ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC102661.7| Mus musculus chromosome 3, clone RP23-114K16, com... 46 0.15
2gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosom... 44 0.60
3emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chr... 44 0.60
4emb|AL731562.10| Mouse DNA sequence from clone RP23-49B3 on chro... 44 0.60
5emb|BX322549.5| Zebrafish DNA sequence from clone DKEYP-9D12 in ... 44 0.60
6gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome... 42 2.4
7emb|AL357654.9| Human DNA sequence from clone RP5-1025P18 on chr... 42 2.4
8emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chr... 42 2.4
9gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosom... 42 2.4
10emb|AL929217.14| Zebrafish DNA sequence from clone CH211-148A2, ... 42 2.4
11emb|AL935045.6| Zebrafish DNA sequence from clone CH211-183M1, c... 42 2.4
12gb|AC148970.3| Medicago truncatula chromosome 2 BAC clone mth2-7... 40 9.3
13gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chrom... 40 9.3
14emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in... 40 9.3
15emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in... 40 9.3
16emb|BX664705.10| Zebrafish DNA sequence from clone DKEY-11E6 in ... 40 9.3
17emb|AL953870.2| Human DNA sequence from clone RP11-97N5 on chrom... 40 9.3
18emb|AL159170.14| Human DNA sequence from clone RP11-192N10 on ch... 40 9.3
19gb|AC182842.3| Pan troglodytes BAC clone CH251-38C10 from chromo... 40 9.3
20gb|AC087883.12| Homo sapiens 12q BAC RP11-335M9 (Roswell Park Ca... 40 9.3
21emb|CR388028.12| Zebrafish DNA sequence from clone DKEYP-36B12 i... 40 9.3
22gb|U15596.1|CLU15596 Chiridota laevis mitochondrion 16S ribosoma... 40 9.3
23emb|BX537296.9| Zebrafish DNA sequence from clone DKEYP-86D4 in ... 40 9.3
24gb|AC012022.13| Homo sapiens 3 BAC RP11-117L15 (Roswell Park Can... 40 9.3
25emb|BX649628.11| Zebrafish DNA sequence from clone CH211-231M1 i... 40 9.3
26gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chrom... 40 9.3
27emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, co... 40 9.3
28emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 i... 40 9.3
29gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome ... 40 9.3
30gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, compl... 40 9.3
31gb|AC124319.13| Homo sapiens chromosome 17, clone CTD-2047H16, c... 40 9.3
32gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, comp... 40 9.3
33emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in... 40 9.3
34emb|BX005413.7| Zebrafish DNA sequence from clone DKEY-209E17 in... 40 9.3
35emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on ch... 40 9.3
36emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in ... 40 9.3
37gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, comp... 40 9.3
38emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-2... 40 9.3
39emb|AL355073.5|CNS05TC7 Human chromosome 14 DNA sequence BAC R-9... 40 9.3
40gb|AE015927.1| Clostridium tetani E88, complete genome 40 9.3
41emb|BX005042.5| Zebrafish DNA sequence from clone CH211-119F9 in... 40 9.3
42emb|AL929372.16| Mouse DNA sequence from clone RP23-461G6 on chr... 40 9.3
43emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 9.3
44emb|BX927341.21| Zebrafish DNA sequence from clone DKEY-56J1 in ... 40 9.3
45gb|M27044.1|RATFSHB1 Rat follicle stimluating hormone beta subun... 40 9.3
46emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 40 9.3 
>gb|AC102661.7| Mus musculus chromosome 3, clone RP23-114K16, complete sequence
          Length = 176493

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 456    ctctttcattgatcttatagttc 478
              |||||||||||||||||||||||
Sbjct: 120527 ctctttcattgatcttatagttc 120505
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>gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosome 8, complete sequence
          Length = 209062

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 643    acttgtggcttccacccttgga 664
              ||||||||||||||||||||||
Sbjct: 170096 acttgtggcttccacccttgga 170117
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>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 191715

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 541    atcttcctttcccacccaggag 562
              ||||||||||||||||||||||
Sbjct: 190425 atcttcctttcccacccaggag 190404
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>emb|AL731562.10| Mouse DNA sequence from clone RP23-49B3 on chromosome 13, complete
           sequence
          Length = 81954

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 541 atcttcctttcccacccaggag 562
           ||||||||||||||||||||||
Sbjct: 710 atcttcctttcccacccaggag 689
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>emb|BX322549.5| Zebrafish DNA sequence from clone DKEYP-9D12 in linkage group 24,
             complete sequence
          Length = 62252

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   actagtttagttttctcttttt 212
             ||||||||||||||||||||||
Sbjct: 23095 actagtttagttttctcttttt 23074
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>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence
          Length = 186848

