>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 9)
           (ATP-energized glutathione S-conjugate pump 9)
          Length = 1490

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -1

Query: 475 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 359
           I  YLQQSET KDA+E C K+   L  E+EN +   EPE++
Sbjct: 604 IASYLQQSETQKDAVEYCSKDHTELSVEIENGAFSWEPESS 644

>MRP15_ARATH (Q7FB56) Putative multidrug resistance-associated protein 15 (EC|
           3.6.3.44) (Glutathione S-conjugate transporting ATPase
           15) (ATP-energized glutathione S-conjugate pump 15)
          Length = 1037

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -1

Query: 475 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 359
           I  YLQQSET KDA+E C  +      E+EN +   EPE++
Sbjct: 188 IASYLQQSETQKDAVEYCSNDHTEFSVEIENGAFSWEPESS 228

>PEPL_HUMAN (O60437) Periplakin (195 kDa cornified envelope precursor protein)|
           (190 kDa paraneoplastic pemphigus antigen)
          Length = 1756

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -1

Query: 463 LQQSETTKDAMERCKEVISLETEVENSSIVEPETAASSATLESFWDVVPGASSRVWAGPS 284
           L+Q    +D+ ER K++ ++  E+     +EPE   S+A  E+F   +PG+ +       
Sbjct: 533 LEQGRAVQDSAERAKDLKNITNELLR---IEPEKTRSTAEGEAFIQALPGSGTTPLLRTQ 589

Query: 283 LEDGRPK 263
           +ED   K
Sbjct: 590 VEDTNRK 596

>SPR2_CAEEL (Q18240) Suppressor of presenilin 2|
          Length = 312

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
 Frame = -1

Query: 685 AISDLKVDIIASLRSRLDIILDEADDDSTTNDV--------ENSPSQKVTQVNFHELREP 530
           A+ DL+V     LRS   II+    ++  TN+V          SPS ++T++ + E ++P
Sbjct: 105 ALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEWKENKKP 164

Query: 529 YSFSFPR-----RILIPWLAGSYICDYLQQSETTKD 437
               FP         + WL  + + D  + +E  KD
Sbjct: 165 ---PFPEDGDSAHTFLEWLTYAALPDSDEIAEVIKD 197

>PSY_CAPAN (P37272) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)|
          Length = 419

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -3

Query: 398 RSGELLHC*TRNRSI*CDTRIILGCGA--WSFLTCVGGAQSGRWAP*TGDVFRESTGQRF 225
           R G  +   +  R++ C+ RI  G G   WSF + +GGAQ+G             +G++F
Sbjct: 25  REGNRIFDSSGRRNLACNERIKRGGGKQRWSFGSYLGGAQTG-------------SGRKF 71

Query: 224 QHPSCLVCAPGGSST 180
              S +V  P G  T
Sbjct: 72  SVRSAIVATPAGEMT 86

>L_CDVO (P24658) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2184

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 224  QHPSCLVCAPGGSS-TWIYVRVPCQLENLRVILAMFCVSYI 105
            +H SCL+CA G  +  W ++   CQL+++    +   V YI
Sbjct: 1173 RHESCLLCASGSHNYGWFFIPANCQLDSITEGTSALRVPYI 1213

>KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion protein)|
          Length = 729

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 22/77 (28%), Positives = 35/77 (45%)
 Frame = +3

Query: 51  HCERNSTLFTSRVKRFGQNVRYTKHSKNYSQVFELAGNANINPSRRATRSTNKAARMLKP 230
           H  R+ ++F   +   G N +   HS     + +LAG+  IN S+       +   + K 
Sbjct: 595 HSSRSHSIFIIHLS--GSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKS 652

Query: 231 LPCALPEHITCLGRPSS 281
           L C L + I  LG+P S
Sbjct: 653 LSC-LGDVIHALGQPDS 668

>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 226

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -1

Query: 457 QSETTKDAMERCKEV---ISLETEVENSSIVEPETAASSATLE 338
           Q+   K+A E+ KE+      E E+E +SIV  ETAA  +T E
Sbjct: 16  QAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYE 58

>M3K1_RAT (Q62925) Mitogen-activated protein kinase kinase kinase 1 (EC|
            2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
            (MEKK 1)
          Length = 1493

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 394  LLFPVISLPC-SAPLRPSLSLIVASSHKYRS 483
            L+FP IS PC SAP  P+ S+  AS H+ R+
Sbjct: 959  LMFPAISAPCSSAPSVPAGSVTDASKHRPRA 989

>PRA10_HUMAN (O60809) PRAME family member 10 (Fragment)|
          Length = 459

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
 Frame = +2

Query: 14  GXVHVCAA-------PTNC--SL*KKLYTFHLQS*EVWTKCKIHKT 124
           G VH+C +       PT+   +L +++Y   +Q  EVW KC ++KT
Sbjct: 176 GLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKT 221

>UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein|
           (tRNA(Ser)Sec-associated antigenic protein) (SLA/LP
           autoantigen) (Soluble liver antigen) (SLA)
           (Liver-pancreas antigen) (LP) (SLA-p35)
          Length = 501

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 218 PSCLVCAPGGSSTWIYVRVPCQLENLRVILAMFCVSYILSKPLNSGGEKC 69
           P C++C    +S +   RVP +LE L VI A + + +I++        KC
Sbjct: 214 PDCILCIHSTTSCFA-PRVPDRLEELAVICANYDIPHIVNNAYGVQSSKC 262

>TRPA_HALSA (Q9HSB9) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 276

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 228 PLPCALPEHITCL---GRPSSRLGPAHTREEAPGTTSQNDSSVALDAAVSGSTMEEFSTS 398
           P P A  E+I  L   G     LG   +   A GTT QN    ALDA ++     +    
Sbjct: 25  PTPAATAEYIDALVDGGTDVIELGLPFSEPVAEGTTIQNAIKRALDAGMTPDAYLDLVAR 84

Query: 399 VSSDI 413
           + +D+
Sbjct: 85  IDADV 89

>PSBC_CHLEU (Q08684) Photosystem II 44 kDa reaction center protein (P6 protein)|
           (CP43)
          Length = 461

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = -3

Query: 338 IILGCGAWSFL--TCVGGAQSGRWAP*TGDV--FRESTGQRFQHPSCLVCAPGGSSTWIY 171
           I+LGCGAW  +      G     WAP  GDV      T         L+ +P G   WI 
Sbjct: 154 IMLGCGAWLLVLKAMYFGGIYDTWAPGGGDVRIITNPTTNFATIFGYLLRSPFGGDGWI- 212

Query: 170 VRVPCQLENLRVIL 129
               C ++NL  I+
Sbjct: 213 ----CSVDNLEDII 222


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,379,625
Number of Sequences: 219361
Number of extensions: 1992466
Number of successful extensions: 5669
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5654
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)