>SAR1A_ARATH (O04834) GTP-binding protein SAR1A|
          Length = 193

 Score =  150 bits (378), Expect = 5e-36
 Identities = 73/94 (77%), Positives = 77/94 (81%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 478
           KERF                A+VPFLILGNKIDIPYAASE+ELRYHLGLSNFTTGKGKVN
Sbjct: 100 KERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVN 159

Query: 477 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 376
           L DSNVRPLEVFMCS+VRKMGYG+GFKWVSQYIK
Sbjct: 160 LTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193

>SAR1A_BRACM (O04266) GTP-binding protein SAR1A|
          Length = 193

 Score =  145 bits (366), Expect = 1e-34
 Identities = 71/94 (75%), Positives = 76/94 (80%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 478
           KERF                A VPFLILGNKIDIPYAASE+ELRYHLGLSNFTTGKGKV+
Sbjct: 100 KERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVD 159

Query: 477 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 376
           LV SNVRPLEVFMCS+VRKMGYG+GFKW+SQYIK
Sbjct: 160 LVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193

>SAR1B_ARATH (Q01474) GTP-binding protein SAR1B|
          Length = 193

 Score =  139 bits (351), Expect = 6e-33
 Identities = 68/93 (73%), Positives = 73/93 (78%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 478
           KERF                A VPFLILGNKIDIPYAASE+ELRYHLGL+NFTTGKGKV 
Sbjct: 100 KERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVT 159

Query: 477 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 379
           L DS VRPLEVFMCS+VRKMGYG+GFKW+SQYI
Sbjct: 160 LGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192

>SAR2_LYCES (P52884) GTP-binding protein SAR2|
          Length = 193

 Score =  135 bits (340), Expect = 1e-31
 Identities = 63/94 (67%), Positives = 72/94 (76%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 478
           +ERF                 NVPFLILGNKIDIPYAASE+ELRYHLGL+  TTGKG +N
Sbjct: 100 RERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNIN 159

Query: 477 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 376
           L  +NVRP+EVFMCS+VRKMGYG+GFKW+SQYIK
Sbjct: 160 LAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193

>SAR1B_BRACM (O04267) GTP-binding protein SAR1B|
          Length = 195

 Score =  131 bits (329), Expect = 2e-30
 Identities = 66/95 (69%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 478
           KERF                A VPFLILGNKID PYAASE+ELRYHLGL+NFTTGKGKV 
Sbjct: 100 KERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVT 159

Query: 477 LV--DSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 379
               DS VRPLEVFMCS+VRKMGYG+GFKW+SQYI
Sbjct: 160 TAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194

>SAR1B_MOUSE (Q9CQC9) GTP-binding protein SAR1b|
          Length = 198

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 47/72 (65%), Positives = 56/72 (77%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           NVP LILGNKID P A SEE LR   GL   TTGKG V+L + N RPLEVFMCSV+++ G
Sbjct: 126 NVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQG 185

Query: 414 YGDGFKWVSQYI 379
           YG+GF+W++QYI
Sbjct: 186 YGEGFRWMAQYI 197

>SAR1B_CRIGR (Q9QVY3) GTP-binding protein SAR1b (Sar1) (GTBPB)|
          Length = 198

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 47/72 (65%), Positives = 56/72 (77%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           NVP LILGNKID P A SEE LR   GL   TTGKG V+L + N RPLEVFMCSV+++ G
Sbjct: 126 NVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQG 185

Query: 414 YGDGFKWVSQYI 379
           YG+GF+W++QYI
Sbjct: 186 YGEGFRWMAQYI 197

>SAR1B_HUMAN (Q9Y6B6) GTP-binding protein SAR1b (GTBPB)|
          Length = 198

 Score = 99.4 bits (246), Expect = 9e-21
 Identities = 46/72 (63%), Positives = 56/72 (77%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           NVP LILGNKID P A SEE LR   GL   TTGKG ++L + N RPLEVFMCSV+++ G
Sbjct: 126 NVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQG 185

Query: 414 YGDGFKWVSQYI 379
           YG+GF+W++QYI
Sbjct: 186 YGEGFRWMAQYI 197

>SAR1A_HUMAN (Q9NR31) GTP-binding protein SAR1a (COPII-associated small GTPase)|
          Length = 198

