ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF509769.1| Hordeum vulgare subsp. vulgare isolate NRG027 Rpg... 50 0.009
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
3dbj|AK103521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.036
5emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 48 0.036
6emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 48 0.036
7dbj|AK166232.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 46 0.14
8gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer ... 46 0.14
9gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, com... 44 0.56
10ref|XM_588550.2| PREDICTED: Bos taurus hypothetical LOC511252 (L... 44 0.56
11gb|AC132428.3| Mus musculus BAC clone RP23-203K20 from chromosom... 44 0.56
12gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC... 44 0.56
13emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on ch... 42 2.2
14emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in... 42 2.2
15gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 42 2.2
16dbj|AK127934.1| Homo sapiens cDNA FLJ46043 fis, clone SPLEN2042051 42 2.2
17emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 i... 42 2.2
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
20dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
21emb|CT033816.7| Zebrafish DNA sequence from clone CH211-109N19 i... 42 2.2
22gb|AC004693.1|AC004693 Homo sapiens cosmid clone LUCA20 from 3p2... 42 2.2
23gb|AY360254.1| Oxypolis occidentalis internal transcribed spacer... 40 8.7
24ref|XM_761835.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 8.7
25ref|XM_761834.1| Giardia lamblia ATCC 50803 phosphotyrosyl phosp... 40 8.7
26gb|AC073327.4| Homo sapiens BAC clone RP11-358G16 from 7, comple... 40 8.7
27gb|AC142355.1| Pan troglodytes BAC clone RP43-22I16 from 7, comp... 40 8.7
28emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 40 8.7
29emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 40 8.7
30emb|CR792450.4| Zebrafish DNA sequence from clone RP71-15H2, com... 40 8.7
31emb|BX088555.3| Mouse DNA sequence from clone RP23-140K5 on chro... 40 8.7
32emb|BX927201.9| Zebrafish DNA sequence from clone DKEY-12D17 in ... 40 8.7
33gb|AC027336.4| Homo sapiens chromosome 5 clone CTD-2215L10, comp... 40 8.7
34gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, comple... 40 8.7
35emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in... 40 8.7
36gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosom... 40 8.7
37gb|AY168763.1| Branchiostoma belcheri tsingtaunese ribosomal pro... 40 8.7
38emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in... 40 8.7
39emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p1... 40 8.7
40gb|AE015927.1| Clostridium tetani E88, complete genome 40 8.7
41emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 i... 40 8.7
42emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 40 8.7
43gb|L41842.1|MQSVITE Aedes aegypti vitellogenin (VgA1) gene, comp... 40 8.7
44emb|AL731712.6| Mouse DNA sequence from clone RP23-100M24 on chr... 40 8.7 
>gb|AF509769.1| Hordeum vulgare subsp. vulgare isolate NRG027 Rpg1 region, genomic
           sequence
          Length = 3424

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 252 tatgatactagcccatgatactatgcatt 280
           |||||||||||| ||||||||||||||||
Sbjct: 418 tatgatactagcacatgatactatgcatt 390
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 583      agacggctaacaggaagtcctttcagcgttgggtgagaca 622
                ||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 27191047 agacggctaactgggagtccattcagtgttgggtgagaca 27191086
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>dbj|AK103521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131J04, full
            insert sequence
          Length = 3054

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 583  agacggctaacaggaagtcctttcagcgttgggtgagaca 622
            ||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 2644 agacggctaactgggagtccattcagtgttgggtgagaca 2605
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 583      agacggctaacaggaagtcctttcagcgttgggtgagaca 622
                ||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 27116647 agacggctaactgggagtccattcagtgttgggtgagaca 27116686
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 583    agacggctaacaggaagtcctttcagcgttgggtgagaca 622
              ||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 129946 agacggctaactgggagtccattcagtgttgggtgagaca 129985
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 583  agacggctaacaggaagtcctttcagcgttgggtgagaca 622
            ||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 4079 agacggctaactgggagtccattcagtgttgggtgagaca 4118
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>dbj|AK166232.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830022A06
           product:RNA polymerase II associated protein 1, full
           insert sequence
          Length = 4724

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 279 ttctgggtggccttagttcctgtttgt 305
           |||| ||||||||||||||||||||||
Sbjct: 998 ttcttggtggccttagttcctgtttgt 972
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>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164480

