ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags29a23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds Length = 983 Score = 1154 bits (582), Expect = 0.0 Identities = 610/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 1 gcggtccatggcttttatgatagaaataataaaatgaaaat-ataaatgagcacgtgagc 59 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 966 gcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagc 907 Query: 60 tagcagctcttattcgggacattattcgcnnnnnnnngaagtgctcctattcgggactat 119 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 906 tagcagctcttattcgggacattattcgcaaaaaaa-gaagtgctcctattcgggactat 848 Query: 120 accactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 accactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatg 788 Query: 180 taggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactccttc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 taggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactccttc 728 Query: 240 tccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgca 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 tccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgca 668 Query: 300 tcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatcacc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 tcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatcacc 608 Query: 360 ttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcg 548 Query: 420 ttaagcataagcgtgatccactgcaagagaaccgcatctccagtgggtatactctcatac 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttaagcataagcgtgatccactgcaagagaaccgcatctccagtgggtatactctcatac 488 Query: 480 atatctccagccacatgttcgactcctggaagagggaggccttgggcgatgacatgaggc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 atatctccagccacatgttcgactcctggaagagggaggccttgggcgatgacatgaggc 428 Query: 540 aggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccctagggtggag 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 aggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccctagggtggag 368 Query: 600 ccggtgccaccaccgacgt 618 ||||||||||||||||||| Sbjct: 367 ccggtgccaccaccgacgt 349
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 809 bits (408), Expect = 0.0 Identities = 436/445 (97%), Gaps = 2/445 (0%) Strand = Plus / Minus Query: 1 gcggtccatggcttttatgatagaaataataaaatgaaaat-ataaatgagcacgtgagc 59 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4869 gcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagc 4810 Query: 60 tagcagctcttattcgggacattattcgcnnnnnnnngaagtgctcctattcgggactat 119 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4809 tagcagctcttattcgggacattattcgcaaaaaaa-gaagtgctcctattcgggactat 4751 Query: 120 accactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4750 accactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatg 4691 Query: 180 taggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactccttc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4690 taggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactccttc 4631 Query: 240 tccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgca 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgca 4571 Query: 300 tcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatcacc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4570 tcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatcacc 4511 Query: 360 ttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4510 ttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcg 4451 Query: 420 ttaagcataagcgtgatccactgca 444 ||||||||||||||||||||||||| Sbjct: 4450 ttaagcataagcgtgatccactgca 4426 Score = 228 bits (115), Expect = 2e-56 Identities = 115/115 (100%) Strand = Plus / Minus Query: 504 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591 Query: 564 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgt 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgt 3536 Score = 135 bits (68), Expect = 2e-28 Identities = 68/68 (100%) Strand = Plus / Minus Query: 440 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851 Query: 500 gactcctg 507 |||||||| Sbjct: 3850 gactcctg 3843
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 148 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 207 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665 Query: 208 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 267 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605 Query: 268 gcacaaacatgatgatatccaaggtgaatgcatcccg 304 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 5364272 ccccagggtgga 5364261 Score = 65.9 bits (33), Expect = 1e-07 Identities = 135/169 (79%) Strand = Plus / Minus Query: 139 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 198 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356 Query: 199 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 258 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296 Query: 259 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 307 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 440 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 499 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 5172100 ccccagggtgga 5172089
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 148 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 207 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732 Query: 208 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 267 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672 Query: 268 gcacaaacatgatgatatccaaggtgaatgcatcccg 304 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 36339 ccccagggtgga 36328
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 148 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 207 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654 Query: 208 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 267 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594 Query: 268 gcacaaacatgatgatatccaaggtgaatgcatcccg 304 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 5364261 ccccagggtgga 5364250 Score = 65.9 bits (33), Expect = 1e-07 Identities = 135/169 (79%) Strand = Plus / Minus Query: 139 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 198 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338 Query: 199 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 258 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278 Query: 259 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 307 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 440 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 499 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 5172082 ccccagggtgga 5172071
