ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28m15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, comp... 190 1e-45
2ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predic... 135 6e-29
3emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 135 6e-29
4emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 135 6e-29
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 135 6e-29
6dbj|D29720.1|RICYK33 Oryza sativa mRNA, partial homologous to ri... 135 6e-29
7dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 6e-29
8gb|AY103677.1| Zea mays PCO099976 mRNA sequence 107 1e-20
9ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA 105 5e-20
10gb|BT016468.1| Zea mays clone Contig301 mRNA sequence 105 5e-20
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 105 5e-20
12dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 105 5e-20
13dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-20
14dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-20
15gb|AY104655.1| Zea mays PCO101521 mRNA sequence 105 5e-20
16gb|AY109992.1| Zea mays CL9168_1 mRNA sequence 96 5e-17
17gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence 88 1e-14
18ref|NM_202576.1| Arabidopsis thaliana structural constituent of ... 78 1e-11
19ref|NM_202575.1| Arabidopsis thaliana structural constituent of ... 78 1e-11
20ref|NM_112204.2| Arabidopsis thaliana structural constituent of ... 78 1e-11
21gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 78 1e-11
22gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 78 1e-11
23gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-1... 78 1e-11
24gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 78 1e-11
25emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Co... 78 1e-11
26emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Co... 78 1e-11
27emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Co... 78 1e-11
28emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Co... 78 1e-11
29dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 78 1e-11
30ref|NM_180079.1| Arabidopsis thaliana structural constituent of ... 74 2e-10
31ref|NM_180080.1| Arabidopsis thaliana structural constituent of ... 74 2e-10
32gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map... 74 2e-10
33gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At... 74 2e-10
34gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6... 74 2e-10
35gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 m... 74 2e-10
36gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, com... 74 2e-10
37gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete s... 74 2e-10
38ref|NM_126186.2| Arabidopsis thaliana structural constituent of ... 70 3e-09
39gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L... 70 3e-09
40gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L... 70 3e-09
41gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map... 70 3e-09
42gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At... 70 3e-09
43gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protei... 70 3e-09
44emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Co... 70 3e-09
45gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete s... 70 3e-09
46gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, comple... 66 5e-08
47emb|BX825608.1|CNS0A7J7 Arabidopsis thaliana Full-length cDNA Co... 64 2e-07
48ref|XM_741482.1| Aspergillus fumigatus Af293 60S ribosomal prote... 56 5e-05
49gb|AY440507.1| Armigeres subalbatus ASAP ID: 40391 cytosolic lar... 48 0.011
50gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 48 0.011
51ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 6... 48 0.011
52gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribos... 46 0.043
53ref|XM_779123.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 0.68
54gb|AY433771.1| Aedes aegypti ASAP ID: 34421 cytosolic large ribo... 40 2.7
55gb|DQ440213.1| Aedes aegypti clone AET-2196 ribosomal protein L7... 40 2.7
56ref|XM_659619.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 2.7
57gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome... 40 2.7
58gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosom... 40 2.7
59ref|XM_386034.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 2.7
60emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M1... 40 2.7
61gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer... 40 2.7
62gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosom... 40 2.7 
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds
          Length = 787

 Score =  190 bits (96), Expect = 1e-45
 Identities = 102/104 (98%)
 Strand = Plus / Minus

                                                                       
Query: 108 cattcaacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcg 167
           |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 787 cattcaacctagttcatccttctaacaagctggttgatgtagttctcacggttcccagcg 728

                                                       
Query: 168 tcaccaccctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcaccaccctcgacgtagtggttcctcttcttcttcaggccacc 684
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>ref|XM_473801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                       
Query: 116 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
           ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 753 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 694

                                               
Query: 176 ctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||| |||||||||||||||||||||||||| |||||
Sbjct: 693 ctcaacgtagtggttcctcttcttcttcagcccacc 658
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
              complete sequence
          Length = 129037

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                          
Query: 116    ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
              ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111788 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 111729

                                                  
Query: 176    ctcgacgtagtggttcctcttcttcttcaggccacc 211
              ||| |||||||||||||||||||||||||| |||||
Sbjct: 111728 ctcaacgtagtggttcctcttcttcttcagcccacc 111693
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                         
Query: 116   ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
             ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 39811 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 39752

