ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ201165.1| Hordeum vulgare subsp. vulgare cultivar CI6151 cr... 1037 0.0
2gb|DQ201164.1| Hordeum vulgare subsp. vulgare cultivar Morex cry... 1001 0.0
3gb|DQ201154.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 674 0.0
4gb|DQ201153.1| Hordeum vulgare subsp. vulgare cultivar Morex cry... 674 0.0
5gb|DQ201152.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo c... 674 0.0
6gb|AF545572.1| Sorghum bicolor cryptochrome 2 apoprotein (cry2) ... 194 2e-46
7ref|XM_472681.1| Oryza sativa (japonica cultivar-group), predic... 180 3e-42
8emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 180 3e-42
9dbj|AB098568.1| Oryza sativa (japonica cultivar-group) OsCRY2 mR... 180 3e-42
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
11dbj|AB073547.2| Oryza sativa (japonica cultivar-group) OsCRY1b m... 180 3e-42
12gb|AY835380.1| Sorghum bicolor cryptochrome 2 gene, complete cds 178 1e-41
13dbj|AK072182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
14ref|XM_466372.1| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
15dbj|AK064910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
17dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
18dbj|AB073546.1| Oryza sativa (japonica cultivar-group) OsCRY1a m... 70 8e-09
19gb|DQ201163.1| Hordeum vulgare subsp. vulgare cultivar CI6155 cr... 58 3e-05
20gb|DQ201162.1| Hordeum vulgare subsp. vulgare cultivar Morex cry... 58 3e-05
21gb|DQ201151.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 58 3e-05
22gb|DQ201150.1| Hordeum vulgare subsp. vulgare cultivar Morex cry... 58 3e-05
23gb|DQ201149.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo c... 58 3e-05
24dbj|AB024337.1| Oryza sativa (japonica cultivar-group) mRNA for ... 58 3e-05
25gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, comp... 42 1.8
26gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete... 42 1.8
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
28dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
29dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
30dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
31gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 7.1
32gb|AY688963.1| Carex sp. Rothrock 3011 alcohol dehydrogenase (Ad... 40 7.1
33gb|AY688960.1| Carex oxyandra 15896.2 alcohol dehydrogenase (Adh... 40 7.1
34gb|AY689021.1| Carex novae-angliae 1333.1 alcohol dehydrogenase ... 40 7.1
35gb|AY689020.1| Carex deflexa var. boottii cl.3 alcohol dehydroge... 40 7.1
36gb|AY689018.1| Carex albicans var. australis 1455.1 alcohol dehy... 40 7.1
37gb|AY689017.1| Carex albicans var. albicans 8150.2 alcohol dehyd... 40 7.1
38gb|AY689015.1| Carex albicans var. albicans 1200.1 alcohol dehyd... 40 7.1
39gb|AY689011.1| Carex rossii 6864.1 alcohol dehydrogenase (Adh1) ... 40 7.1
40gb|AY689009.1| Carex rossii cw.2 alcohol dehydrogenase (Adh1) ge... 40 7.1
41gb|AY689007.1| Carex peckii 89-178.1 alcohol dehydrogenase (Adh1... 40 7.1
42gb|AY689005.1| Carex umbellata 8963.2 alcohol dehydrogenase (Adh... 40 7.1
43gb|AY689004.1| Carex pensylvanica 8142.1 alcohol dehydrogenase (... 40 7.1
44gb|AY689003.1| Carex oxyandra 15896.3 alcohol dehydrogenase (Adh... 40 7.1
45gb|AY689002.1| Carex sp. Rothrock 3011 alcohol dehydrogenase (Ad... 40 7.1
46gb|AY689000.1| Carex deflexa var. deflexa 9701.1 alcohol dehydro... 40 7.1
47gb|AY688999.1| Carex geophila 1409.3 alcohol dehydrogenase (Adh1... 40 7.1
48gb|AY688996.1| Carex tonsa var. rugosperma 1332.1 alcohol dehydr... 40 7.1
49gb|AY688993.1| Carex communis var. communis 1344.3 alcohol dehyd... 40 7.1
50gb|AY688991.1| Carex floridana 1288.3 alcohol dehydrogenase (Adh... 40 7.1
51gb|AY688988.1| Carex communis var. communis 1334.1 alcohol dehyd... 40 7.1
52gb|AY688987.1| Carex tonsa var. rugosperma 1340.1 alcohol dehydr... 40 7.1
53gb|AY688986.1| Carex rossii 8107.1 alcohol dehydrogenase (Adh1) ... 40 7.1
54gb|AY688985.1| Carex umbellata 1308.1 alcohol dehydrogenase (Adh... 40 7.1
55gb|AY688984.1| Carex globosa 1347.2 alcohol dehydrogenase (Adh1)... 40 7.1
56gb|AY688983.1| Carex inops subsp. inops lac.2 alcohol dehydrogen... 40 7.1
57gb|AY688982.1| Carex serpenticola 7631.6 alcohol dehydrogenase (... 40 7.1
58gb|AY688979.1| Carex globosa 12316.12 alcohol dehydrogenase (Adh... 40 7.1
59gb|AY688969.1| Carex lucorum var. lucorum 1327.1 alcohol dehydro... 40 7.1
60gb|AY688968.1| Carex brevicaulis ss.5 alcohol dehydrogenase (Adh... 40 7.1
61gb|AC116460.10| Mus musculus chromosome 10, clone RP23-244G12, c... 40 7.1
62emb|AL592219.16| Human DNA sequence from clone RP11-5J2 on chrom... 40 7.1
63gb|AC008669.7| Homo sapiens chromosome 5 clone CTB-36H16, comple... 40 7.1
64gb|AC022116.5|AC022116 Homo sapiens chromosome 5 clone CTC-502J4... 40 7.1
65gb|AC153531.5| Mus musculus 10 BAC RP23-22C3 (Roswell Park Cance... 40 7.1
66emb|AL663062.7| Mouse DNA sequence from clone RP23-401I8 on chro... 40 7.1 
>gb|DQ201165.1| Hordeum vulgare subsp. vulgare cultivar CI6151 cryptochrome 1b mRNA,
            partial cds
          Length = 1736

