ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29a24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.... 39 0.005
2COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.... 35 0.040
3COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.... 34 0.090
4Y1151_LACPL (Q88XP4) Hypothetical RNA methyltransferase lp_1151 ... 28 8.4
5ADH1_CAEEL (Q17334) Alcohol dehydrogenase K12G11.3 (EC 1.1.1.1) 28 8.4

>OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol|
           3-O-methyltransferase 1)
          Length = 368

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 223 EFARLAKQAGFTGGIKKTYIFFNFYALEFTK 131
           EF  LA+ AGFTG  K TYI+ N +A+EFTK
Sbjct: 339 EFRELARAAGFTG-FKATYIYANAWAIEFTK 368



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>COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 364

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 223 EFARLAKQAGFTGGIKKTYIFFNFYALEFTK 131
           EF  LAK AGF+G  K TYI+ N +A+EF K
Sbjct: 335 EFRELAKGAGFSG-FKATYIYANAWAIEFIK 364



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>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 362

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 223 EFARLAKQAGFTGGIKKTYIFFNFYALEFTK 131
           EF  LAK AGF+G  K TYI+ N +A+EF K
Sbjct: 333 EFHDLAKGAGFSG-FKATYIYANAWAIEFIK 362



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>Y1151_LACPL (Q88XP4) Hypothetical RNA methyltransferase lp_1151 (EC 2.1.1.-)|
          Length = 457

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 56  LIRDIIRKKKKCSYSGLYHSGT 121
           ++RDI+RK  + +Y   +HSGT
Sbjct: 176 VVRDILRKYHEAAYDEFHHSGT 197



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>ADH1_CAEEL (Q17334) Alcohol dehydrogenase K12G11.3 (EC 1.1.1.1)|
          Length = 349

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 86  KCSYSGLYHSGTWMLLGELKSVKVEEYVGFLDATG 190
           K  YSG+ HS   + LG+LK + V   VG  +  G
Sbjct: 39  KIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAG 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,902,136
Number of Sequences: 219361
Number of extensions: 444177
Number of successful extensions: 992
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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