                                                 
Query: 176   ctcgacgtagtggttcctcttcttcttcaggccacc 211
             ||| |||||||||||||||||||||||||| |||||
Sbjct: 39751 ctcaacgtagtggttcctcttcttcttcagcccacc 39716
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                            
Query: 116      ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
                ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 30636080 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 30636021

                                                    
Query: 176      ctcgacgtagtggttcctcttcttcttcaggccacc 211
                ||| |||||||||||||||||||||||||| |||||
Sbjct: 30636020 ctcaacgtagtggttcctcttcttcttcagcccacc 30635985
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>dbj|D29720.1|RICYK33 Oryza sativa mRNA, partial homologous to ribosomal protein L7 gene
          Length = 297

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                       
Query: 116 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
           ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 139 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 80

                                               
Query: 176 ctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||| |||||||||||||||||||||||||| |||||
Sbjct: 79  ctcaacgtagtggttcctcttcttcttcagcccacc 44
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>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full
           insert sequence
          Length = 1040

 Score =  135 bits (68), Expect = 6e-29
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                       
Query: 116 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 175
           ||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 850 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 791

                                               
Query: 176 ctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||| |||||||||||||||||||||||||| |||||
Sbjct: 790 ctcaacgtagtggttcctcttcttcttcagcccacc 755
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>gb|AY103677.1| Zea mays PCO099976 mRNA sequence
          Length = 1103

 Score =  107 bits (54), Expect = 1e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                       
Query: 115 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
           |||||||||||||  | | ||||| ||||||||||||||||||||| || |||||||| |
Sbjct: 849 cctagttcatcctcttgatgagctcgttgatgtagttctcacggtttccggcgtcaccgc 790

                                             
Query: 175 cctcgacgtagtggttcctcttcttcttcaggcc 208
           |||| ||||||||||||||||||||||| |||||
Sbjct: 789 cctccacgtagtggttcctcttcttcttgaggcc 756
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>ref|XM_480842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1084

 Score =  105 bits (53), Expect = 5e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 115 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
           ||||||||||||| |  | ||||| ||||||||||| ||||||||| || || |||||||
Sbjct: 794 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 735

                                                
Query: 175 cctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||||||| |||||||||||||||||||| ||||||||
Sbjct: 734 cctcgacatagtggttcctcttcttcttgaggccacc 698
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>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence
          Length = 1198

 Score =  105 bits (53), Expect = 5e-20
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                       
Query: 113 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 172
           |||||| ||||||||| | | ||||| ||||||||| |||||||||||||| || |||||
Sbjct: 785 aacctaattcatccttttgatgagctcgttgatgtaattctcacggttaccggcatcacc 726

                                            
Query: 173 accctcgacgtagtggttcctcttcttcttcag 205
           |||||| || |||||||||||||||||||||||
Sbjct: 725 accctccacatagtggttcctcttcttcttcag 693
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  105 bits (53), Expect = 5e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 115     cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
               ||||||||||||| |  | ||||| ||||||||||| ||||||||| || || |||||||
Sbjct: 8149182 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 8149123

                                                    
Query: 175     cctcgacgtagtggttcctcttcttcttcaggccacc 211
               ||||||| |||||||||||||||||||| ||||||||
Sbjct: 8149122 cctcgacatagtggttcctcttcttcttgaggccacc 8149086
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>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1047A05
          Length = 157517

 Score =  105 bits (53), Expect = 5e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                          
Query: 115    cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
              ||||||||||||| |  | ||||| ||||||||||| ||||||||| || || |||||||
Sbjct: 117493 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 117434

                                                   
Query: 175    cctcgacgtagtggttcctcttcttcttcaggccacc 211
              ||||||| |||||||||||||||||||| ||||||||
Sbjct: 117433 cctcgacatagtggttcctcttcttcttgaggccacc 117397
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>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full
           insert sequence
          Length = 1084

 Score =  105 bits (53), Expect = 5e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 115 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
           ||||||||||||| |  | ||||| ||||||||||| ||||||||| || || |||||||
Sbjct: 794 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 735

                                                
Query: 175 cctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||||||| |||||||||||||||||||| ||||||||
Sbjct: 734 cctcgacatagtggttcctcttcttcttgaggccacc 698
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>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full
           insert sequence
          Length = 594

 Score =  105 bits (53), Expect = 5e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 115 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 174
           ||||||||||||| |  | ||||| ||||||||||| ||||||||| || || |||||||
Sbjct: 355 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 296

