>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 1995

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = -1

Query: 473  RLREVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLVRVHC 294
            RL+EVV +++EE    D+ R ++E    R++++  +++  ++ A+R  A      ++   
Sbjct: 1867 RLKEVVLQVEEERRVADQLRDQLEKGNLRVKQLKRQLEEAEEEASR--AQAGRRRLQREL 1924

Query: 293  KEVREEKLKALKVANTKKLRFEDFMETF----LESATRIADGIDLDTFVESSSPGANP 132
            ++V E      +   T + R      TF    +    R+ +G+  D   E + PG+ P
Sbjct: 1925 EDVTESAESMNREVTTLRNRLRRGPLTFTTRTVRQVFRLEEGVASDEEAEEAQPGSGP 1982

>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 2000

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
 Frame = -1

Query: 473  RLREVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLVRVHC 294
            RL+EVV ++DEE    D+ R ++E    RL+++  +++  ++ A+R  A      ++   
Sbjct: 1871 RLKEVVLQVDEERRVADQVRDQLEKSNLRLKQLKRQLEEAEEEASR--AQAGRRRLQREL 1928

Query: 293  KEVREEKLKALKVANTKKLRFEDFMETF----LESATRIADGIDLDTFVESSSPGANPDD 126
            ++V E      +   T + R      TF    +    R+ +G+  D   E  + GA P  
Sbjct: 1929 EDVTESAESMNREVTTLRNRLRRGPLTFTTRTVRQVFRLEEGVASD---EEEAEGAEPGS 1985

Query: 125  A 123
            A
Sbjct: 1986 A 1986

>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)|
            (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte
            nuclear envelope protein 1) (Myne-1) (Enaptin)
          Length = 8797

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 24/169 (14%)
 Frame = -1

Query: 479  IGRLREVVGRIDEELWPED---ESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSL 309
            + ++ E +  +D  L  E+   E   E++N   RLEE+ ++V   K+          L  
Sbjct: 2217 VPQMAENISNLDNHLRAEELLKEFESEVKNKALRLEELHSKVNDLKELTKNLETPPDLQF 2276

Query: 308  VRV-------HCKEVREEKLKALKVANTKKLRFEDFMETFLESATRIADGID-------- 174
            +         H KE+ E     LK    +  + E F+       T++ + +         
Sbjct: 2277 IEADLMQKLEHAKEITEVAKGTLKDFTAQSTQVEKFINDITTWFTKVEESLMNCAQNETC 2336

Query: 173  ------LDTFVESSSPGANPDDA*ENLSSVCRVLICKELWPLLLAVTFL 45
                   D   E  S  +N     ENL+S+CR     EL  L  A+T L
Sbjct: 2337 EALKKVKDIQKELQSQQSNISSTQENLNSLCRKYHSAELESLGRAMTGL 2385

>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog|
           (cTAGE-5 protein) (Meningioma-expressed antigen 6)
          Length = 779

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = -1

Query: 473 RLREVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLVRVHC 294
           +L + +  ++E+L  E     E + LM    +I  R+QS +  +    + VA +      
Sbjct: 118 KLEDEILLLEEKLEEERAKHSEQDELMA---DISKRIQSLEDESKSLKSQVAEAKTTFRI 174

Query: 293 KEVREEKLK-ALKVANTKKLRFEDFMETFLESATRIADGI-DLD 168
            E+ EE+LK A+K A  +  + ++  +  L+    + + + DLD
Sbjct: 175 FEINEERLKGAIKDALNENSQLQESQKQLLQETEMMKEQVNDLD 218

>TRME_SYNY3 (P73839) Probable tRNA modification GTPase trmE|
          Length = 456

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = -1

Query: 470 LREVVGRID--EELWP--EDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVAL 315
           L EV  RID  ++L P  ED  RQ+++NL  +LE+I N  Q  +    R G  VA+
Sbjct: 173 LAEVEARIDFEDDLPPLDEDSIRQQLQNLYQQLEDILNTAQ--RGELLRTGLKVAI 226

