ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28m05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC147640.3| Mus musculus BAC clone RP23-131P20 from chromosome 10, complete sequence Length = 217527 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcccccaa 209 |||||||| ||||||||| |||||||||||| Sbjct: 84270 tcctcctcagcttcttccacctttcccccaa 84300
>gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149929 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcct 200 |||||||||||||||||||||| Sbjct: 107370 tcctcctctgcttcttcctcct 107391
>emb|CR450697.3| Zebrafish DNA sequence from clone CH211-284F22 in linkage group 5, complete sequence Length = 143752 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 tgcaaaaacaaccttgtgattt 159 |||||||||||||||||||||| Sbjct: 7327 tgcaaaaacaaccttgtgattt 7306
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcct 200 |||||||||||||||||||||| Sbjct: 44751 tcctcctctgcttcttcctcct 44772 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 44713 tcctcctctgcttcttcctc 44732
>dbj|AK037681.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130036O06 product:unclassifiable, full insert sequence Length = 2376 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcct 200 |||||||||||||||||||||| Sbjct: 352 tcctcctctgcttcttcctcct 373 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 314 tcctcctctgcttcttcctc 333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 cttatactcccttcgtccgaaaaaga 108 |||||||||||| ||||||||||||| Sbjct: 27619599 cttatactccctccgtccgaaaaaga 27619624 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cctcctctgcttcttcctcctttc 203 |||||||| ||||||||||||||| Sbjct: 23417660 cctcctcttcttcttcctcctttc 23417683 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 2679652 tcctcctctgcttcttcctc 2679671
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 cttatactcccttcgtccgaaaaaga 108 |||||||||||| ||||||||||||| Sbjct: 76592 cttatactccctccgtccgaaaaaga 76617
>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence Length = 163698 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 182 tcctctgcttcttcctcctttccccc 207 |||||| ||||||||||||||||||| Sbjct: 128571 tcctcttcttcttcctcctttccccc 128596
>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence Length = 187115 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcct 200 |||||||||||||||||||||| Sbjct: 147511 tcctcctctgcttcttcctcct 147532 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 147473 tcctcctctgcttcttcctc 147492
>gb|U19361.1|PMU19361 Petromyzon marinus neurofilament subunit NF-180 mRNA, complete cds Length = 3763 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcct 200 |||||||||||||||||||||| Sbjct: 2388 tcctcctctgcttcttcctcct 2367
>emb|AL606509.6| Mouse DNA sequence from clone RP23-415B9 on chromosome 11, complete sequence Length = 197852 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcc 204 |||||||||||||| ||||||||||| Sbjct: 36786 tcctcctctgcttcctcctcctttcc 36811 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcc 204 |||||||||||||| ||||||||||| Sbjct: 36763 tcctcctctgcttcctcctcctttcc 36788 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 cctcctctgcttcttcctcctttcc 204 ||||||||||||| ||||||||||| Sbjct: 36741 cctcctctgcttcctcctcctttcc 36765
>gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, complete sequence Length = 253153 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttc 203 ||||||||| ||||||||||||||| Sbjct: 148884 tcctcctcttcttcttcctcctttc 148908
>ref|XM_475071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 taactgcttgttattgtcttgaacacttcctga 421 |||||||||||||||||| ||||| ||||||| Sbjct: 182 taactgcttgttattgtcctgaacctttcctga 150
>gb|AC137104.11| Mus musculus chromosome 1, clone RP23-241K20, complete sequence Length = 171622 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttccccc 207 ||||||||| ||| ||||||||||||||| Sbjct: 13632 tcctcctcttcttattcctcctttccccc 13604 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 13515 tcctcctcttcttcttcctccttt 13492
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 taactgcttgttattgtcttgaacacttcctga 421 |||||||||||||||||| ||||| ||||||| Sbjct: 33298 taactgcttgttattgtcctgaacctttcctga 33330
>gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, complete sequence Length = 149487 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttccccc 207 ||||||||| ||| ||||||||||||||| Sbjct: 119672 tcctcctcttcttattcctcctttccccc 119644 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 119555 tcctcctcttcttcttcctccttt 119532
>gb|AC163444.3| Mus musculus chromosome 1, clone RP23-85E22, complete sequence Length = 225533 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 atcctcctctgcttcttcctcctttcccc 206 ||||||||||||||||||| |||||||| Sbjct: 13345 atcctcctctgcttcttccagctttcccc 13317
>gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, complete sequence Length = 196086 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttc 203 ||||||||| ||||||||||||||| Sbjct: 131409 tcctcctcttcttcttcctcctttc 131385
>emb|AL451005.9| Human DNA sequence from clone RP11-92B10 on chromosome X Contains the 5' end of a variant of the CUL4B gene for cullin 4B and the 5' end of a variant of the gene for MCT-1 protein (MCT-1), complete sequence Length = 26768 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cttcttcctcctttcccccaa 209 ||||||||||||||||||||| Sbjct: 12231 cttcttcctcctttcccccaa 12211
>ref|NM_001016776.2| Xenopus tropicalis DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 (ddx18), mRNA Length = 2122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcc 199 ||||||||||||||||||||| Sbjct: 470 tcctcctctgcttcttcctcc 450
>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 atttgttgttttgcaaaaaca 147 ||||||||||||||||||||| Sbjct: 86962 atttgttgttttgcaaaaaca 86942
>ref|NM_168754.1| Drosophila melanogaster Tetraspanin 74F CG5492-RA, transcript variant A (Tsp74F), mRNA Length = 1409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 atttgttgttttgcaaaaaca 147 ||||||||||||||||||||| Sbjct: 178 atttgttgttttgcaaaaaca 158
>ref|NM_079408.4| Drosophila melanogaster Tetraspanin 74F CG5492-RB, transcript variant B (Tsp74F), mRNA Length = 1514 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 atttgttgttttgcaaaaaca 147 ||||||||||||||||||||| Sbjct: 178 atttgttgttttgcaaaaaca 158
>gb|AC119156.9| Mus musculus chromosome 1, clone RP24-534J20, complete sequence Length = 185873 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttc 203 ||||||||| ||||||||||||||| Sbjct: 184917 tcctcctcttcttcttcctcctttc 184941
>dbj|AK159159.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420006A11 product:hypothetical Bipartite nuclear localization signal containing protein, full insert sequence Length = 1500 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttc 203 ||||||||| ||||||||||||||| Sbjct: 1110 tcctcctcttcttcttcctcctttc 1086
>gb|AY071260.1| Drosophila melanogaster RE29825 full length cDNA Length = 1422 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 atttgttgttttgcaaaaaca 147 ||||||||||||||||||||| Sbjct: 178 atttgttgttttgcaaaaaca 158
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 taactgcttgttattgtcttgaacacttcctga 421 |||||||||||||||||| ||||| ||||||| Sbjct: 257778 taactgcttgttattgtcctgaacctttcctga 257810 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ctcctctgcttcttcctcct 200 |||||||||||||||||||| Sbjct: 26923000 ctcctctgcttcttcctcct 26923019 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 aatacttatactcccttcgtccgaaaaa 106 |||||||||||||||| ||||| ||||| Sbjct: 25106459 aatacttatactccctccgtccaaaaaa 25106432 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 19187209 tcctcctctgcttcttcctc 19187190 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 attctggtgctagagtttgg 267 |||||||||||||||||||| Sbjct: 16122539 attctggtgctagagtttgg 16122520
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence Length = 155011 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttc 203 ||||||||| ||||||||||||||| Sbjct: 24388 tcctcctcttcttcttcctcctttc 24364
>gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, complete sequence Length = 175974 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcctcctctgcttcttcctcctttcccc 206 ||||||||||||||||||| |||||||| Sbjct: 48820 atcctcctctgcttcttccagctttcccc 48848
>emb|CR848749.13| Zebrafish DNA sequence from clone CH211-147F13 in linkage group 15, complete sequence Length = 161648 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcc 199 ||||||||||||||||||||| Sbjct: 48596 tcctcctctgcttcttcctcc 48576
