ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complet... 46 0.11
2gb|AC000389.1|AC000389 Genomic sequence from Human 17, complete ... 44 0.44
3gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08,... 44 0.44
4gb|AC161930.7| Mus musculus chromosome 7, clone RP23-157P17, com... 42 1.7
5emb|CR936842.21| Mouse DNA sequence from clone CH29-189K17 on ch... 42 1.7
6emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chr... 42 1.7
7gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 42 1.7
8emb|AL646054.20| Mouse DNA sequence from clone RP23-157N11 on ch... 42 1.7
9emb|AL671997.10| Mouse DNA sequence from clone DN-396O20 on chro... 42 1.7
10gb|AC099680.2| Homo sapiens chromosome 1 clone RP4-700A9, comple... 42 1.7
11emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, co... 42 1.7
12emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chro... 42 1.7
13gb|AY479964.1| Juglans nigra microsatellite wga332 sequence 40 6.8
14gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosom... 40 6.8
15gb|AC150492.2| Bos taurus BAC CH240-454H24 (Children's Hospital... 40 6.8
16gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome... 40 6.8
17ref|XM_451414.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09471g ... 40 6.8
18gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, com... 40 6.8
19gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Can... 40 6.8
20gb|AC156399.9| Mus musculus 6 BAC RP24-238J9 (Roswell Park Cance... 40 6.8
21gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome... 40 6.8
22emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chro... 40 6.8
23gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosom... 40 6.8
24emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chrom... 40 6.8
25gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, comple... 40 6.8
26gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence 40 6.8
27emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 i... 40 6.8
28emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.8
29gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete se... 40 6.8
30gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, comple... 40 6.8
31gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, comple... 40 6.8
32gb|AC024722.5| Homo sapiens BAC clone RP11-277E23 from 4, comple... 40 6.8
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
34gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, com... 40 6.8
35gb|AC141053.2| Homo sapiens chromosome 16 clone CTD-3076M17, com... 40 6.8
36gb|AC073506.11|AC073506 Arabidopsis thaliana chromosome 1 BAC F1... 40 6.8
37gb|AC017076.14| Homo sapiens BAC clone RP11-439M11 from 2, compl... 40 6.8
38gb|AC026336.20| Homo sapiens 12 BAC RP11-143E21 (Roswell Park Ca... 40 6.8
39emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 40 6.8
40dbj|AK071957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
41emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1... 40 6.8
42emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in... 40 6.8
43gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, com... 40 6.8
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
45emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 40 6.8
46gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, compl... 40 6.8
47emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chro... 40 6.8
48gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, co... 40 6.8
49gb|AC087859.3| Homo sapiens chromosome 3 clone RP11-34L16 map 3p... 40 6.8
50dbj|AB022281.1| Oryzias latipes gene for soluble guanylyl cyclas... 40 6.8 
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence
          Length = 135214

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 88     caaaatgtttctactactgaaaa 110
              |||||||||||||||||||||||
Sbjct: 111110 caaaatgtttctactactgaaaa 111088
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>gb|AC000389.1|AC000389 Genomic sequence from Human 17, complete sequence
          Length = 83024

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 95    tttctactactgaaaacatatgaacttgta 124
             |||||||||||| || ||||||||||||||
Sbjct: 33022 tttctactactggaagcatatgaacttgta 33051
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>gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08, complete sequence
          Length = 218698

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 197    aagaagaaatcatttcttcttt 218
              ||||||||||||||||||||||
Sbjct: 215817 aagaagaaatcatttcttcttt 215838
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>gb|AC161930.7| Mus musculus chromosome 7, clone RP23-157P17, complete sequence
          Length = 212109

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 367    catcaccaccaaaacatctgtaaca 391
              |||||||||||||||| ||||||||
Sbjct: 203707 catcaccaccaaaacaactgtaaca 203731
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>emb|CR936842.21| Mouse DNA sequence from clone CH29-189K17 on chromosome 1, complete
              sequence
          Length = 208212

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    gaacttgtacacaaacaaaca 136
              |||||||||||||||||||||
Sbjct: 202487 gaacttgtacacaaacaaaca 202467
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>emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chromosome 1 Contains part of
              a novel gene, a novel gene, a ribosomal protein S24 (RPS24)
              pseudogene, a mitochondrial ribosomal protein S21 (MRPS21)
              pseudogene and a CpG island, complete sequence
          Length = 147603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     aggttaatcaaaatgtttcta 100
              |||||||||||||||||||||
Sbjct: 146243 aggttaatcaaaatgtttcta 146263
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>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166471