 Score = 1037 bits (523), Expect = 0.0
 Identities = 523/523 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 1620

                                                                        
Query: 61   taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 1560

                                                                        
Query: 121  tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 1500

                                                                        
Query: 181  gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 1440

                                                                        
Query: 241  acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 1380

                                                                        
Query: 301  atttggctgcacggagttttccacgtccctgcctgttgtcagtgactgtgatagctgatg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 atttggctgcacggagttttccacgtccctgcctgttgtcagtgactgtgatagctgatg 1320

                                                                        
Query: 361  ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 1260

                                                                        
Query: 421  agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 1200

                                                       
Query: 481  gaccacgccaccatctctcccggtccagctacttgatgcttca 523
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 gaccacgccaccatctctcccggtccagctacttgatgcttca 1157
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>gb|DQ201164.1| Hordeum vulgare subsp. vulgare cultivar Morex cryptochrome 1b mRNA,
            partial cds
          Length = 1150

 Score = 1001 bits (505), Expect = 0.0
 Identities = 505/505 (100%)
 Strand = Plus / Minus

                                                                        
Query: 19   tttgcagctatatagacatataacacacccctacaaaaaatataagcatcccccactagg 78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 tttgcagctatatagacatataacacacccctacaaaaaatataagcatcccccactagg 1074

                                                                        
Query: 79   aaaccctcaattgtctgatgatcaataatacacatccttttttcgaccaactctagcaaa 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 aaaccctcaattgtctgatgatcaataatacacatccttttttcgaccaactctagcaaa 1014

                                                                        
Query: 139  gctatatataacgcatatatccttgcaggttctagaggattagatttacatagctattat 198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gctatatataacgcatatatccttgcaggttctagaggattagatttacatagctattat 954

                                                                        
Query: 199  cactcccacgaagacgcctgccttgcatgctcctccgactatacatcccagtttcgtgga 258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  cactcccacgaagacgcctgccttgcatgctcctccgactatacatcccagtttcgtgga 894

                                                                        
Query: 259  tctccgctctgcgtccggaaaacttgttttctaaccgatgtaatttggctgcacggagtt 318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  tctccgctctgcgtccggaaaacttgttttctaaccgatgtaatttggctgcacggagtt 834

                                                                        
Query: 319  ttccacgtccctgcctgttgtcagtgactgtgatagctgatgccagttcattatccggtg 378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  ttccacgtccctgcctgttgtcagtgactgtgatagctgatgccagttcattatccggtg 774