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 603    gccattaccctcagacatatcagtt 627
              ||||||||||| |||||||||||||
Sbjct: 167286 gccattacccttagacatatcagtt 167310
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>emb|AL357654.9| Human DNA sequence from clone RP5-1025P18 on chromosome 20 Contains
            part of the gene for a novel protein (LOC284776),
            complete sequence
          Length = 22651

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 110  aagataatacaacaaaatagc 130
            |||||||||||||||||||||
Sbjct: 4796 aagataatacaacaaaatagc 4816
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>emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 93419

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 167   attttcttctttctagagagcatca 191
             ||||||||||||||||||| |||||
Sbjct: 16191 attttcttctttctagagatcatca 16167
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>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete
             sequence
          Length = 227632

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 603   gccattaccctcagacatatcagtt 627
             ||||||||||| |||||||||||||
Sbjct: 19563 gccattacccttagacatatcagtt 19539
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>emb|AL929217.14| Zebrafish DNA sequence from clone CH211-148A2, complete sequence
          Length = 130060

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   ctgggttgtcttcaagatact 448
             |||||||||||||||||||||
Sbjct: 91163 ctgggttgtcttcaagatact 91143
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>emb|AL935045.6| Zebrafish DNA sequence from clone CH211-183M1, complete sequence
          Length = 149814

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   ctgggttgtcttcaagatact 448
             |||||||||||||||||||||
Sbjct: 67302 ctgggttgtcttcaagatact 67282
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>gb|AC148970.3| Medicago truncatula chromosome 2 BAC clone mth2-74j13, complete
             sequence
          Length = 83100

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   atcactagtttagttttctctttt 211
             ||||||||||||||||| ||||||
Sbjct: 19093 atcactagtttagttttttctttt 19070
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>gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chromosome x, complete
              sequence
          Length = 188826

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    agtaagataatacaacaaaa 126
              ||||||||||||||||||||
Sbjct: 137131 agtaagataatacaacaaaa 137150
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>emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in linkage group 14,
             complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 73759 ttctgcctgcaagagagata 73778
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>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8,
             complete sequence
          Length = 242845

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 86521 ttctgcctgcaagagagata 86502
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>emb|BX664705.10| Zebrafish DNA sequence from clone DKEY-11E6 in linkage group 8,
            complete sequence
          Length = 122433

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  ttctgcctgcaagagagata 495
            ||||||||||||||||||||
Sbjct: 3741 ttctgcctgcaagagagata 3722
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>emb|AL953870.2| Human DNA sequence from clone RP11-97N5 on chromosome X Contains the
             gene for sarcoma antigen (SAGE), a novel pseudogene and
             the 3' end of a novel gene (LOC93380), complete sequence
          Length = 69776

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agtaagataatacaacaaaa 126
             ||||||||||||||||||||
Sbjct: 16157 agtaagataatacaacaaaa 16138
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>emb|AL159170.14| Human DNA sequence from clone RP11-192N10 on chromosome 10 Contains the
             5' end of the SVIL gene for supervillin (archvillin), a
             CDC28 protein kinase regulatory subunit 1B (CKS1B)
             pseudogene and two CpG islands, complete sequence
          Length = 146810

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tagaacacatacagtaagat 114
             ||||||||||||||||||||
Sbjct: 37331 tagaacacatacagtaagat 37350
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>gb|AC182842.3| Pan troglodytes BAC clone CH251-38C10 from chromosome x, complete
              sequence
          Length = 206627

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    agtaagataatacaacaaaa 126
              ||||||||||||||||||||
Sbjct: 194645 agtaagataatacaacaaaa 194626



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agtaagataatacaacaaaa 126
             ||||||||||||||||||||
Sbjct: 62465 agtaagataatacaacaaaa 62484
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>gb|AC087883.12| Homo sapiens 12q BAC RP11-335M9 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161166

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gttttctctttttggggagc 219
             ||||||||||||||||||||
Sbjct: 61796 gttttctctttttggggagc 61815
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>emb|CR388028.12| Zebrafish DNA sequence from clone DKEYP-36B12 in linkage group 8,
             complete sequence
          Length = 173485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 62806 ttctgcctgcaagagagata 62825
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>gb|U15596.1|CLU15596 Chiridota laevis mitochondrion 16S ribosomal RNA, partial sequence
          Length = 462

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 tttagttttctctttttggg 215
           ||||||||||||||||||||
Sbjct: 227 tttagttttctctttttggg 208
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>emb|BX537296.9| Zebrafish DNA sequence from clone DKEYP-86D4 in linkage group 14,
             complete sequence
          Length = 203251

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 90223 ttctgcctgcaagagagata 90242
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>gb|AC012022.13| Homo sapiens 3 BAC RP11-117L15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167994