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 380    acatctgtaacaaagccatag 400
              |||||||||||||||||||||
Sbjct: 112812 acatctgtaacaaagccatag 112832
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>emb|AL646054.20| Mouse DNA sequence from clone RP23-157N11 on chromosome 1 Contains the
             Cd28 gene for CD28 antigen, a lactate dehydrogenase
             pseudogene, a ribosomal protein S6 (Rps6) pseudogene,  a
             mortality factor 4 (MORF4) pseudogene, a eukaryotic
             translation initiation factor 4A1 (Eif4a1) pseudogene, the
             3' end of a variant of the Ctla4 gene for cytotoxic
             T-lymphocyte-associated protein 4 and two novel genes,
             complete sequence
          Length = 202305

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   gaacttgtacacaaacaaaca 136
             |||||||||||||||||||||
Sbjct: 13389 gaacttgtacacaaacaaaca 13409
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>emb|AL671997.10| Mouse DNA sequence from clone DN-396O20 on chromosome 1 Contains a
             ribosomal protein S6 (Rps6) pseudogene, complete sequence
          Length = 69346

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   gaacttgtacacaaacaaaca 136
             |||||||||||||||||||||
Sbjct: 59747 gaacttgtacacaaacaaaca 59767
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>gb|AC099680.2| Homo sapiens chromosome 1 clone RP4-700A9, complete sequence
          Length = 89056

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  aggttaatcaaaatgtttcta 100
           |||||||||||||||||||||
Sbjct: 640 aggttaatcaaaatgtttcta 660
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>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence
          Length = 229574

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    tttctactactgaaaacatat 115
             |||||||||||||||||||||
Sbjct: 88531 tttctactactgaaaacatat 88551
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>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
              sequence
          Length = 189540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 364    aaacatcaccaccaaaacatc 384
              |||||||||||||||||||||
Sbjct: 163323 aaacatcaccaccaaaacatc 163343
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>gb|AY479964.1| Juglans nigra microsatellite wga332 sequence
          Length = 350

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 tcgttgcaatttgtatatga 176
           ||||||||||||||||||||
Sbjct: 296 tcgttgcaatttgtatatga 315
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>gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosome 17, complete
             sequence
          Length = 169205

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ttcttcaaagcatttcaaag 319
             ||||||||||||||||||||
Sbjct: 47220 ttcttcaaagcatttcaaag 47239
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>gb|AC150492.2| Bos taurus  BAC CH240-454H24 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 185197

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    catttcttcttttcctcctt 226
              ||||||||||||||||||||
Sbjct: 180857 catttcttcttttcctcctt 180838
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>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence
          Length = 232770

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   gaaacatcaccaccaaaaca 382
             ||||||||||||||||||||
Sbjct: 41248 gaaacatcaccaccaaaaca 41229
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>ref|XM_451414.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09471g predicted mRNA
          Length = 4521

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  cctctccaagaagaaatcat 209
            ||||||||||||||||||||
Sbjct: 3764 cctctccaagaagaaatcat 3745
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>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence
          Length = 194261

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tatgaacttgtacacaaaca 132
             ||||||||||||||||||||
Sbjct: 22215 tatgaacttgtacacaaaca 22196
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>gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203455

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    acaactcacctctccaagaa 201
              ||||||||||||||||||||
Sbjct: 110898 acaactcacctctccaagaa 110917
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>gb|AC156399.9| Mus musculus 6 BAC RP24-238J9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 136911

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   acaactcacctctccaagaa 201
             ||||||||||||||||||||
Sbjct: 10171 acaactcacctctccaagaa 10190
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>gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome 10, complete sequence
          Length = 215437

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ttcttcttttcctccttaaa 229
              ||||||||||||||||||||
Sbjct: 170330 ttcttcttttcctccttaaa 170311
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>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
              sequence
          Length = 218000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    atgaaacatcaccaccaaaa 380
              ||||||||||||||||||||
Sbjct: 172161 atgaaacatcaccaccaaaa 172180
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>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence
          Length = 217404

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gaaacatcaccaccaaaaca 382
              ||||||||||||||||||||
Sbjct: 184027 gaaacatcaccaccaaaaca 184008
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>emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chromosome 17, complete
              sequence
          Length = 163007

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    gaagaaatcatttcttcttttcct 222
              ||||||||| ||||||||||||||
Sbjct: 103931 gaagaaatcttttcttcttttcct 103908
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>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ctcacctctccaagaagaaa 205
             ||||||||||||||||||||
Sbjct: 20293 ctcacctctccaagaagaaa 20274
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>gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 103  actgaaaacatatgaacttgtacacaaa 130
            ||||| ||||||| ||||||||||||||
Sbjct: 9694 actgataacatataaacttgtacacaaa 9721
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>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7,
              complete sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    acacaaacaaacaagcacag 143
              ||||||||||||||||||||
Sbjct: 165399 acacaaacaaacaagcacag 165418
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    cctctccaagaagaaatcat 209
              ||||||||||||||||||||
Sbjct: 828021 cctctccaagaagaaatcat 828040
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>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence
          Length = 165658