>emb|CR855719.2| Xenopus tropicalis finished cDNA, clone TGas108f21 Length = 2122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcc 199 ||||||||||||||||||||| Sbjct: 470 tcctcctctgcttcttcctcc 450
>gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63 of 83 of the complete sequence Length = 302050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 atttgttgttttgcaaaaaca 147 ||||||||||||||||||||| Sbjct: 117496 atttgttgttttgcaaaaaca 117516
>emb|CT027991.8| Mouse DNA sequence from clone RP23-418N2 on chromosome 16, complete sequence Length = 186296 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cctcctctgcttcttcctcct 200 ||||||||||||||||||||| Sbjct: 135772 cctcctctgcttcttcctcct 135752
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 172 taatcaatcctcctctgcttcttcctcct 200 |||||||| ||||||| |||||||||||| Sbjct: 135440 taatcaattctcctcttcttcttcctcct 135468
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tcctctgcttcttcctccttt 202 ||||||||||||||||||||| Sbjct: 239022 tcctctgcttcttcctccttt 239002
>gb|AC156543.10| Mus musculus chromosome 15, clone RP23-220F2, complete sequence Length = 199715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tcctctgcttcttcctccttt 202 ||||||||||||||||||||| Sbjct: 18457 tcctctgcttcttcctccttt 18437
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 taactgcttgttattgtcttgaacacttcctga 421 |||||||||||||||||| ||||| ||||||| Sbjct: 139962 taactgcttgttattgtcctgaacctttcctga 139994
>ref|NM_128900.2| Arabidopsis thaliana unknown protein AT2G33400 mRNA, complete cds Length = 1573 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgcttcttcctcctttcccc 206 |||||||||||||||||||| Sbjct: 466 tgcttcttcctcctttcccc 447
>gb|AY773858.1| Arabidopsis thaliana clone pENTR221-At2g33400 hypothetical protein (At2g33400) mRNA, complete cds Length = 819 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgcttcttcctcctttcccc 206 |||||||||||||||||||| Sbjct: 337 tgcttcttcctcctttcccc 318
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 168359 tcctcctctgcttcttcctc 168378
>ref|XM_636540.1| Dictyostelium discoideum hypothetical protein (DDB0205771), partial mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ctgctaatcaatcctcctctgctt 191 ||||||||| |||||||||||||| Sbjct: 2080 ctgctaatctatcctcctctgctt 2057
>ref|XM_476651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 276 tcctcctctgcttcttcctc 257
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 attctggtgctagagtttgg 267 |||||||||||||||||||| Sbjct: 73709 attctggtgctagagtttgg 73690
>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial sequence; SBE I pseudogene, complete sequence; and starch branching enzyme I (SBE I) gene, complete cds Length = 25187 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cttatactcccttcgtccgaaaaa 106 |||||||||||| ||||||||||| Sbjct: 4235 cttatactccctccgtccgaaaaa 4258
>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence Length = 195159 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 acagagcaccatggccccaa 321 |||||||||||||||||||| Sbjct: 131956 acagagcaccatggccccaa 131975
>ref|XM_614399.2| PREDICTED: Bos taurus similar to Nuclear factor erythroid 2 related factor 1 (NF-E2 related factor 1) (NFE2-related factor 1) (Nuclear factor, erythroid derived 2, like 1) (Transcription factor 11) (Transcription factor HBZ17) (Transcription factor LCR-F1) (Locus contro... (LOC534582), mRNA Length = 2746 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 1713 tcctcctctgcttcttcctc 1732
>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence Length = 228427 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 tcctctgcttcttcctcctt 201 |||||||||||||||||||| Sbjct: 164105 tcctctgcttcttcctcctt 164124
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ctcctctgcttcttcctcct 200 |||||||||||||||||||| Sbjct: 75432 ctcctctgcttcttcctcct 75451
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 aatacttatactcccttcgtccgaaaaa 106 |||||||||||||||| ||||| ||||| Sbjct: 49114 aatacttatactccctccgtccaaaaaa 49087
>gb|AC158316.3| Mus musculus chromosome 8, clone RP23-189N8, complete sequence Length = 183192 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 11261 tcctcctcttcttcttcctccttt 11238
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 109107 tcctcctctgcttcttcctc 109088