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 64    atagaaaccaaaattcttcatat 86
             |||||||||||||||||||||||
Sbjct: 70237 atagaaaccaaaattcttcatat 70215
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>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 184   agtgataatatgatactaatgtatga 209
             ||||||||||||||| ||||||||||
Sbjct: 18528 agtgataatatgatattaatgtatga 18553
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>ref|XM_588550.2| PREDICTED: Bos taurus hypothetical LOC511252 (LOC511252), mRNA
          Length = 4046

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 535  ctcttttctgtagtgcagatgacagt 560
            |||||||||| |||||||||||||||
Sbjct: 2217 ctcttttctgcagtgcagatgacagt 2242
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>gb|AC132428.3| Mus musculus BAC clone RP23-203K20 from chromosome 7, complete sequence
          Length = 194926

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 184   agtgataatatgatactaatgtatga 209
             ||||||||||||||| ||||||||||
Sbjct: 86261 agtgataatatgatattaatgtatga 86236
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>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete
            cds
          Length = 7813

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 247  tacattatgatactagcccatgatactatgcatt 280
            ||||||||||||||| |  |||||||||||||||
Sbjct: 2780 tacattatgatactaacatatgatactatgcatt 2747
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>emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on chromosome 13 Contains a
             novel gene and a CpG island, complete sequence
          Length = 153211

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 281   ctgggtggccttagttcctgtttgt 305
             |||||||||||||| ||||||||||
Sbjct: 46255 ctgggtggccttaggtcctgtttgt 46231
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>emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in linkage group 1,
            complete sequence
          Length = 185266

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 232  gctaaagtagtatcatacatt 252
            |||||||||||||||||||||
Sbjct: 6883 gctaaagtagtatcatacatt 6863
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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    catattatgatgatacaaaat 102
             |||||||||||||||||||||
Sbjct: 23091 catattatgatgatacaaaat 23071
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>dbj|AK127934.1| Homo sapiens cDNA FLJ46043 fis, clone SPLEN2042051
          Length = 2374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  catattatgatgatacaaaat 102
           |||||||||||||||||||||
Sbjct: 76  catattatgatgatacaaaat 56
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>emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 in linkage group 1,
            complete sequence
          Length = 197473

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 232  gctaaagtagtatcatacatt 252
            |||||||||||||||||||||
Sbjct: 7791 gctaaagtagtatcatacatt 7771
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 525      attgtccgacctcttttctgt 545
                |||||||||||||||||||||
Sbjct: 34453637 attgtccgacctcttttctgt 34453657
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 525    attgtccgacctcttttctgt 545
              |||||||||||||||||||||
Sbjct: 135981 attgtccgacctcttttctgt 136001
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 525   attgtccgacctcttttctgt 545
             |||||||||||||||||||||
Sbjct: 29356 attgtccgacctcttttctgt 29376
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>emb|CT033816.7| Zebrafish DNA sequence from clone CH211-109N19 in linkage group 1,
              complete sequence
          Length = 166556

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 232    gctaaagtagtatcatacatt 252
              |||||||||||||||||||||
Sbjct: 144598 gctaaagtagtatcatacatt 144578
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>gb|AC004693.1|AC004693 Homo sapiens cosmid clone LUCA20 from 3p21.3, complete sequence
          Length = 27700

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   catattatgatgatacaaaat 102
            |||||||||||||||||||||
Sbjct: 4359 catattatgatgatacaaaat 4339
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>gb|AY360254.1| Oxypolis occidentalis internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 599

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  tcaaactgaattgcacgcgc 50
           ||||||||||||||||||||
Sbjct: 154 tcaaactgaattgcacgcgc 173
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>ref|XM_761835.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_382_4763_4434)
           partial mRNA
          Length = 330

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  attatgatgatacaaaatat 104
           ||||||||||||||||||||
Sbjct: 270 attatgatgatacaaaatat 251
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>ref|XM_761834.1| Giardia lamblia ATCC 50803 phosphotyrosyl phosphatase activator
           protein (GLP_382_3771_4697) partial mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  attatgatgatacaaaatat 104
           ||||||||||||||||||||
Sbjct: 724 attatgatgatacaaaatat 743
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>gb|AC073327.4| Homo sapiens BAC clone RP11-358G16 from 7, complete sequence
          Length = 65497

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   atgtacatttaattacatga 474
             ||||||||||||||||||||
Sbjct: 26973 atgtacatttaattacatga 26992
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>gb|AC142355.1| Pan troglodytes BAC clone RP43-22I16 from 7, complete sequence
          Length = 192927