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tgtacacaaacaaacaagca 140
             ||||||||||||||||||||
Sbjct: 42899 tgtacacaaacaaacaagca 42918
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>gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, complete sequence
          Length = 191840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   aagaagaaatcatttcttct 216
             ||||||||||||||||||||
Sbjct: 74993 aagaagaaatcatttcttct 75012
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>gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, complete sequence
          Length = 177160

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     taggttaatcaaaatgtttctact 102
              |||| |||||||||||||||||||
Sbjct: 177044 taggataatcaaaatgtttctact 177067
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>gb|AC024722.5| Homo sapiens BAC clone RP11-277E23 from 4, complete sequence
          Length = 117928

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 79   taggttaatcaaaatgtttctact 102
            |||| |||||||||||||||||||
Sbjct: 1882 taggataatcaaaatgtttctact 1905
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      ggagtagcagcagtagagct 284
                ||||||||||||||||||||
Sbjct: 27161035 ggagtagcagcagtagagct 27161016
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>gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, complete sequence
          Length = 101561

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 203    aaatcatttcttcttttcctcctt 226
              ||||||||||| ||||||||||||
Sbjct: 100612 aaatcatttctccttttcctcctt 100589
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>gb|AC141053.2| Homo sapiens chromosome 16 clone CTD-3076M17, complete sequence
          Length = 98702

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   aaatcatttcttcttttcctcctt 226
             ||||||||||| ||||||||||||
Sbjct: 18533 aaatcatttctccttttcctcctt 18510
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>gb|AC073506.11|AC073506 Arabidopsis thaliana chromosome 1 BAC F12P21 genomic sequence, complete
             sequence
          Length = 55095

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   cacctagaagactttcttca 306
             ||||||||||||||||||||
Sbjct: 46605 cacctagaagactttcttca 46624
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>gb|AC017076.14| Homo sapiens BAC clone RP11-439M11 from 2, complete sequence
          Length = 118808

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   catttcttcttttcctcctt 226
             ||||||||||||||||||||
Sbjct: 29742 catttcttcttttcctcctt 29723
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>gb|AC026336.20| Homo sapiens 12 BAC RP11-143E21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169758

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   tttcctccttaaaccctgct 236
             ||||||||||||||||||||
Sbjct: 43905 tttcctccttaaaccctgct 43886
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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
             complete sequence
          Length = 209666

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   agcatttcaaagtgcttcatacaa 331
             ||||||| ||||||||||||||||
Sbjct: 59061 agcattttaaagtgcttcatacaa 59084
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>dbj|AK071957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M02, full
            insert sequence
          Length = 3542

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ggagtagcagcagtagagct 284
            ||||||||||||||||||||
Sbjct: 2414 ggagtagcagcagtagagct 2395
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>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE
          Length = 120939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aatcaaaatgtttctactac 104
             ||||||||||||||||||||
Sbjct: 15932 aatcaaaatgtttctactac 15951
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>emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in linkage group 19,
             complete sequence
          Length = 72609

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   tacacaaacaaacaagcaca 142
             ||||||||||||||||||||
Sbjct: 35892 tacacaaacaaacaagcaca 35911
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>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence
          Length = 206641

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tatgaacttgtacacaaaca 132
              ||||||||||||||||||||
Sbjct: 166015 tatgaacttgtacacaaaca 165996
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      ggagtagcagcagtagagct 284
                ||||||||||||||||||||
Sbjct: 27086635 ggagtagcagcagtagagct 27086616
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ggagtagcagcagtagagct 284
             ||||||||||||||||||||
Sbjct: 99934 ggagtagcagcagtagagct 99915
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>gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, complete sequence
          Length = 159923

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    atctggttcacaggcaagca 492
              ||||||||||||||||||||
Sbjct: 112079 atctggttcacaggcaagca 112060
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>emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chromosome X, complete
              sequence
          Length = 238677

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    tcatttcttcttttcctcct 225
              ||||||||||||||||||||
Sbjct: 159057 tcatttcttcttttcctcct 159076
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>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence
          Length = 185933

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 283    ctgccacctagaagactttcttca 306
              ||||||||||||| ||||||||||
Sbjct: 122071 ctgccacctagaaaactttcttca 122094
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>gb|AC087859.3| Homo sapiens chromosome 3 clone RP11-34L16 map 3p, complete sequence
          Length = 151927

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   aatcatttcttcttttcctcctta 227
             ||||||||||||||| ||||||||
Sbjct: 64508 aatcatttcttctttgcctcctta 64531
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>dbj|AB022281.1| Oryzias latipes gene for soluble guanylyl cyclase beta subunit,
            complete cds
          Length = 17366

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tcttcaaagcatttcaaagt 320
            ||||||||||||||||||||
Sbjct: 2953 tcttcaaagcatttcaaagt 2972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,958,889
Number of Sequences: 3902068
Number of extensions: 6958889
Number of successful extensions: 141454
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141272
Number of HSP's gapped (non-prelim): 182
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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