 Score = 96.3 bits (238), Expect = 8e-20
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           NVP LILGNKID   A SEE+LR   GL   TTGKG V L + N RP+EVFMCSV+++ G
Sbjct: 126 NVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQG 185

Query: 414 YGDGFKWVSQYI 379
           YG+GF+W+SQYI
Sbjct: 186 YGEGFRWLSQYI 197

>SAR1A_MOUSE (P36536) GTP-binding protein SAR1a|
          Length = 198

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           NVP LILGNKID   A SEE+LR   GL   TTGKG V L + N RP+EVFMCSV+++ G
Sbjct: 126 NVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQG 185

Query: 414 YGDGFKWVSQYI 379
           YG+GF+W+SQYI
Sbjct: 186 YGEGFRWLSQYI 197

>SAR1_TRIRE (P78976) GTP-binding protein SAR1|
          Length = 189

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 47/92 (51%), Positives = 59/92 (64%)
 Frame = -3

Query: 654 ERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 475
           ERF                + VPF+ILGNKID P A SE+ELR+ LGL   TTGKG+V L
Sbjct: 101 ERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL 159

Query: 474 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 379
               +RP+E+FMCSVV + GYGDG +W+S Y+
Sbjct: 160 --EGIRPIELFMCSVVMRQGYGDGIRWLSNYV 189

>SAR1_ASPNG (P52886) GTP-binding protein sarA|
          Length = 189

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMGY 412
           VPFLILGNKID P A SE+++R+ LGL   TTGKGKV L    +RP+EVFMCSVV + GY
Sbjct: 122 VPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGY 178

Query: 411 GDGFKWVSQYI 379
           G+G +W+SQY+
Sbjct: 179 GEGIRWLSQYV 189

>SAR1_SCHPO (Q01475) GTP-binding protein sar1|
          Length = 190

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMGY 412
           VPFLILGNKID P A SE+EL+  LGL   TTGKG V+     +RP+EVFMCSVV + GY
Sbjct: 122 VPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVVLRQGY 179

Query: 411 GDGFKWVSQYI 379
           G+GFKW++QY+
Sbjct: 180 GEGFKWLAQYV 190

>SAR1_CAEEL (Q23445) GTP-binding protein SAR1|
          Length = 193

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 37/72 (51%), Positives = 54/72 (75%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMG 415
           +VP LILGNKID P A SE++L++ L + +  TGKG V+  +   RP+EVFMCSV+++ G
Sbjct: 122 SVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQG 181

Query: 414 YGDGFKWVSQYI 379
           YG+G +W+ QY+
Sbjct: 182 YGEGIRWLGQYL 193

>SAR1_PICPA (Q9P4C8) GTP-binding protein sar1|
          Length = 190

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 46/92 (50%), Positives = 55/92 (59%)
 Frame = -3

Query: 654 ERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 475
           ERF                + VP L+LGNKID   A SE ELR+ LGL   TTGK KV L
Sbjct: 101 ERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQL 159

Query: 474 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 379
           V+   RPLEVF CS+  + GYG+G +W+SQYI
Sbjct: 160 VEGQ-RPLEVFTCSIYLRQGYGEGIRWLSQYI 190

>SAR1_TOBAC (P52885) GTP-binding protein SAR1|
          Length = 198

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
 Frame = -3

Query: 657 KERFXXXXXXXXXXXXXXXXANVPFLILGN---KIDIPYAASEE-ELRYHLGLSNFTT-G 493
           KERF                    FL L N   +I+ P     +   RYH+G +  +   
Sbjct: 100 KERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLA 159

Query: 492 KGKVNLVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 376
           +GKVNL DSNVRP+EVFMCS+VR+MGYG+GF+W+SQYIK
Sbjct: 160 RGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198

>SAR1_YEAST (P20606) GTP-binding protein SAR1|
          Length = 190

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 45/92 (48%), Positives = 54/92 (58%)
 Frame = -3

Query: 654 ERFXXXXXXXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 475
           ERF                 +VPF+ILGNKID P A SE ELR  LGL N TTG  ++  
Sbjct: 104 ERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRIE- 161