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactcccttcgtccgaaaaagaat 110 |||||||||||||| ||||||||| Sbjct: 5654074 tactcccttcgtcccaaaaagaat 5654097
>ref|XM_987460.1| PREDICTED: Mus musculus procollagen, type VI, alpha 2, transcript variant 3 (Col6a2), mRNA Length = 4960 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcccc 206 |||||||| |||||||||||||||||| Sbjct: 3653 tcctcctcctcttcttcctcctttcccc 3680
>gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome 8, complete sequence Length = 218715 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||| ||||||||||||||| Sbjct: 130464 tcctcctcagcttcttcctccttt 130487
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence Length = 169094 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 112749 tcctcctctgcttcttcctc 112730
>gb|DQ483802.1| Gymnogyps californianus clone 225F microsatellite sequence Length = 587 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||| ||||||||||| Sbjct: 286 tcctcctctgctgcttcctccttt 263
>gb|DQ483488.1| Gymnogyps californianus clone 47D microsatellite sequence Length = 599 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||| ||||||||||| Sbjct: 286 tcctcctctgctgcttcctccttt 263
>gb|DQ484011.1| Gymnogyps californianus clone 177G microsatellite sequence Length = 587 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||| ||||||||||| Sbjct: 302 tcctcctctgctgcttcctccttt 325
>gb|DQ483423.1| Gymnogyps californianus clone 126H microsatellite sequence Length = 587 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||| ||||||||||| Sbjct: 286 tcctcctctgctgcttcctccttt 263
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 atactcccttcgtccgaaaa 105 |||||||||||||||||||| Sbjct: 8797 atactcccttcgtccgaaaa 8816
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 atactcccttcgtccgaaaa 105 |||||||||||||||||||| Sbjct: 11511 atactcccttcgtccgaaaa 11530
>gb|AY144106.1| Arabidopsis thaliana hypothetical protein (At2g33400/F4P9.17) mRNA, complete cds Length = 1225 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgcttcttcctcctttcccc 206 |||||||||||||||||||| Sbjct: 466 tgcttcttcctcctttcccc 447
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||||| ||||||||| Sbjct: 171941 tcctcctctgcttcctcctccttt 171918
>gb|AC079938.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-201C9, complete sequence Length = 143322 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 75806 tcctcctcttcttcttcctccttt 75783
>gb|AC107701.8| Mus musculus chromosome 3, clone RP23-49O22, complete sequence Length = 241986 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 108002 ttagttcatttgttgttttg 108021
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 156751 tcctcctctgcttcttcctc 156770
>gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200439 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 3246 tcctcctctgcttcttcctc 3265
>emb|CR524825.5| Zebrafish DNA sequence from clone CH211-15N24 in linkage group 16, complete sequence Length = 134382 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 atcctcctctgcttcttcctcctt 201 |||||||||| ||||||||||||| Sbjct: 112415 atcctcctcttcttcttcctcctt 112392
>emb|AL356313.15| Human DNA sequence from clone RP11-531P20 on chromosome 13 Contains a novel gene, complete sequence Length = 143957 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccacttcaaagaaaagtg 360 |||||||||||||||||||| Sbjct: 51461 cgccacttcaaagaaaagtg 51480
>emb|AL161908.13| Human DNA sequence from clone RP11-123K19 on chromosome 9 Contains two novel genes, the 5' end of the LMX1B gene for LIM homeobox transcription factor 1 beta and two CpG islands, complete sequence Length = 106216 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctccttccccgccaccgccc 247 |||||||||||||||||||| Sbjct: 65595 ctccttccccgccaccgccc 65614
>emb|AL078460.6|HSDJ341O5 Human DNA sequence from clone RP3-341O5 on chromosome 22, complete sequence Length = 35213 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tgtgatttaaaatcccctgc 171 |||||||||||||||||||| Sbjct: 1767 tgtgatttaaaatcccctgc 1748
>emb|AL022168.1|HSU247E12 Human DNA sequence from clone LL0XNC01-247E12 on chromosome Xq22-23, complete sequence Length = 15542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aaaacaaccttgtgatttaa 161 |||||||||||||||||||| Sbjct: 143 aaaacaaccttgtgatttaa 124