                                                
Query: 175 cctcgacgtagtggttcctcttcttcttcaggccacc 211
           ||||||| |||||||||||||||||||| ||||||||
Sbjct: 295 cctcgacatagtggttcctcttcttcttgaggccacc 259
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>gb|AY104655.1| Zea mays PCO101521 mRNA sequence
          Length = 1155

 Score =  105 bits (53), Expect = 5e-20
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                       
Query: 113 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 172
           |||||| ||||||||| | | ||||| ||||||||| |||||||||||||| || |||||
Sbjct: 798 aacctaattcatccttttgatgagctcgttgatgtaattctcacggttaccggcatcacc 739

                                            
Query: 173 accctcgacgtagtggttcctcttcttcttcag 205
           |||||| || |||||||||||||||||||||||
Sbjct: 738 accctccacatagtggttcctcttcttcttcag 706
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>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence
          Length = 1226

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                       
Query: 113 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 172
           |||||| ||||||||| | | |||||  |||||||||||||| |||||||| || |||||
Sbjct: 453 aacctaattcatccttttgatgagctcattgatgtagttctcgcggttaccggcatcacc 512

                                               
Query: 173 accctcgacgtagtggttcctcttcttcttcaggcc 208
            ||||| || ||||||||||||||||||||||||||
Sbjct: 513 gccctccacatagtggttcctcttcttcttcaggcc 548
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>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence
          Length = 922

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 113 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 172
           |||||| ||||||||| | | |||||  |||||||||||||| |||||||| || || ||
Sbjct: 733 aacctaattcatccttttgatgagctcattgatgtagttctcgcggttaccggcatcgcc 674

                                               
Query: 173 accctcgacgtagtggttcctcttcttcttcaggcc 208
            ||||| || ||||||||||||||||||||||||||
Sbjct: 673 gccctccacatagtggttcctcttcttcttcaggcc 638
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>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome /
            transcription regulator AT3G13580 transcript variant
            AT3G13580.3 mRNA, complete cds
          Length = 1569

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
            ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 1371 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 1312

                                       
Query: 178  cgacgtagtggttcctcttcttcttca 204
            | ||||| |||||||||||||||||||
Sbjct: 1311 ccacgtaatggttcctcttcttcttca 1285
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>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome /
            transcription regulator AT3G13580 transcript variant
            AT3G13580.2 mRNA, complete cds
          Length = 1225

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
            ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 1027 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 968

                                       
Query: 178  cgacgtagtggttcctcttcttcttca 204
            | ||||| |||||||||||||||||||
Sbjct: 967  ccacgtaatggttcctcttcttcttca 941
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>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT3G13580 transcript variant
           AT3G13580.1 mRNA, complete cds
          Length = 995

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 737 ccacgtaatggttcctcttcttcttca 711
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>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 735

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 733 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 674

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 673 ccacgtaatggttcctcttcttcttca 647
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>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 971

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 737 ccacgtaatggttcctcttcttcttca 711
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>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete
            sequence
          Length = 105682

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 113  aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 172
            |||||| ||||||||||||| ||| |  |||||||||| ||| | ||||||||| |||||
Sbjct: 3617 aacctaattcatccttctaatgagttcattgatgtagtcctccctgttaccagcatcacc 3558

                                                   
Query: 173  accctcgacgtagtggttcctcttcttcttcaggccacc 211
            ||| || || ||||| || ||||||||||||| ||||||
Sbjct: 3557 accttcaacatagtgatttctcttcttcttcatgccacc 3519
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>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 966

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 737 ccacgtaatggttcctcttcttcttca 711
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>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB1ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 943

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 779 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 720

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 719 ccacgtaatggttcctcttcttcttca 693
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>emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH79ZF10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1504

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
            ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 1371 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 1312

                                       
Query: 178  cgacgtagtggttcctcttcttcttca 204
            | ||||| |||||||||||||||||||
Sbjct: 1311 ccacgtaatggttcctcttcttcttca 1285
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>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1136

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
            ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 1023 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 964

                                       
Query: 178  cgacgtagtggttcctcttcttcttca 204
            | ||||| |||||||||||||||||||
Sbjct: 963  ccacgtaatggttcctcttcttcttca 937
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>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 895

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
           ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 765 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 706

                                      
Query: 178 cgacgtagtggttcctcttcttcttca 204
           | ||||| |||||||||||||||||||
Sbjct: 705 ccacgtaatggttcctcttcttcttca 679
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>dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K20M4
          Length = 25790