                                                                        
Query: 379  cgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctccata 438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  cgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctccata 714

                                                                        
Query: 439  agtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatctct 498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  agtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatctct 654

                                     
Query: 499  cccggtccagctacttgatgcttca 523
            |||||||||||||||||||||||||
Sbjct: 653  cccggtccagctacttgatgcttca 629
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>gb|DQ201154.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome
            1b (Cry1b) gene, complete cds
          Length = 4753

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 4599

                                                                        
Query: 61   taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 4539

                                                                        
Query: 121  tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 4479

                                                                        
Query: 181  gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 4419

                                                                        
Query: 241  acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 4359

                                                    
Query: 301  atttggctgcacggagttttccacgtccctgcctgttgtc 340
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 atttggctgcacggagttttccacgtccctgcctgttgtc 4319



 Score =  365 bits (184), Expect = 1e-97
 Identities = 184/184 (100%)
 Strand = Plus / Minus

                                                                        
Query: 340  cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 3325

                                                                        
Query: 400  ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 3265

                                                                        
Query: 460  tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 3205

                
Query: 520  ttca 523
            ||||
Sbjct: 3204 ttca 3201
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>gb|DQ201153.1| Hordeum vulgare subsp. vulgare cultivar Morex cryptochrome 1b (Cry1b)
            gene, complete cds
          Length = 4753

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 4599

                                                                        
Query: 61   taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 4539

                                                                        
Query: 121  tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 4479

                                                                        
Query: 181  gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 4419

                                                                        
Query: 241  acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 4359

                                                    
Query: 301  atttggctgcacggagttttccacgtccctgcctgttgtc 340
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 atttggctgcacggagttttccacgtccctgcctgttgtc 4319



 Score =  365 bits (184), Expect = 1e-97
 Identities = 184/184 (100%)
 Strand = Plus / Minus

                                                                        
Query: 340  cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 3325

                                                                        
Query: 400  ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 3265

                                                                        
Query: 460  tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 3205

                
Query: 520  ttca 523
            ||||
Sbjct: 3204 ttca 3201
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>gb|DQ201152.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo cryptochrome 1b
            (Cry1b) gene, complete cds
          Length = 4753

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 gccaatcacacaggggagtttgcagctatatagacatataacacacccctacaaaaaata 4599

                                                                        
Query: 61   taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 taagcatcccccactaggaaaccctcaattgtctgatgatcaataatacacatccttttt 4539

                                                                        
Query: 121  tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 tcgaccaactctagcaaagctatatataacgcatatatccttgcaggttctagaggatta 4479

                                                                        
Query: 181  gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 gatttacatagctattatcactcccacgaagacgcctgccttgcatgctcctccgactat 4419

                                                                        
Query: 241  acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 acatcccagtttcgtggatctccgctctgcgtccggaaaacttgttttctaaccgatgta 4359

                                                    
Query: 301  atttggctgcacggagttttccacgtccctgcctgttgtc 340
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 atttggctgcacggagttttccacgtccctgcctgttgtc 4319



 Score =  365 bits (184), Expect = 1e-97
 Identities = 184/184 (100%)
 Strand = Plus / Minus

                                                                        
Query: 340  cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 cagtgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaa 3325

                                                                        
Query: 400  ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 ataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgc 3265

                                                                        
Query: 460  tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 tgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttgatgc 3205

                
Query: 520  ttca 523
            ||||
Sbjct: 3204 ttca 3201
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>gb|AF545572.1| Sorghum bicolor cryptochrome 2 apoprotein (cry2) mRNA, complete cds
          Length = 2206

 Score =  194 bits (98), Expect = 2e-46
 Identities = 155/174 (89%)
 Strand = Plus / Minus

                                                                        
Query: 343  tgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaaata 402
            |||||||||||  |||  ||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 2108 tgactgtgataattgactccagttcatcaaccggtgcgactgtggatgcctatccaaata 2049

                                                                        
Query: 403  actcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgctgc 462
            ||||||||||||||| ||||||||||| ||  || ||||||| |||||||||||||||||
Sbjct: 2048 actcctactagaaacgtcagcttcatcagcagcaaaagtttctgaatggcctgatgctgc 1989