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tagtttagttttctcttttt 212
             ||||||||||||||||||||
Sbjct: 37140 tagtttagttttctcttttt 37121
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>emb|BX649628.11| Zebrafish DNA sequence from clone CH211-231M1 in linkage group 6,
             complete sequence
          Length = 155714

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 70808 ttctgcctgcaagagagata 70789
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>gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chromosome x, complete
              sequence
          Length = 193874

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    agtaagataatacaacaaaa 126
              ||||||||||||||||||||
Sbjct: 123942 agtaagataatacaacaaaa 123961
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>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence
          Length = 156514

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 62217 ttctgcctgcaagagagata 62198
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>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15,
             complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 78107 ttctgcctgcaagagagata 78126
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>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence
          Length = 200650

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aaaatgtttcccagttccag 47
             ||||||||||||||||||||
Sbjct: 70175 aaaatgtttcccagttccag 70156
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>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tacaacaaaatagcatattt 136
             ||||||||||||||||||||
Sbjct: 45102 tacaacaaaatagcatattt 45121
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>gb|AC124319.13| Homo sapiens chromosome 17, clone CTD-2047H16, complete sequence
          Length = 121112

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 548   tttcccacccaggaggggtatgag 571
             |||||||||||||| |||||||||
Sbjct: 71965 tttcccacccaggatgggtatgag 71988
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>gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, complete sequence
          Length = 88190

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 548   tttcccacccaggaggggtatgag 571
             |||||||||||||| |||||||||
Sbjct: 36258 tttcccacccaggatgggtatgag 36235
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>emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in linkage group 4, complete
              sequence
          Length = 172729

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    ttctgcctgcaagagagata 495
              ||||||||||||||||||||
Sbjct: 111220 ttctgcctgcaagagagata 111239
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>emb|BX005413.7| Zebrafish DNA sequence from clone DKEY-209E17 in linkage group 6,
              complete sequence
          Length = 149192

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    ttctgcctgcaagagagata 495
              ||||||||||||||||||||
Sbjct: 122851 ttctgcctgcaagagagata 122870
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>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete
            sequence
          Length = 202001

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 631  tcatggcatgtaacttgtggcttc 654
            |||||||||||||||| |||||||
Sbjct: 5061 tcatggcatgtaacttatggcttc 5084
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>emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in linkage group 18,
             complete sequence
          Length = 148650

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   gtttagttttctctttttggggag 218
             |||| |||||||||||||||||||
Sbjct: 28639 gttttgttttctctttttggggag 28616
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>gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, complete sequence
          Length = 202822

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   ctagagagcatcactagttt 198
             ||||||||||||||||||||
Sbjct: 71960 ctagagagcatcactagttt 71941
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>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164550

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   agcattttcttctttctaga 183
             ||||||||||||||||||||
Sbjct: 99155 agcattttcttctttctaga 99174
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>emb|AL355073.5|CNS05TC7 Human chromosome 14 DNA sequence BAC R-930O11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175988

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    agcattttcttctttctaga 183
              ||||||||||||||||||||
Sbjct: 115736 agcattttcttctttctaga 115717
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 446     actttttgagctctttcatt 465
               ||||||||||||||||||||
Sbjct: 2782067 actttttgagctctttcatt 2782086
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>emb|BX005042.5| Zebrafish DNA sequence from clone CH211-119F9 in linkage group 2,
             complete sequence
          Length = 173926

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 24711 ttctgcctgcaagagagata 24730
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>emb|AL929372.16| Mouse DNA sequence from clone RP23-461G6 on chromosome 2, complete
              sequence
          Length = 170342

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    aacaaaatagcatatttcaa 139
              ||||||||||||||||||||
Sbjct: 153696 aacaaaatagcatatttcaa 153677
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>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10,
             complete sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttctgcctgcaagagagata 495
             ||||||||||||||||||||
Sbjct: 76612 ttctgcctgcaagagagata 76593
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>emb|BX927341.21| Zebrafish DNA sequence from clone DKEY-56J1 in linkage group 14, complete
              sequence
          Length = 203575

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    ttctgcctgcaagagagata 495
              ||||||||||||||||||||
Sbjct: 172439 ttctgcctgcaagagagata 172420
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>gb|M27044.1|RATFSHB1 Rat follicle stimluating hormone beta subunit (FSH-beta) gene,
           segment 1
          Length = 1932

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 catcactaagagcattttct 173
           ||||||||||||||||||||
Sbjct: 830 catcactaagagcattttct 849
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
            sequence
          Length = 182054

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  gagtaatcttcctttcccac 555
            ||||||||||||||||||||
Sbjct: 6375 gagtaatcttcctttcccac 6394


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,222,794
Number of Sequences: 3902068
Number of extensions: 6222794
Number of successful extensions: 118800
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118666
Number of HSP's gapped (non-prelim): 134
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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