Query: 474 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 379
                RP+EVFMCSVV + GY + F+W+SQYI
Sbjct: 162 ---GQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190

>SAR1_GIALA (Q8MQT8) GTP-binding protein Sar1|
          Length = 191

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 47/70 (67%)
 Frame = -3

Query: 588 PFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMGYG 409
           P LIL NK+DI  A S E +    G+ +  TGKG  NL  S+ RPLEVF CSV+ + GY 
Sbjct: 123 PILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNL-RSDQRPLEVFPCSVINRFGYT 181

Query: 408 DGFKWVSQYI 379
           DGFKW+S+Y+
Sbjct: 182 DGFKWLSKYL 191

>ARL3_CAEEL (O45379) ADP-ribosylation factor-like protein 3|
          Length = 184

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 24/72 (33%), Positives = 32/72 (44%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLVDSNVRPLEVFMCSVVRKMGY 412
           VP LI  NK D+  AAS EE+              K+NL     R   +  CS ++  G 
Sbjct: 120 VPVLIFANKQDLVTAASSEEI------------TRKLNLDLLRDRTWHIQACSALKNEGI 167

Query: 411 GDGFKWVSQYIK 376
            DG  WV+  +K
Sbjct: 168 NDGITWVASNLK 179

>ARL11_BOVIN (Q58DI9) ADP-ribosylation factor-like protein 11|
          Length = 182

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 594 NVPFLILGNKIDIPYAASEEELRYHLGLSNF 502
           +VP L+L NK ++P A S  E+R  LGL  F
Sbjct: 114 SVPLLVLANKQEVPQALSLPEIRDRLGLQGF 144

>ARL8A_XENTR (Q6P8C8) ADP-ribosylation factor-like protein 8A (ADP-ribosylation|
           factor-like protein 10B)
          Length = 186

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK DIP A  E+EL   + LS
Sbjct: 123 IPVLVLGNKRDIPGALDEKELIERMNLS 150

>ARL8A_HUMAN (Q96BM9) ADP-ribosylation factor-like protein 8A (ADP-ribosylation|
           factor-like protein 10B) (Novel small G protein
           indispensable for equal chromosome segregation 2)
          Length = 186

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E+EL   + LS
Sbjct: 123 IPVLVLGNKRDLPGALDEKELIEKMNLS 150

>ARL8A_CHICK (Q5ZKQ8) ADP-ribosylation factor-like protein 8A|
          Length = 186

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E+EL   + LS
Sbjct: 123 IPVLVLGNKRDLPGALDEKELIEKMNLS 150

>ARL11_MOUSE (Q6P3A9) ADP-ribosylation factor-like protein 11|
          Length = 176

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLSNF 502
           VPFL+L NK + P A    E+R  LGL  F
Sbjct: 115 VPFLVLANKQEAPGALPLLEIRNRLGLEGF 144

>ARL8B_RAT (Q66HA6) ADP-ribosylation factor-like protein 8B|
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150

>ARL8B_PONPY (Q5R6E7) ADP-ribosylation factor-like protein 8B|
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150

>ARL8B_MOUSE (Q9CQW2) ADP-ribosylation factor-like protein 8B (ADP-ribosylation|
           factor-like protein 10C) (Novel small G protein
           indispensable for equal chromosome segregation 1)
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150

>ARL8B_MACFA (Q4R4S4) ADP-ribosylation factor-like protein 8B|
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150

>ARL8B_HUMAN (Q9NVJ2) ADP-ribosylation factor-like protein 8B (ADP-ribosylation|
           factor-like protein 10C) (Novel small G protein
           indispensable for equal chromosome segregation 1)
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150

>ARL8B_BOVIN (Q2KI07) ADP-ribosylation factor-like protein 8B|
          Length = 186

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 591 VPFLILGNKIDIPYAASEEELRYHLGLS 508
           +P L+LGNK D+P A  E++L   + LS
Sbjct: 123 IPVLVLGNKRDLPNALDEKQLIEKMNLS 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,308,950
Number of Sequences: 219361
Number of extensions: 1800921
Number of successful extensions: 4106
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4095
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)