                                                                  
Query: 463  aggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttga 516
            |||||| |||||||||||||||||  | || ||||| |||||||||||||||||
Sbjct: 1988 aggaggtgaccaaactgggaccacagcgccctctctgccggtccagctacttga 1935



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 302  tttggctgcacggagttttccacgtccctgcctgttgtc 340
            ||||||||||| || |||||||| |||| ||||||||||
Sbjct: 2166 tttggctgcacagaattttccacttcccagcctgttgtc 2128
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>ref|XM_472681.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2082

 Score =  180 bits (91), Expect = 3e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                        
Query: 361  ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
            ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 2058 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 1999

                                                                        
Query: 421  agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
            ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1998 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 1939

                                                   
Query: 481  gaccacgccaccatctctcccggtccagctacttgatgc 519
            ||| ||||| || |||||||| ||||||| |||||||||
Sbjct: 1938 gactacgcctccctctctcccagtccagccacttgatgc 1900
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>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
              complete sequence
          Length = 175698

 Score =  180 bits (91), Expect = 3e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                          
Query: 361    ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
              ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 132213 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 132154

                                                                          
Query: 421    agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
              ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 132153 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 132094

                                                     
Query: 481    gaccacgccaccatctctcccggtccagctacttgatgc 519
              ||| ||||| || |||||||| ||||||| |||||||||
Sbjct: 132093 gactacgcctccctctctcccagtccagccacttgatgc 132055



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                          
Query: 165    aggttctagaggattagatttacatagctattatcactcccacgaagacgcctgccttgc 224
              |||||||| ||||||||||||||| | ||||| |||| | || |||   ||||| |||||
Sbjct: 133269 aggttctacaggattagatttacacaactattgtcacactcaggaaattgcctggcttgc 133210

                               
Query: 225    atgctcctccgactata 241
              |||||| || |||||||
Sbjct: 133209 atgctcatcagactata 133193
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>dbj|AB098568.1| Oryza sativa (japonica cultivar-group) OsCRY2 mRNA for cryptochrome,
            complete cds
          Length = 1707

 Score =  180 bits (91), Expect = 3e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                        
Query: 361  ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
            ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 1683 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 1624

                                                                        
Query: 421  agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
            ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1623 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 1564

                                                   
Query: 481  gaccacgccaccatctctcccggtccagctacttgatgc 519
            ||| ||||| || |||||||| ||||||| |||||||||
Sbjct: 1563 gactacgcctccctctctcccagtccagccacttgatgc 1525
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  180 bits (91), Expect = 3e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                            
Query: 361      ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
                ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 22528458 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 22528399

                                                                            
Query: 421      agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
                ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 22528398 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 22528339

                                                       
Query: 481      gaccacgccaccatctctcccggtccagctacttgatgc 519
                ||| ||||| || |||||||| ||||||| |||||||||
Sbjct: 22528338 gactacgcctccctctctcccagtccagccacttgatgc 22528300



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                            
Query: 165      aggttctagaggattagatttacatagctattatcactcccacgaagacgcctgccttgc 224
                |||||||| ||||||||||||||| | ||||| |||| | || |||   ||||| |||||
Sbjct: 22529514 aggttctacaggattagatttacacaactattgtcacactcaggaaattgcctggcttgc 22529455

                                 
Query: 225      atgctcctccgactata 241
                |||||| || |||||||
Sbjct: 22529454 atgctcatcagactata 22529438
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>dbj|AB073547.2| Oryza sativa (japonica cultivar-group) OsCRY1b mRNA for cryptochrome
            1b, complete cds
          Length = 2904

 Score =  180 bits (91), Expect = 3e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                        
Query: 361  ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
            ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 2480 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 2421

                                                                        
Query: 421  agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
            ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2420 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 2361

                                                   
Query: 481  gaccacgccaccatctctcccggtccagctacttgatgc 519
            ||| ||||| || |||||||| ||||||| |||||||||
Sbjct: 2360 gactacgcctccctctctcccagtccagccacttgatgc 2322



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 165  aggttctagaggattagatttacatagctattatcactcccacgaagacgcctgccttgc 224
            |||||||| ||||||||||||||| | ||||| |||| | || |||   ||||| |||||
Sbjct: 2714 aggttctacaggattagatttacacaactattgtcacactcaggaaattgcctggcttgc 2655