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 177
            ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || |
Sbjct: 5750 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 5691

                                       
Query: 178  cgacgtagtggttcctcttcttcttca 204
            | ||||| |||||||||||||||||||
Sbjct: 5690 ccacgtaatggttcctcttcttcttca 5664
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>ref|NM_180079.1| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT2G44120 transcript variant
           AT2G44120.1 mRNA, complete cds
          Length = 981

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 789 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 730

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 729 ttcttcttaaggccacc 713
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>ref|NM_180080.1| Arabidopsis thaliana structural constituent of ribosome /
            transcription regulator AT2G44120 transcript variant
            AT2G44120.2 mRNA, complete cds
          Length = 1220

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 135  agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
            |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 1016 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 957

                             
Query: 195  ttcttcttcaggccacc 211
            |||||||| ||||||||
Sbjct: 956  ttcttcttaaggccacc 940
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>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
             complete sequence
          Length = 109741

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 135   agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
             |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 79513 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 79572

                              
Query: 195   ttcttcttcaggccacc 211
             |||||||| ||||||||
Sbjct: 79573 ttcttcttaaggccacc 79589
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>gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g44120) mRNA,
           complete cds
          Length = 782

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 710 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 651

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 650 ttcttcttaaggccacc 634
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>gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6E13.25; At2g44120)
           mRNA, complete cds
          Length = 888

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 752 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 693

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 692 ttcttcttaaggccacc 676
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>gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds
          Length = 729

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 710 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 651

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 650 ttcttcttaaggccacc 634
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>gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds
          Length = 905

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 752 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 693

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 692 ttcttcttaaggccacc 676
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>gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete sequence
          Length = 1221

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 135  agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
            |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| |||
Sbjct: 1016 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 957

                             
Query: 195  ttcttcttcaggccacc 211
            |||||||| ||||||||
Sbjct: 956  ttcttcttaaggccacc 940
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>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT2G01250 mRNA, complete cds
          Length = 1051

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 780 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 721

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 720 ttgaggccacc 710
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>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250)
           mRNA, complete cds
          Length = 760

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 704 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 645

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 644 ttgaggccacc 634
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>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250)
           mRNA, complete cds
          Length = 960

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 753 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 694

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 693 ttgaggccacc 683
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>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete
             sequence
          Length = 94029

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 141   ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
             |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 42564 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 42623

                        
Query: 201   ttcaggccacc 211
             || ||||||||
Sbjct: 42624 ttgaggccacc 42634
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>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA,
           complete cds
          Length = 751

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 704 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 645

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 644 ttgaggccacc 634
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>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13)
           mRNA, complete cds
          Length = 915

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 751 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 692

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 691 ttgaggccacc 681
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>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 889

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 739 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 680

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 679 ttgaggccacc 669
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>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence
          Length = 996

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 200
           |||||| ||||||||||||| || || |||||||| || |||||||| || |||||||||
Sbjct: 780 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 721

                      
Query: 201 ttcaggccacc 211
           || ||||||||
Sbjct: 720 ttgaggccacc 710
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>gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 955

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 135 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 194
           |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||| ||| |||
Sbjct: 785 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagttgtttctc 726

                            
Query: 195 ttcttcttcaggccacc 211
           |||||||| ||||||||
Sbjct: 725 ttcttcttaaggccacc 709
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>emb|BX825608.1|CNS0A7J7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL48ZB10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 350

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 129 ctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtgg 188
           |||||||||| ||||||| |||| || ||||| ||||| || || || || ||||| |||
Sbjct: 170 ctaacgagctcgttgatgaagttgtcgcggtttccagcatctcctccttccacgtaatgg 111

                           
Query: 189 ttcctcttcttcttca 204
           ||||||||||||||||
Sbjct: 110 ttcctcttcttcttca 95
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>ref|XM_741482.1| Aspergillus fumigatus Af293 60S ribosomal protein L7 (Afu4g03880)
           partial mRNA
          Length = 894

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 152 ctcacggttaccagcgtcaccaccctcgacgtagtg 187
           |||||||||||||| |||||||||||||| ||||||
Sbjct: 858 ctcacggttaccagtgtcaccaccctcgatgtagtg 823
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>gb|AY440507.1| Armigeres subalbatus ASAP ID: 40391 cytosolic large ribosomal
           subunit L7 mRNA sequence
          Length = 632

