEDGGQDALLHAASPAR-RPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHH 175 E+++E+ G++ L AAS AR P + G + A G AG G+G GG S Sbjct: 13 EILEEESGKEVLGSAASGARLSPSRTNEGSAGSAGMGGSGAGA-GVGAGGGGGSGASSGG 71 Query: 174 RSGAL 160 +G L Sbjct: 72 GAGGL 76
>YKZ8_YEAST (P36114) Protein YKR018C| Length = 725 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +3 Query: 387 DESIHSPSLYTFVHKGINLCRGI*EEVIRLRKELVHQQID-IDWKASRLQGL 539 D + ++ FVH G+NLC GI + VI L + + + ++ SR +GL Sbjct: 278 DIDLSQATIDEFVHSGVNLCFGILQVVISLLPPAIGAVLSVVGFRGSREEGL 329
>YJI2_YEAST (P47031) Hypothetical 82.5 kDa protein in EXO70-ARP4 intergenic| region Length = 731 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 387 DESIHSPSLYTFVHKGINLCRGI*EEVIRLRKELVHQQIDI-DWKASRLQGL 539 D + ++ F+H G NLC GI + V+ L + + I +K SR +GL Sbjct: 276 DFDLEQATIDEFIHSGANLCYGILQVVLSLLPPAIGAVLSIVGFKGSREEGL 327
>CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) (245 kDa early postnatal core glycoprotein) [Contains: 150 kDa adult core glycoprotein] Length = 1257 Score = 30.4 bits (67), Expect = 5.2 Identities = 32/111 (28%), Positives = 41/111 (36%) Frame = -2 Query: 549 SSCQVPAVCWPSSLCLSADERVPFSAV*LLLRCHGTD*CPCAQRCRGRGSGWTHHRFPRD 370 SS VP+ PSSL + +E P GT P RGR G F + Sbjct: 447 SSTGVPS---PSSLGVDMEETTP----------SGTQVAPTPTMRRGRFKGLNGRHFQQQ 493 Query: 369 GP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGL 217 GP +D LL AA + +PP A GP+A + L Sbjct: 494 GP------------EDQLLEAAEASAQPPTLEV----TADHMGPSAATEAL 528
>QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 347 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 488 EFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDF 378 E + Q +D F + + + ++ G E G+DGLIT+F Sbjct: 261 ETIRQEHDEFVETSGWTSIFIYPGYEFKGIDGLITNF 297
>CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)| Length = 203 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = -3 Query: 203 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 120 PP P++ +GPAPSHA + R+R DA + Sbjct: 63 PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94
>CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1)| Length = 203 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = -3 Query: 203 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 120 PP P++ +GPAPSHA + R+R DA + Sbjct: 63 PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94
>MRG15_DROME (Q9Y0I1) Protein MRG15| Length = 424 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%) Frame = -3 Query: 227 LTDSDVAEPPLPPVSN----TTGPAP 162 LT SDVAE PLPP + TT PAP Sbjct: 217 LTGSDVAEKPLPPTTTPSTPTTEPAP 242
>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog| Length = 630 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -2 Query: 264 SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDA 118 SS +T + + GV G G+G PSS QH + P L +T RR+ A Sbjct: 274 SSSSTGSLAHLGVGGAGQGMNTPSSSPQHRPAVVSPLSL-STEARRQQA 321
>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2) Length = 411 Score = 30.0 bits (66), Expect = 6.8 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 315 LHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSG 166 LH+ASP P + S ++SN G G G GG SS SG Sbjct: 29 LHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGRSSSSSSSGSG 78
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 29.6 bits (65), Expect = 8.9 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 79 PQSQISREAHSTSSITPASVRILEAAWEGAGPVVLLTGGRGGSATSESV 225 PQ R + T S TP++ R+ GAG V GG G S++SE V Sbjct: 1092 PQGCRRRHSSETFSSTPSATRVGNTVPFGAGAAV--GGGGGSSSSSEDV 1138
>CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c-551| (Cytochrome c551) Length = 206 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 4/37 (10%) Frame = -3 Query: 188 VSNTTG--PAPSHAA--SRIRTDAGVMLLVLCASLLI 90 VS TG PAP+H+A + +R+ G LL+ CASL+I Sbjct: 27 VSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLII 63
>HISX_OCEIH (Q8ESR8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 427 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = -3 Query: 680 KIDEEVKDAAPSSLADIKKFADAVSVSIKSVYPETSNFLTNQTNPL 543 K+D + DA ++ +I+++ + S S+ PET L Q NPL Sbjct: 72 KVDSTLLDALETAAGNIQRYQSEMLESNWSITPETGVKLGQQVNPL 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,397,300 Number of Sequences: 219361 Number of extensions: 2082279 Number of successful extensions: 7329 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 6890 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7319 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)