                             
Query: 225  atgctcctccgactata 241
            |||||| || |||||||
Sbjct: 2654 atgctcatcagactata 2638
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>gb|AY835380.1| Sorghum bicolor cryptochrome 2 gene, complete cds
          Length = 3417

 Score =  178 bits (90), Expect = 1e-41
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                        
Query: 343  tgactgtgatagctgatgccagttcattatccggtgcgactgaggatgcctatccaaata 402
            |||||||||||  |||  ||||||||| | ||||| |||| | |||||||||||||||||
Sbjct: 3091 tgactgtgataattgactccagttcatcaaccggtacgaccgtggatgcctatccaaata 3032

                                                                        
Query: 403  actcctactagaaacatcagcttcatcggctccataagtttcagaatggcctgatgctgc 462
            ||||||||||||||| ||||||||||| ||  || ||||||| |||||||||||||||||
Sbjct: 3031 actcctactagaaacgtcagcttcatcagcagcaaaagtttctgaatggcctgatgctgc 2972

                                                                  
Query: 463  aggaggcgaccaaactgggaccacgccaccatctctcccggtccagctacttga 516
            |||||| |||||||||||||||||  | || ||||| |||||||||||||||||
Sbjct: 2971 aggaggtgaccaaactgggaccacagcgccctctctgccggtccagctacttga 2918



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 302  tttggctgcacggagttttccacgtccctgcctgttgtc 340
            ||||||||||| || |||||||| |||| ||||||||||
Sbjct: 3410 tttggctgcacagaattttccacttcccagcctgttgtc 3372
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>dbj|AK072182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D14, full
            insert sequence
          Length = 4629

 Score =  167 bits (84), Expect = 5e-38
 Identities = 142/160 (88%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                        
Query: 361  ccagttcattatccggtgcgactgaggatgcctatccaaataactcctactagaaacatc 420
            ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 3398 ccagttcatcaaccggtgcgactgtggatgcctatccaaataactcctactagaaatgtc 3339

                                                                        
Query: 421  agcttcatcggctccataagtttcagaatggcctgatgctgcaggaggcgaccaaactgg 480
            ||||||||| |   || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 3338 agcttcatcagaggcaaaagtttctgaatggtctgatgctgcaggaggcgaccaaactgg 3279

                                                    
Query: 481  gaccacgccaccatctctccc-ggtccagctacttgatgc 519
            ||| ||||| || |||||||| | |||||| |||||||||
Sbjct: 3278 gactacgcctccctctctcccagctccagccacttgatgc 3239



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 165  aggttctagaggattagatttacatagctattatcactcccacgaagacgcctgccttgc 224
            |||||||| ||||||||||||||| | ||||| |||| | || |||   ||||| |||||
Sbjct: 4454 aggttctacaggattagatttacacaactattgtcacactcaggaaattgcctggcttgc 4395

                             
Query: 225  atgctcctccgactata 241
            |||||| || |||||||
Sbjct: 4394 atgctcatcagactata 4378
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>ref|XM_466372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2832

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 164/203 (80%)
 Strand = Plus / Minus

                                                                        
Query: 317  ttttccacgtccctgcctgttgtcagtgactgtgatagctgatgccagttcattatccgg 376
            |||||||| |||| ||||||||||| |||||| || ||||||  ||||||||| | |   
Sbjct: 2541 ttttccacttcccagcctgttgtcaatgactgcgagagctgactccagttcatcaacgta 2482

                                                                        
Query: 377  tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
            |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 2481 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 2422

                                                                        
Query: 437  taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
            ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 2421 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 2362

                                   
Query: 497  ctcccggtccagctacttgatgc 519
            ||||| |||||| | ||||||||
Sbjct: 2361 ctcccagtccagttgcttgatgc 2339
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>dbj|AK064910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M07, full
            insert sequence
          Length = 2833

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 164/203 (80%)
 Strand = Plus / Minus

                                                                        
Query: 317  ttttccacgtccctgcctgttgtcagtgactgtgatagctgatgccagttcattatccgg 376
            |||||||| |||| ||||||||||| |||||| || ||||||  ||||||||| | |   
Sbjct: 2542 ttttccacttcccagcctgttgtcaatgactgcgagagctgactccagttcatcaacgta 2483

                                                                        
Query: 377  tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
            |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 2482 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 2423