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 150 ttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 199
           ||||| ||||||||   |||||||||||||||||| |||||  |||||||
Sbjct: 489 ttctcgcggttaccraagtcaccaccctcgacgtaatggttgttcttctt 440
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 158     gttaccagcgtcaccaccctcgacgtag 185
               ||||||||||||||||||||| ||||||
Sbjct: 1728159 gttaccagcgtcaccaccctcaacgtag 1728132
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>ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein
           l7 (CNA06360) partial mRNA
          Length = 937

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 158 gttaccagcgtcaccaccctcgacgtag 185
           ||||||||||||||||||||| ||||||
Sbjct: 735 gttaccagcgtcaccaccctcaacgtag 708
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>gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribosomal protein L7
           (At2g44120) mRNA, complete cds
          Length = 915

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                       
Query: 117 tagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccc 176
           ||||||||||| || | |||||  |||||| | ||||| || || ||||| |||||||| 
Sbjct: 774 tagttcatcctcctgatgagctcattgatgaaattctcgcgatttccagcatcaccacct 715

                                  
Query: 177 tcgacgtagtggttcctcttctt 199
           || || |||||||| ||||||||
Sbjct: 714 tcaacatagtggtttctcttctt 692
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>ref|XM_779123.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal
           protein L7 (LOC578988), mRNA
          Length = 300

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 167 gtcaccaccctcgacgtagtggttcctcttctt 199
           |||||||||||||||| ||||||| | ||||||
Sbjct: 249 gtcaccaccctcgacgaagtggttgcccttctt 217
to top
>gb|AY433771.1| Aedes aegypti ASAP ID: 34421 cytosolic large ribosomal subunit L7
           mRNA sequence
          Length = 453

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 152 ctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 199
           ||||||||||||   |||||| ||||||||||| |||||  |||||||
Sbjct: 322 ctcacggttaccgaagtcaccgccctcgacgtaatggttgttcttctt 275
to top
>gb|DQ440213.1| Aedes aegypti clone AET-2196 ribosomal protein L7 mRNA, complete
           cds
          Length = 792

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 152 ctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 199
           ||||||||||||   |||||| ||||||||||| |||||  |||||||
Sbjct: 756 ctcacggttaccgaagtcaccgccctcgacgtaatggttgttcttctt 709
to top
>ref|XM_659619.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7107.2), mRNA
          Length = 750

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 152 ctcacggttaccagcgtcaccaccctcgacgtagtg 187
           |||||||||||||| |||||| |||| || ||||||
Sbjct: 714 ctcacggttaccagtgtcaccgccctggatgtagtg 679
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>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete
            sequence
          Length = 203180

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 183  tagtggttcctcttcttcttcagg 206
            ||||||||||||| ||||||||||
Sbjct: 1172 tagtggttcctctgcttcttcagg 1195
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>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete
             sequence
          Length = 221980

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 183   tagtggttcctcttcttcttcagg 206
             ||||||||||||| ||||||||||
Sbjct: 93291 tagtggttcctctgcttcttcagg 93314
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>ref|XM_386034.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05858.1)
            partial mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  gatgtagttctcacggttac 162
            ||||||||||||||||||||
Sbjct: 1053 gatgtagttctcacggttac 1034
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>emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M19 on chromosome Xp11.22-11.3
              Contains the 5' end of the KLF8 gene for Kruppel-like
              factor 8 and a ribosomal protein L23a (RPL23A) pseudogene,
              complete sequence
          Length = 177483

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ccaacacagggtattatcaa 101
              ||||||||||||||||||||
Sbjct: 133897 ccaacacagggtattatcaa 133878
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>gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111104

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    ccttccaacacagggtattatcaa 101
             ||||||| ||||||||||||||||
Sbjct: 47826 ccttccagcacagggtattatcaa 47849
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>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete sequence
          Length = 162175

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 183    tagtggttcctcttcttcttcagg 206
              ||||||||||||| ||||||||||
Sbjct: 156445 tagtggttcctctgcttcttcagg 156468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,312,592
Number of Sequences: 3902068
Number of extensions: 2312592
Number of successful extensions: 143558
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143336
Number of HSP's gapped (non-prelim): 222
length of query: 211
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 189
effective length of database: 17,147,199,772
effective search space: 3240820756908
effective search space used: 3240820756908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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