ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CRUST_PANBO (Q86GF7) Crustapain precursor (EC 3.4.22.-) (NsCys) 28 5.9
2CYB_CYACA (P48876) Cytochrome b 28 5.9

>CRUST_PANBO (Q86GF7) Crustapain precursor (EC 3.4.22.-) (NsCys)|
          Length = 323

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 81  LVFCMFSFGXRGCNXGRKTLKYQHVV 4
           LV C  S+G +GCN G     YQ+++
Sbjct: 158 LVDCSSSYGNQGCNGGWPYQAYQYII 183



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>CYB_CYACA (P48876) Cytochrome b|
          Length = 384

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 267 PALSVMNVPCSIFGPFFSLLLFWLTMPVVLL*KWI 163
           P ++ +NV  S+F P +  L FW+   +VL+  WI
Sbjct: 306 PWITNINVRSSLFRPLYKKL-FWILFSIVLILGWI 339


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,744,254
Number of Sequences: 219361
Number of extensions: 557350
Number of successful extensions: 1778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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