>PURA_BACSU (P29726) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 430

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -1

Query: 290 EVREEKLKALKVANTKKLRFEDFMETFLESATRIADGIDLDTFVE 156
           EV EE+  A K+  TKK     +M+       RIAD +D D F E
Sbjct: 114 EVEEERKGANKIGTTKKGIGPAYMDKAARIGIRIADLLDRDAFAE 158

>SYI_METCA (Q605M7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 939

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
 Frame = +2

Query: 83  YKSTLGIP------RINFLTRHPD*RQDWRTLRMYPDRSRRRCG 196
           YKSTL +P      + N   R P+  + WRTL +Y     RR G
Sbjct: 3   YKSTLNLPQTPFPMKANLAQREPEQIERWRTLDLYRKVRSRRAG 46

>MOCC_RHIME (P49304) Rhizopine catabolism protein mocC|
          Length = 325

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
 Frame = -1

Query: 422 ESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALS------LVRVHCKEVREEKLKAL 261
           E+ +E++ LM+   E    +     SA   G  VAL       +V VHCK+VR + L+A 
Sbjct: 174 ETDEEVDRLMSVTGERVGLLFDSGHSAFSGGDPVALCVRHAKRIVHVHCKDVRGDVLRAA 233

Query: 260 KVANTKKLRFEDFMETFLESATRIA--DGIDLDTFVES 153
           +  +        FM+  LE    +    G+D  + +E+
Sbjct: 234 REGDL------SFMDAVLEGIFTVPGDGGVDFPSILEN 265

>SMC1_YEAST (P32908) Structural maintenance of chromosome 1 (DA-box protein SMC1)|
          Length = 1225

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = -1

Query: 425  DESRQEMENLMTRLEEIPNRVQSWKKSAARCG-ADVALSLVRVHCKEVREEKLKAL-KVA 252
            D +R+E+E  +  +EEI N +Q   ++  R   A+    ++    ++++ E+ K L +  
Sbjct: 995  DSARKELEQKIHEVEEILNELQPNARALERYDEAEGRFEVINNETEQLKAEEKKILNQFL 1054

Query: 251  NTKKLRFEDFMETFLESATRIADGIDLDTFVESSSPGANPDDA*ENLS 108
              KK R E F +TF      ++D +D      + +P +N + A  N S
Sbjct: 1055 KIKKKRKELFEKTF----DYVSDHLDAIYRELTKNPNSNVELAGGNAS 1098

>PGKT_THEMA (P36204) Bifunctional PGK/TIM [Includes: Phosphoglycerate kinase|
           (EC 2.7.2.3); Triosephosphate isomerase (EC 5.3.1.1)
           (TIM) (Triose-phosphate isomerase)]
          Length = 654

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 52  VTANSSGQSSLQINTRHTEDKFSYASSGLAPGLEDSTNVSRSIPSAMRVALSRKVSMK 225
           +T    G S+  +N    EDKFS+ S+G    LE      + +P    +A  +K++ K
Sbjct: 348 ITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLE--GKELPGIASIADKKKITRK 403

>DESP_HUMAN (P15924) Desmoplakin (DP) (250/210 kDa paraneoplastic pemphigus|
           antigen)
          Length = 2871

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -1

Query: 314 SLVRVHCKEVREEKLKALKVANTKKLRFEDFMETFLE 204
           SLV  H   +  EK++A+ +A  K +R ED+M+T  +
Sbjct: 546 SLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIAD 582

>UL34_VZVD (P09280) Virion gene 24 protein|
          Length = 269

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 250 TRRNFDSKTSWKPSLRVPP--ASPTGSIWIHS*SPPVLALIRMTR 122
           T  N D    W+PS R PP   SP  S+ + S   P L   + TR
Sbjct: 193 TGNNLDEYIRWRPSFRSPPENGSPNTSVQMQSDIKPALPDTQTTR 237

>KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR047W (EC|
           2.7.11.1)
          Length = 893