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 54122 tcctcctcttcttcttcctccttt 54099
>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence Length = 215871 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 18695 ttagttcatttgttgttttg 18676
>emb|AJ271055.1|MMU271055 Mus musculus mRNA for iroquois homeobox protein 6 (Irx6 gene) Length = 1750 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 810 tcctcctctgcttcttcctc 791
>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25, complete sequence Length = 225139 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 gcactcccccttatcagggc 522 |||||||||||||||||||| Sbjct: 168643 gcactcccccttatcagggc 168662
>gb|BC097166.1| Danio rerio Smad nuclear interacting protein, mRNA (cDNA clone MGC:114106 IMAGE:7448981), complete cds Length = 1792 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 atcctcctctgcttcttcctcctt 201 |||||||||| ||||||||||||| Sbjct: 1179 atcctcctcttcttcttcctcctt 1156
>ref|NM_001025470.1| Danio rerio Smad nuclear interacting protein (snip1), mRNA Length = 1792 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 atcctcctctgcttcttcctcctt 201 |||||||||| ||||||||||||| Sbjct: 1179 atcctcctcttcttcttcctcctt 1156
>gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosome 16, complete sequence Length = 196765 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 193134 ttagttcatttgttgttttg 193115
>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25, complete sequence Length = 176023 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gcactcccccttatcagggc 522 |||||||||||||||||||| Sbjct: 62484 gcactcccccttatcagggc 62465
>gb|AC104330.2| Homo sapiens chromosome 3 clone RP11-522N9, complete sequence Length = 178219 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 actgctccttccccgccacc 243 |||||||||||||||||||| Sbjct: 112610 actgctccttccccgccacc 112591
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgcttcttcctcctttcccc 206 |||||||||||||||||||| Sbjct: 57669 tgcttcttcctcctttcccc 57688
>dbj|AK132540.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831408D02 product:procollagen, type VI, alpha 2, full insert sequence Length = 4404 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcccc 206 |||||||| |||||||||||||||||| Sbjct: 3350 tcctcctcctcttcttcctcctttcccc 3377
>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence Length = 186076 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gccacttcaaagaaaagtga 361 |||||||||||||||||||| Sbjct: 95305 gccacttcaaagaaaagtga 95324
>gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, complete sequence Length = 205015 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctcctttcccc 206 |||||||| |||||||||||||||||| Sbjct: 6051 tcctcctcctcttcttcctcctttcccc 6078
>gb|AC008615.8| Homo sapiens chromosome 5 clone CTB-144A14, complete sequence Length = 115306 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaaacaaccttgtgatttaa 161 |||||||||||||||||||| Sbjct: 33102 aaaacaaccttgtgatttaa 33121
>emb|BX649265.5| Zebrafish DNA sequence from clone CH211-134G22 in linkage group 16, complete sequence Length = 178901 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 atcctcctctgcttcttcctcctt 201 |||||||||| ||||||||||||| Sbjct: 86520 atcctcctcttcttcttcctcctt 86497
>gb|S65875.1|S65874S2 Mus musculus Ftzf1 gene, partial sequence Length = 900 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 agggctgcttcctcgccgcc 344 |||||||||||||||||||| Sbjct: 302 agggctgcttcctcgccgcc 283
>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence Length = 243976 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 25005 tcctcctcttcttcttcctccttt 24982
>gb|AC156832.2| Mus musculus BAC clone RP24-212B22 from chromosome 9, complete sequence Length = 181683 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 109394 tcctcctcttcttcttcctccttt 109417
>gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosome 13, complete sequence Length = 150809 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 89936 tcctcctcttcttcttcctccttt 89913
>gb|BC036969.1| Mus musculus Iroquois related homeobox 6 (Drosophila), mRNA (cDNA clone IMAGE:4512181), partial cds Length = 1041 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 140 tcctcctctgcttcttcctc 121
