ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR6B1_HUMAN (O95007) Olfactory receptor 6B1 (Olfactory receptor ... 30 7.9

>OR6B1_HUMAN (O95007) Olfactory receptor 6B1 (Olfactory receptor 7-3) (OR7-3)|
          Length = 311

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
 Frame = +1

Query: 193 MILMYDICNVDAVAK-VVSYIMILAHDTMHSGWP*FL----FVETWNAD---PETKFS-- 342
           M L++ +  +  VA+ V+  +++L +  +H     FL    F+ETW      P+  FS  
Sbjct: 27  MFLIFLVAYILTVAENVIIILLVLQNRPLHKPMYFFLANLSFLETWYISVTVPKLLFSFW 86

Query: 343 -----PPTTMMMLHLDYLLS*LIS*CMLYYTCMYDLYIYIYIDVHLIT 471
                   T+ M+ L + ++ + + C+L     YD Y+ I   +H  T
Sbjct: 87  SVNNSISFTLCMIQLYFFIALMCTECVLLAAMAYDRYVAICRPLHYPT 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,806,729
Number of Sequences: 219361
Number of extensions: 1493545
Number of successful extensions: 2757
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2757
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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