 Score = 25.8 bits (55), Expect(2) = 5.4
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 43  SKNVTANSSGQSSLQINTRHTEDKFSYAS--SGLAPGLEDSTNVSRSIP 183
           SKN +A++S QSSL+ ++  +  K  Y    + +A     S  +S +IP
Sbjct: 100 SKNASAHNSSQSSLEGDSASSSSKLRYVKPMTSVANASPASPPLSPTIP 148



 Score = 22.3 bits (46), Expect(2) = 5.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 236 EVSSCWRPSMLSASPRAPPCNELGPG 313
           E S+C  P MLS+S  +P     G G
Sbjct: 169 EHSNCGSPIMLSSSSFSPTVARTGTG 194

>RF1_CAMJR (Q5HSH9) Peptide chain release factor 1 (RF-1)|
          Length = 355

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +1

Query: 34  PHRSKNVTANSSGQSSLQINTRHTEDKFSYASSGLAPGLEDSTNVSRSIPSAMRVALSRK 213
           P+  K     SSG     +NT  +  + ++  +G+    +D  +  ++  SAM+V  +R 
Sbjct: 215 PNDLKVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARL 274

Query: 214 VSMKSSNR 237
             M+ S R
Sbjct: 275 YEMQESER 282

>RF1_CAMJE (Q9PM63) Peptide chain release factor 1 (RF-1)|
          Length = 355

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +1

Query: 34  PHRSKNVTANSSGQSSLQINTRHTEDKFSYASSGLAPGLEDSTNVSRSIPSAMRVALSRK 213
           P+  K     SSG     +NT  +  + ++  +G+    +D  +  ++  SAM+V  +R 
Sbjct: 215 PNDLKVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARL 274

Query: 214 VSMKSSNR 237
             M+ S R
Sbjct: 275 YEMQESER 282

>NOG1_ENCCU (Q8SVJ8) Nucleolar GTP-binding protein 1|
          Length = 528

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 20/87 (22%), Positives = 39/87 (44%)
 Frame = -1

Query: 485 PFIGRLREVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLV 306
           P   +  +V+   +  L  E  +  E   ++ RL E      SWK  +   G D+A+ + 
Sbjct: 430 PMYCKTYDVLSPEERALKEEVVAGIERRRIINRLREKKRLPDSWKHRSRNSGGDIAVHVR 489

Query: 305 RVHCKEVREEKLKALKVANTKKLRFED 225
           R    + + +  +  ++ + KK RF+D
Sbjct: 490 R----DSKTQVAQPPRLPSKKKARFDD 512

>LVA_DROME (Q8MSS1) Protein lava lamp|
          Length = 2779

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = -1

Query: 464  EVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLVRVHCKEV 285
            ++  R DE++    E   E+ +L  R+EE+    Q+ K        +  L L+R+  K++
Sbjct: 2287 DMASRNDEQMAQLQEKESEIVHLKQRIEELMREDQTEKLVFEILTKNQELQLLRMQVKQL 2346

Query: 284  REEK 273
             E+K
Sbjct: 2347 EEDK 2350

>ACM4_XENLA (P30544) Muscarinic acetylcholine receptor M4|
          Length = 484

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = -1

Query: 314 SLVRVHCKEVREEK------LKALKVANTKKLRFEDFMETFLESATRIADG 180
           S VR HC E R+EK      +K+L +  TK +  +D  +  +E    +++G
Sbjct: 225 SRVRRHCPETRQEKKKPISSMKSLLIKQTKNIPKQDAGDKVVEKKNGVSNG 275

>RF1_CLOTE (Q898Y5) Peptide chain release factor 1 (RF-1)|
          Length = 355

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 64  SSGQSSLQINTRHTEDKFSYASSGLAPGLEDSTNVSRSIPSAMRVALSRKVSMKSSNRS 240
           +SG     +NT  +  + ++  SGL    +D  +  ++   AM+V  SR   M  S RS
Sbjct: 227 ASGHGGQCVNTTDSAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESERS 285