                                                                        
Query: 437  taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
            ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 2422 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 2363

                                   
Query: 497  ctcccggtccagctacttgatgc 519
            ||||| |||||| | ||||||||
Sbjct: 2362 ctcccagtccagttgcttgatgc 2340
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                            
Query: 377      tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
                |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 21999122 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 21999063

                                                                            
Query: 437      taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
                ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 21999062 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 21999003

                                       
Query: 497      ctcccggtccagctacttgatgc 519
                ||||| |||||| | ||||||||
Sbjct: 21999002 ctcccagtccagttgcttgatgc 21998980
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>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046L23
          Length = 100041

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                         
Query: 377   tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
             |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 47744 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 47685

                                                                         
Query: 437   taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
             ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 47684 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 47625

                                    
Query: 497   ctcccggtccagctacttgatgc 519
             ||||| |||||| | ||||||||
Sbjct: 47624 ctcccagtccagttgcttgatgc 47602
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>dbj|AB073546.1| Oryza sativa (japonica cultivar-group) OsCRY1a mRNA for cryptochrome
            1a, complete cds
          Length = 2587

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                        
Query: 377  tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
            |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 2156 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 2097

                                                                        
Query: 437  taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
            ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 2096 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 2037

                                   
Query: 497  ctcccggtccagctacttgatgc 519
            ||||| |||||| | ||||||||
Sbjct: 2036 ctcccagtccagttgcttgatgc 2014
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>gb|DQ201163.1| Hordeum vulgare subsp. vulgare cultivar CI6155 cryptochrome 1a
           mRNA, partial cds
          Length = 1400

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 395 tccaaataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcct 454
           |||| |||||||||||| ||||  |||| |||||| ||  ||||||  || |||||||| 
Sbjct: 855 tccagataactcctactggaaatgtcagtttcatccgcagcataaggatctgaatggccc 796

                                                                       
Query: 455 gatgctgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctactt 514
           || || || ||||| ||||| || || || || ||||| |||||||| |||||||| |||
Sbjct: 795 gacgcagccggaggtgaccagacgggtactaccccaccttctctcccagtccagctgctt 736

                
Query: 515 gatgc 519
           |||||
Sbjct: 735 gatgc 731
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>gb|DQ201162.1| Hordeum vulgare subsp. vulgare cultivar Morex cryptochrome 1a mRNA,
           partial cds
          Length = 1415

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 395 tccaaataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcct 454
           |||| |||||||||||| ||||  |||| |||||| ||  ||||||  || |||||||| 
Sbjct: 846 tccagataactcctactggaaatgtcagtttcatccgcagcataaggatctgaatggccc 787

                                                                       
Query: 455 gatgctgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctactt 514
           || || || ||||| ||||| || || || || ||||| |||||||| |||||||| |||
Sbjct: 786 gacgcagccggaggtgaccagacgggtactaccccaccttctctcccagtccagctgctt 727

                
Query: 515 gatgc 519
           |||||
Sbjct: 726 gatgc 722
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>gb|DQ201151.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome
            1a (Cry1a) gene, complete cds
          Length = 3808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 395  tccaaataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcct 454
            |||| |||||||||||| ||||  |||| |||||| ||  ||||||  || |||||||| 
Sbjct: 3208 tccagataactcctactggaaatgtcagtttcatccgcagcataaggatctgaatggccc 3149

                                                                        
Query: 455  gatgctgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctactt 514
            || || || ||||| ||||| || || || || ||||| |||||||| |||||||| |||
Sbjct: 3148 gacgcagccggaggtgaccagacgggtactaccccaccttctctcccagtccagctgctt 3089

                 
Query: 515  gatgc 519
            |||||
Sbjct: 3088 gatgc 3084
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>gb|DQ201150.1| Hordeum vulgare subsp. vulgare cultivar Morex cryptochrome 1a (Cry1a)
            gene, complete cds
          Length = 3808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 395  tccaaataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcct 454
            |||| |||||||||||| ||||  |||| |||||| ||  ||||||  || |||||||| 
Sbjct: 3208 tccagataactcctactggaaatgtcagtttcatccgcagcataaggatctgaatggccc 3149

                                                                        
Query: 455  gatgctgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctactt 514
            || || || ||||| ||||| || || || || ||||| |||||||| |||||||| |||
Sbjct: 3148 gacgcagccggaggtgaccagacgggtactaccccaccttctctcccagtccagctgctt 3089