>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence Length = 202543 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ctcctctgcttcttcctcct 200 |||||||||||||||||||| Sbjct: 41563 ctcctctgcttcttcctcct 41544
>dbj|AK035140.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430093B05 product:iroquois related homeobox 6 (Drosophila), full insert sequence Length = 3373 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 1549 tcctcctctgcttcttcctc 1530
>dbj|AK053729.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303E11 product:iroquois related homeobox 6 (Drosophila), full insert sequence Length = 2382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 1434 tcctcctctgcttcttcctc 1415
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 198438 ttagttcatttgttgttttg 198457
>gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197426 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctcctttcccc 206 |||||||| |||||||||||||||||| Sbjct: 113707 tcctcctcctcttcttcctcctttcccc 113680
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactcccttcgtccgaaaaagaat 110 |||||||||||||| ||||||||| Sbjct: 5653287 tactcccttcgtcccaaaaagaat 5653310
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgatttatcatacaaccagaggca 569 ||||||||||| |||||||||||| Sbjct: 14284902 tgatttatcattcaaccagaggca 14284925
>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence Length = 172850 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 aaagaaaagtgattccatgaactc 373 ||||||| |||||||||||||||| Sbjct: 127608 aaagaaaggtgattccatgaactc 127585
>dbj|AB221658.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01Y041C19 Length = 1315 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 798 tcctcctctgcttcttcctc 779
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactcccttcgtccgaaaaagaat 110 |||||||||||||| ||||||||| Sbjct: 117773 tactcccttcgtcccaaaaagaat 117796
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence Length = 167400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aaaacaaccttgtgatttaa 161 |||||||||||||||||||| Sbjct: 43273 aaaacaaccttgtgatttaa 43254
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cctcctctgcttcttcctcctttc 203 |||||||| ||||||||||||||| Sbjct: 98884 cctcctcttcttcttcctcctttc 98907
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 105370 tcctcctctgcttcttcctc 105389
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgatttatcatacaaccagaggca 569 ||||||||||| |||||||||||| Sbjct: 36179 tgatttatcattcaaccagaggca 36202
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458A05 Length = 120593 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgatttatcatacaaccagaggca 569 ||||||||||| |||||||||||| Sbjct: 80592 tgatttatcattcaaccagaggca 80615
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cctcctctgcttcttcctcctttc 203 |||||||| ||||||||||||||| Sbjct: 37557 cctcctcttcttcttcctcctttc 37580
>emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on chromosome 2, complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 agggctgcttcctcgccgcc 344 |||||||||||||||||||| Sbjct: 118530 agggctgcttcctcgccgcc 118549
>dbj|AK102482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094L12, full insert sequence Length = 2770 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 attctggtgctagagtttgg 267 |||||||||||||||||||| Sbjct: 1611 attctggtgctagagtttgg 1630
>gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, complete sequence Length = 179257 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 28794 ttagttcatttgttgttttg 28775
>dbj|AK073748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066L16, full insert sequence Length = 3317 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 attctggtgctagagtttgg 267 |||||||||||||||||||| Sbjct: 1612 attctggtgctagagtttgg 1631
>dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066C05, full insert sequence Length = 1104 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 32 tcctcctctgcttcttcctc 51
>dbj|AK069726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M13, full insert sequence Length = 1894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 275 tcctcctctgcttcttcctc 256
>dbj|AK066003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E21, full insert sequence Length = 2279 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 32 tcctcctctgcttcttcctc 51
