>gb|BT017457.1| Zea mays clone EL01N0407C01.c mRNA sequence
          Length = 645

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 250 atctagagaaggtcggcgacattggccgggagctcctcaa 289
           ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 416 atctagagaaggtcggcgacattggccggcagctcctcaa 377

>gb|AY109160.1| Zea mays PCO074340 mRNA sequence
          Length = 1609

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 250  atctagagaaggtcggcgacattggccgggagctcctcaa 289
            ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1351 atctagagaaggtcggcgacattggccggcagctcctcaa 1312

>gb|U17979.1|ZMU17979 Zea mays translation initiation factor eIF-4A mRNA, complete cds
          Length = 1441

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 250  atctagagaaggtcggcgacattggccgggagctcctcaa 289
            ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1312 atctagagaaggtcggcgacattggccggcagctcctcaa 1273

>ref|XM_464146.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1715

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 247  ataatctagagaaggtcggcgacattggccgggagctcctc 287
            ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1444 ataatctagagaaggtcagcgacgttggccggcagctcctc 1404

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                        
Query: 247     ataatctagagaaggtcggcgacattggccgggagctcctc 287
               ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 2560740 ataatctagagaaggtcagcgacgttggccggcagctcctc 2560700

>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 247   ataatctagagaaggtcggcgacattggccgggagctcctc 287
             ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 39523 ataatctagagaaggtcagcgacgttggccggcagctcctc 39483

>dbj|AK073620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E24, full
            insert sequence
          Length = 1714

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 247  ataatctagagaaggtcggcgacattggccgggagctcctc 287
            ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1443 ataatctagagaaggtcagcgacgttggccggcagctcctc 1403

>dbj|AB046415.1| Oryza sativa eIF4A-2 gene for eukaryotic initiation factor 4A,
            complete cds
          Length = 6767

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 247  ataatctagagaaggtcggcgacattggccgggagctcctc 287
            ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 5558 ataatctagagaaggtcagcgacgttggccggcagctcctc 5518

>dbj|AB046414.1| Oryza sativa eIF4A-2 mRNA for eukaryotic initiation factor 4A,
            complete cds
          Length = 1705

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 247  ataatctagagaaggtcggcgacattggccgggagctcctc 287
            ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1438 ataatctagagaaggtcagcgacgttggccggcagctcctc 1398

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 256      agaaggtcggcgacattggccgggagctcctcaat 290
                |||||||| ||||| |||||||| |||||||||||
Sbjct: 28988291 agaaggtcagcgacgttggccggcagctcctcaat 28988325

>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0596H10
          Length = 166570

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 3278 agaaggtcagcgacgttggccggcagctcctcaat 3312

>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468G03
          Length = 143918

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 256    agaaggtcggcgacattggccgggagctcctcaat 290
              |||||||| ||||| |||||||| |||||||||||
Sbjct: 138335 agaaggtcagcgacgttggccggcagctcctcaat 138369

>dbj|AK119234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H08, full
            insert sequence
          Length = 1754

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1378 agaaggtcagcgacgttggccggcagctcctcaat 1344

>dbj|AK105454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D03, full
            insert sequence
          Length = 1677

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1380 agaaggtcagcgacgttggccggcagctcctcaat 1346

>dbj|AK099927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O09, full
            insert sequence
          Length = 1672

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1374 agaaggtcagcgacgttggccggcagctcctcaat 1340

>dbj|AK065230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H10, full
            insert sequence
          Length = 1676

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1379 agaaggtcagcgacgttggccggcagctcctcaat 1345

>dbj|AK061696.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C12, full
            insert sequence
          Length = 1498

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1201 agaaggtcagcgacgttggccggcagctcctcaat 1167

>dbj|D12627.1|RICEIF4A Oryza sativa (japonica cultivar-group) mRNA for eukaryotic initiation
            factor 4A, complete cds
          Length = 1549

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 1249 agaaggtcagcgacgttggccggcagctcctcaat 1215

>dbj|AB046416.1| Oryza sativa eIF4A-1 gene for eukaryotic initiation factor 4A,
            complete cds
          Length = 6250

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 256  agaaggtcggcgacattggccgggagctcctcaat 290
            |||||||| ||||| |||||||| |||||||||||
Sbjct: 5870 agaaggtcagcgacgttggccggcagctcctcaat 5836

>gb|AC164399.4| Mus musculus chromosome 8, clone RP23-338K3, complete sequence
          Length = 213363

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 181    actgagagttgggagatattcaaca 205
              ||||||| |||||||||||||||||
Sbjct: 207354 actgagacttgggagatattcaaca 207378

>gb|AC099690.8| Mus musculus chromosome 8, clone RP23-73E9, complete sequence
          Length = 225655

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 181    actgagagttgggagatattcaaca 205
              ||||||| |||||||||||||||||
Sbjct: 107406 actgagacttgggagatattcaaca 107382

>gb|AC109510.7| Mus musculus chromosome 8, clone RP23-23D6, complete sequence
          Length = 185866

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 181    actgagagttgggagatattcaaca 205
              ||||||| |||||||||||||||||
Sbjct: 119258 actgagacttgggagatattcaaca 119282

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    tcaacaaaaacgaactttat 219
              ||||||||||||||||||||
Sbjct: 568207 tcaacaaaaacgaactttat 568188

>gb|AE006526.1| Streptococcus pyogenes M1 GAS, section 55 of 167 of the complete
            genome
          Length = 12393

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  tcaacaaaaacgaactttat 219
            ||||||||||||||||||||
Sbjct: 9134 tcaacaaaaacgaactttat 9115

>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    tcaacaaaaacgaactttat 219
              ||||||||||||||||||||
Sbjct: 599188 tcaacaaaaacgaactttat 599169

>gb|BC094099.1| Xenopus laevis cDNA clone IMAGE:6643466
          Length = 2100

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   aagtaaaatactccttagtg 47
            ||||||||||||||||||||
Sbjct: 1091 aagtaaaatactccttagtg 1072

>gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence (P1s DS08221 (D130) and DS00738
            (D271)), complete sequence
          Length = 111448

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gattcaaacagaaccagacc 167
            ||||||||||||||||||||
Sbjct: 5504 gattcaaacagaaccagacc 5485

>gb|CP000219.1| Drosophila melanogaster genomic scaffold 211000022280778
          Length = 150125

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gattcaaacagaaccagacc 167
              ||||||||||||||||||||
Sbjct: 138194 gattcaaacagaaccagacc 138175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,020,808
Number of Sequences: 3902068
Number of extensions: 2020808
Number of successful extensions: 29743
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29675
Number of HSP's gapped (non-prelim): 68
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)