                 
Query: 515  gatgc 519
            |||||
Sbjct: 3088 gatgc 3084
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>gb|DQ201149.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo cryptochrome 1a
            (Cry1a) gene, complete cds
          Length = 3808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 395  tccaaataactcctactagaaacatcagcttcatcggctccataagtttcagaatggcct 454
            |||| |||||||||||| ||||  |||| |||||| ||  ||||||  || |||||||| 
Sbjct: 3208 tccagataactcctactggaaatgtcagtttcatccgcagcataaggatctgaatggccc 3149

                                                                        
Query: 455  gatgctgcaggaggcgaccaaactgggaccacgccaccatctctcccggtccagctactt 514
            || || || ||||| ||||| || || || || ||||| |||||||| |||||||| |||
Sbjct: 3148 gacgcagccggaggtgaccagacgggtactaccccaccttctctcccagtccagctgctt 3089

                 
Query: 515  gatgc 519
            |||||
Sbjct: 3088 gatgc 3084
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>dbj|AB024337.1| Oryza sativa (japonica cultivar-group) mRNA for blue-light
            photoreceptor, complete cds
          Length = 2797

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 377  tgcgactgaggatgcctatccaaataactcctactagaaacatcagcttcatcggctcca 436
            |||||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||||  | 
Sbjct: 2430 tgcgactgtggatgcctgtccaaataacttctactggtaatgtcagcttcatcggcagcg 2371

                                                                        
Query: 437  taagtttcagaatggcctgatgctgcaggaggcgaccaaactgggaccacgccaccatct 496
            ||    || ||  ||||||| ||||| ||||||||||| || || |||||||| || |||
Sbjct: 2370 tagtgatctgaggggcctgacgctgccggaggcgaccagacgggcaccacgccgccttct 2311

                 
Query: 497  ctccc 501
            |||||
Sbjct: 2310 ctccc 2306
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>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence
          Length = 253738

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    ttctaaccgatgtaatttggc 307
              |||||||||||||||||||||
Sbjct: 129319 ttctaaccgatgtaatttggc 129339
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>gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete sequence
          Length = 214857

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    ttctaaccgatgtaatttggc 307
              |||||||||||||||||||||
Sbjct: 165957 ttctaaccgatgtaatttggc 165977
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 353      agctgatgccagttcattatc 373
                |||||||||||||||||||||
Sbjct: 28431519 agctgatgccagttcattatc 28431499
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    agctgatgccagttcattatc 373
              |||||||||||||||||||||
Sbjct: 157082 agctgatgccagttcattatc 157062
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>dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024E09, full
           insert sequence
          Length = 696

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 353 agctgatgccagttcattatc 373
           |||||||||||||||||||||
Sbjct: 592 agctgatgccagttcattatc 572
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>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0304A10
          Length = 21211

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   agctgatgccagttcattatc 373
             |||||||||||||||||||||
Sbjct: 13306 agctgatgccagttcattatc 13286
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 324     cgtccctgcctgttgtcagtgact 347
               |||||||||||||||| |||||||
Sbjct: 2058733 cgtccctgcctgttgtgagtgact 2058756
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>gb|AY688963.1| Carex sp. Rothrock 3011 alcohol dehydrogenase (Adh3) gene, exons 4
           through 8 and partial cds
          Length = 910

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 747 aatttggctgcacggagttt 766
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>gb|AY688960.1| Carex oxyandra 15896.2 alcohol dehydrogenase (Adh3) gene, exons 4
           through 8 and partial cds
          Length = 913

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 747 aatttggctgcacggagttt 766
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>gb|AY689021.1| Carex novae-angliae 1333.1 alcohol dehydrogenase (Adh1) gene, exons
           4 through 8 and partial cds
          Length = 864

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689020.1| Carex deflexa var. boottii cl.3 alcohol dehydrogenase (Adh1) gene,
           exons 4 through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689018.1| Carex albicans var. australis 1455.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689017.1| Carex albicans var. albicans 8150.2 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689015.1| Carex albicans var. albicans 1200.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689011.1| Carex rossii 6864.1 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689009.1| Carex rossii cw.2 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689007.1| Carex peckii 89-178.1 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 700 aatttggctgcacggagttt 719
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>gb|AY689005.1| Carex umbellata 8963.2 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689004.1| Carex pensylvanica 8142.1 alcohol dehydrogenase (Adh1) gene, exons
           4 through 8 and partial cds
          Length = 868