>APOA1_MESAU (Q9Z2L4) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 264

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 491 VGPFIGRLREVVGRIDEELWP--EDESRQEMENLMTRLEEIPNRVQSW 354
           +G  +GRL+E +G + +E W   E E+      +   LEE+  +VQ +
Sbjct: 76  LGSTVGRLQEQLGPVTQEFWDNLEKETEWLRREMNKDLEEVKAKVQPY 123

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 46  KNVTANSSGQSSLQINTRHTEDKFSYASSGLAPGLEDSTNVSRSIPSAMRVALSR 210
           +NVTA +    +++ N    E++FSY SS     L  ST    S  S+  + L R
Sbjct: 556 RNVTAMNGSFQNMRSNFMDQENRFSYGSSFTYSSLGSSTQGGFSTLSSNSIRLGR 610

>ADY3_YEAST (Q07732) Accumulates dyads protein 3|
          Length = 790

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
 Frame = -1

Query: 464 EVVGRIDEELWPEDESRQEMENL-------MTRLEEIPNRVQSWKKSAARCGADVALSLV 306
           E +  + ++L  +D+  QE+E L       + R+E++     + +K+A++   ++     
Sbjct: 259 EEIKALRQKLEEKDDRIQELEELNSMNDAKLQRIEDLQKEFHNERKAASK-RLNIVQDRF 317

Query: 305 RVHCKEVREEKLKALKVANTKK 240
           R   K++REEK+   +  N  K
Sbjct: 318 RKEIKKIREEKITDFQNKNASK 339

>NDUA9_NEUCR (P25284) NADH-ubiquinone oxidoreductase 40 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-40KD) (CI-40KD)
          Length = 375

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 248 TKKLRFEDFMETFLESATRIADGI---DLDTFVESSSPGANPDDA*ENLSSVCR 96
           TK   FED     +E A RIA+ +   D+D F+  SS  A+P+   E  ++  R
Sbjct: 133 TKNFSFED---VHIEGAERIAEAVAKYDVDRFIHVSSYNADPNSECEFFATKAR 183

>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1
           kinase)
          Length = 806

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 14/62 (22%)
 Frame = +2

Query: 173 DRSRRRCGWHSQGRFP*SLR----------IEVSSCWRPS----MLSASPRAPPCNELGP 310
           D   RR G   Q RF  SL+          +E+ S W PS    M S  P  PPC++  P
Sbjct: 387 DFHARREGIRQQIRFQPSLQPVASEPVCPDVEMPSPWAPSGDCAMESPPPALPPCSDPAP 446

Query: 311 GT 316
            T
Sbjct: 447 DT 448

>MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)|
          Length = 539

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 24/110 (21%), Positives = 45/110 (40%)
 Frame = -1

Query: 479 IGRLREVVGRIDEELWPEDESRQEMENLMTRLEEIPNRVQSWKKSAARCGADVALSLVRV 300
           I ++      +DEEL    E  Q  E+    L +  N+++S            ++  +  
Sbjct: 192 ISKMNAEKKHVDEELKDRTEQLQAAEDKCNNLNKTKNKLES------------SIREIEQ 239

Query: 299 HCKEVREEKLKALKVANTKKLRFEDFMETFLESATRIADGIDLDTFVESS 150
             K+ ++ K+K  K     +   +D  +   E+ TR+ +  DL T  E S
Sbjct: 240 DLKKEKDSKMKLEKEKKKVESDLKDNRDKLSETETRLKETQDLVTKREKS 289

>ACOA_RALEU (P27745) Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha|
           subunit (EC 1.1.1.-) (Acetoin:DCPIP
           oxidoreductase-alpha) (AO:DCPIP OR)
          Length = 332

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 139 LIRMTRKKIYPRYAEC*FVRNFGHCCWPSHSWIGAGKLDPHRVN 8
           +IR  R+   P   EC  VR +GH    + ++  AG+LD  R N
Sbjct: 230 VIRRAREGGGPSLLECKMVRFYGHFEGDAQTYRAAGELDDIRAN 273


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.125    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,624,842
Number of Sequences: 219361
Number of extensions: 1538426
Number of successful extensions: 6118
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6115
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)