>emb|BX649299.5| Zebrafish DNA sequence from clone CH211-209E14 in linkage group 20, complete sequence Length = 199740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ttgcaaaaacaaccttgtga 156 |||||||||||||||||||| Sbjct: 115133 ttgcaaaaacaaccttgtga 115152
>dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B09, full insert sequence Length = 603 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 31 tcctcctctgcttcttcctc 50
>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence Length = 242383 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cttcaaagaaaagtgattcc 365 |||||||||||||||||||| Sbjct: 183367 cttcaaagaaaagtgattcc 183386
>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence Length = 193105 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 101858 tcctcctcttcttcttcctccttt 101835
>gb|AC157478.3| Mus musculus BAC clone RP23-33K19 from chromosome 15, complete sequence Length = 229783 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 67155 ttagttcatttgttgttttg 67136
>gb|AF059572.1|HSLMX1B1 Homo sapiens LIM homeodomain protein (LMX1B) gene, exons 1 and 2 Length = 1348 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctccttccccgccaccgccc 247 |||||||||||||||||||| Sbjct: 1088 ctccttccccgccaccgccc 1107
>emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chromosome 13, complete sequence Length = 209356 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctccttt 202 ||||||||| |||||||||||||| Sbjct: 141771 tcctcctcttcttcttcctccttt 141794
>ref|NM_022428.2| Mus musculus Iroquois related homeobox 6 (Drosophila) (Irx6), mRNA Length = 2380 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 1433 tcctcctctgcttcttcctc 1414
>gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, complete sequence Length = 169201 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 81867 tcctcctctgcttcttcctc 81886
>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete sequence Length = 163813 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcctcctctgcttcttcctccttt 202 |||||||||||||| ||||||||| Sbjct: 67927 tcctcctctgcttcctcctccttt 67904
>gb|AC099643.5| Mus musculus chromosome 7, clone RP24-350G1, complete sequence Length = 139303 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ctcctctgcttcttcctcct 200 |||||||||||||||||||| Sbjct: 24751 ctcctctgcttcttcctcct 24732
>emb|AL929546.8| Mouse DNA sequence from clone RP23-402K10 on chromosome 2, complete sequence Length = 130361 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 52283 ttagttcatttgttgttttg 52302
>emb|AL663073.9| Mouse DNA sequence from clone RP23-197O6 on chromosome X, complete sequence Length = 192304 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcctcctctgcttcttcctc 198 |||||||||||||||||||| Sbjct: 73130 tcctcctctgcttcttcctc 73149
>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete sequence Length = 187066 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttagttcatttgttgttttg 139 |||||||||||||||||||| Sbjct: 63325 ttagttcatttgttgttttg 63306
>emb|AL731700.12| Mouse DNA sequence from clone RP23-239G1 on chromosome 2, complete sequence Length = 187667 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aaatcccctgctaatcaatc 180 |||||||||||||||||||| Sbjct: 106614 aaatcccctgctaatcaatc 106595
>dbj|D10584.1|MUSELP Mus musculus mRNA for embryonal LTR binding protein, complete cds Length = 2068 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 agggctgcttcctcgccgcc 344 |||||||||||||||||||| Sbjct: 265 agggctgcttcctcgccgcc 246
>dbj|AB009576.1| Mus musculus gene for Ad4BP, partial cds Length = 4274 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 agggctgcttcctcgccgcc 344 |||||||||||||||||||| Sbjct: 4006 agggctgcttcctcgccgcc 3987
>dbj|AB023144.2| Homo sapiens mRNA for KIAA0927 protein, partial cds Length = 6301 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tgtgatttaaaatcccctgc 171 |||||||||||||||||||| Sbjct: 4218 tgtgatttaaaatcccctgc 4199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,531,247 Number of Sequences: 3902068 Number of extensions: 5531247 Number of successful extensions: 121396 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120610 Number of HSP's gapped (non-prelim): 786 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