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689003.1| Carex oxyandra 15896.3 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 870

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 705 aatttggctgcacggagttt 724
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>gb|AY689002.1| Carex sp. Rothrock 3011 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 864

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY689000.1| Carex deflexa var. deflexa 9701.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 864

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 700 aatttggctgcacggagttt 719
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>gb|AY688999.1| Carex geophila 1409.3 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 871

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 707 aatttggctgcacggagttt 726
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>gb|AY688996.1| Carex tonsa var. rugosperma 1332.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 905

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 740 aatttggctgcacggagttt 759
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>gb|AY688993.1| Carex communis var. communis 1344.3 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 704 aatttggctgcacggagttt 723
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>gb|AY688991.1| Carex floridana 1288.3 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688988.1| Carex communis var. communis 1334.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 704 aatttggctgcacggagttt 723
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>gb|AY688987.1| Carex tonsa var. rugosperma 1340.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 864

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 700 aatttggctgcacggagttt 719
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>gb|AY688986.1| Carex rossii 8107.1 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 700 aatttggctgcacggagttt 719
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>gb|AY688985.1| Carex umbellata 1308.1 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688984.1| Carex globosa 1347.2 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688983.1| Carex inops subsp. inops lac.2 alcohol dehydrogenase (Adh1) gene,
           exons 4 through 8 and partial cds
          Length = 868

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 702 aatttggctgcacggagttt 721
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>gb|AY688982.1| Carex serpenticola 7631.6 alcohol dehydrogenase (Adh1) gene, exons
           4 through 8 and partial cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688979.1| Carex globosa 12316.12 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688969.1| Carex lucorum var. lucorum 1327.1 alcohol dehydrogenase (Adh1)
           gene, exons 4 through 8 and partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AY688968.1| Carex brevicaulis ss.5 alcohol dehydrogenase (Adh1) gene, exons 4
           through 8 and partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 aatttggctgcacggagttt 319
           ||||||||||||||||||||
Sbjct: 701 aatttggctgcacggagttt 720
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>gb|AC116460.10| Mus musculus chromosome 10, clone RP23-244G12, complete sequence
          Length = 203330

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    attgtctgatgatcaataat 107
             ||||||||||||||||||||
Sbjct: 66872 attgtctgatgatcaataat 66853
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>emb|AL592219.16| Human DNA sequence from clone RP11-5J2 on chromosome 9 Contains the
            5' end of the PTGES gene for prostaglandin E synthase
            (PGES, PIG12, MGST-IV, MGST1L1, TP53I12, MGST1-L1) and a
            ubiquitin activating enzyme 2 pseudogene, complete
            sequence
          Length = 61606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  ggcctgatgctgcaggaggc 469
            ||||||||||||||||||||
Sbjct: 4149 ggcctgatgctgcaggaggc 4130
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>gb|AC008669.7| Homo sapiens chromosome 5 clone CTB-36H16, complete sequence
          Length = 189156

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     aaaccctcaattgtctgatg 98
              ||||||||||||||||||||
Sbjct: 151216 aaaccctcaattgtctgatg 151197
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>gb|AC022116.5|AC022116 Homo sapiens chromosome 5 clone CTC-502J4, complete sequence
          Length = 171829

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aaaccctcaattgtctgatg 98
             ||||||||||||||||||||
Sbjct: 83088 aaaccctcaattgtctgatg 83069
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>gb|AC153531.5| Mus musculus 10 BAC RP23-22C3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186219

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     attgtctgatgatcaataat 107
              ||||||||||||||||||||
Sbjct: 145187 attgtctgatgatcaataat 145168
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>emb|AL663062.7| Mouse DNA sequence from clone RP23-401I8 on chromosome 2, complete
             sequence
          Length = 191638

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   cctgttgtcagtgactgtga 351
             ||||||||||||||||||||
Sbjct: 19498 cctgttgtcagtgactgtga 19517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,491,072
Number of Sequences: 3902068
Number of extensions: 4491072
Number of successful extensions: 72083
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71896
Number of HSP's gapped (non-prelim): 175
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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