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    atgtacatttaattacatga 474
              ||||||||||||||||||||
Sbjct: 131717 atgtacatttaattacatga 131736
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>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    gtagtatcatacattatgat 257
              ||||||||||||||||||||
Sbjct: 129146 gtagtatcatacattatgat 129127
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>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    gtagtatcatacattatgat 257
              ||||||||||||||||||||
Sbjct: 100059 gtagtatcatacattatgat 100040
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>emb|CR792450.4| Zebrafish DNA sequence from clone RP71-15H2, complete sequence
          Length = 76622

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   tgtactatacttgtatgtat 429
             ||||||||||||||||||||
Sbjct: 55332 tgtactatacttgtatgtat 55313
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>emb|BX088555.3| Mouse DNA sequence from clone RP23-140K5 on chromosome 4, complete
             sequence
          Length = 46917

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   gatactaatgtatgatatat 214
             ||||||||||||||||||||
Sbjct: 13939 gatactaatgtatgatatat 13920
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>emb|BX927201.9| Zebrafish DNA sequence from clone DKEY-12D17 in linkage group 5,
             complete sequence
          Length = 101099

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   tgatgtacatttaattacat 472
             ||||||||||||||||||||
Sbjct: 53928 tgatgtacatttaattacat 53909
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>gb|AC027336.4| Homo sapiens chromosome 5 clone CTD-2215L10, complete sequence
          Length = 94479

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   tttcctaatgcatgctgtac 414
             ||||||||||||||||||||
Sbjct: 51651 tttcctaatgcatgctgtac 51670
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>gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, complete sequence
          Length = 188534

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 395  tttcctaatgcatgctgtac 414
            ||||||||||||||||||||
Sbjct: 6691 tttcctaatgcatgctgtac 6710
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>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3,
              complete sequence
          Length = 189210

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 12     ttaaatacagattgtgttntcaaactg 38
              ||||||||||| |||||| ||||||||
Sbjct: 182143 ttaaatacagaatgtgttttcaaactg 182169
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>gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosome 12, complete sequence
          Length = 144320

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aaattcttcatattatgatg 93
              ||||||||||||||||||||
Sbjct: 103398 aaattcttcatattatgatg 103379
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>gb|AY168763.1| Branchiostoma belcheri tsingtaunese ribosomal protein L32 mRNA,
           complete cds
          Length = 526

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 acaaccatgatgatgcttca 368
           ||||||||||||||||||||
Sbjct: 54  acaaccatgatgatgcttca 35
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>emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in linkage group 20,
              complete sequence
          Length = 176396

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    tgtactatacttgtatgtat 429
              ||||||||||||||||||||
Sbjct: 160677 tgtactatacttgtatgtat 160658
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>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE
          Length = 109575

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   attttcacccccaacaacca 355
             ||||||||||||||||||||
Sbjct: 75669 attttcacccccaacaacca 75688
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      aaaccaaaattcttcatatt 87
               ||||||||||||||||||||
Sbjct: 2431198 aaaccaaaattcttcatatt 2431217
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>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12,
             complete sequence
          Length = 140401

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 398   cctaatgcatgctgtactatactt 421
             ||||||||||||||| ||||||||
Sbjct: 14374 cctaatgcatgctgtgctatactt 14397
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>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete
              sequence
          Length = 262809

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 398    cctaatgcatgctgtactatactt 421
              ||||||||||||||| ||||||||
Sbjct: 215543 cctaatgcatgctgtgctatactt 215520
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>gb|L41842.1|MQSVITE Aedes aegypti vitellogenin (VgA1) gene, complete cds
          Length = 8780

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 326  cagaaacaaaattttcaccc 345
            ||||||||||||||||||||
Sbjct: 1164 cagaaacaaaattttcaccc 1183
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>emb|AL731712.6| Mouse DNA sequence from clone RP23-100M24 on chromosome 2, complete
              sequence
          Length = 215428

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 535    ctcttttctgtagtgcagatgacagtgatggatctc 570
              |||||| ||| | ||||||||||||||||| |||||
Sbjct: 193340 ctctttcctggaatgcagatgacagtgatgtatctc 193305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,388,681
Number of Sequences: 3902068
Number of extensions: 5388681
Number of successful extensions: 99468
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99304
Number of HSP's gapped (non-prelim): 164
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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