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 148 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 207 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143 Query: 208 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 267 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203 Query: 268 gcacaaacatgatgatatccaaggtgaatgcatcccg 304 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 101536 ccccagggtgga 101547
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 528 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 587 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618 Query: 588 cctagggtggagccggtgccaccaccgacgt 618 | ||||||| ||||||||| || ||||||| Sbjct: 617 tccagggtggcgccggtgcccccgccgacgt 587
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 528 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 587 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547 Query: 588 cctagggtggagccggtgccaccaccgacgt 618 | ||||||| ||||||||| || ||||||| Sbjct: 103546 tccagggtggcgccggtgcccccgccgacgt 103516
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 528 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 587 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727 Query: 588 cctagggtggagccggtgccaccaccgacgt 618 | ||||||| ||||||||| || ||||||| Sbjct: 307726 tccagggtggcgccggtgcccccgccgacgt 307696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525 Query: 587 ccctagggtggagccggtgccaccaccgacgt 618 | | ||||||| ||||||||| || ||||||| Sbjct: 5127524 ctccagggtggcgccggtgcccccgccgacgt 5127493
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 65.9 bits (33), Expect = 1e-07 Identities = 135/169 (79%) Strand = Plus / Plus Query: 139 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 198 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243 Query: 199 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 258 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303 Query: 259 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 307 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498 Query: 587 ccctagggtgga 598 ||| |||||||| Sbjct: 91499 ccccagggtgga 91510 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 440 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 499 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full insert sequence Length = 1233 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 531 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 590 |||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| | Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625 Query: 591 agggtggagccggtgccaccaccgacgt 618 ||||||| ||||||||| || ||||||| Sbjct: 624 agggtggcgccggtgcccccgccgacgt 597
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688 Query: 587 ccctagggtggagccggtgccaccaccgacgt 618 | | ||||||| ||||||||| || ||||||| Sbjct: 687 ctccagggtggcgccggtgcccccgccgacgt 656
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798 Query: 587 ccctagggtggagccggtgccaccaccgacgt 618 | | ||||||| ||||||||| || ||||||| Sbjct: 103797 ctccagggtggcgccggtgcccccgccgacgt 103766
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714 Query: 587 ccctagggtggagccggtgccaccaccgacgt 618 | | ||||||| ||||||||| || ||||||| Sbjct: 713 ctccagggtggcgccggtgcccccgccgacgt 682
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 527 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 586 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701 Query: 587 ccctagggtggagccggtgccaccaccgacgt 618 | | ||||||| ||||||||| || ||||||| Sbjct: 700 ctccagggtggcgccggtgcccccgccgacgt 669
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene, complete cds Length = 3929 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 528 atgacatgaggcaggtcatagttgatgcc 556 ||||||||||||| ||||||||||||||| Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA, complete cds Length = 1494 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 528 atgacatgaggcaggtcatagttgatgcc 556 ||||||||||||| ||||||||||||||| Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase mRNA, partial cds Length = 1205 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 526 cgatgacatgaggcaggtcatagttgatgcc 556 |||||||||||||||| ||| |||||||||| Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence Length = 208036 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 aataataaaatgaaaatataaatgag 50 ||||||||||| |||||||||||||| Sbjct: 56039 aataataaaattaaaatataaatgag 56064
>gb|AC104629.10| Homo sapiens 3 BAC RP11-12N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158224 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 agaaataataaaatgaaaatataaat 47 ||||||||||||||| |||||||||| Sbjct: 22849 agaaataataaaatgcaaatataaat 22824
>gb|AC007329.7|AC007329 Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone BACR14P04, complete sequence Length = 126140 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ataataaaatgaaaatataaat 47 |||||||||||||||||||||| Sbjct: 83020 ataataaaatgaaaatataaat 83041
>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete sequence Length = 265472 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ataataaaatgaaaatataaat 47 |||||||||||||||||||||| Sbjct: 43030 ataataaaatgaaaatataaat 43051
>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete sequence Length = 179358 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 27 taataaaatgaaaatataaatgagca 52 |||||||||||||| ||||||||||| Sbjct: 96293 taataaaatgaaaaaataaatgagca 96318
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ttttatgatagaaataataaaa 34 |||||||||||||||||||||| Sbjct: 96149 ttttatgatagaaataataaaa 96170
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatataaatg 48 ||||||||||||||||||| ||||| Sbjct: 171644 aaataataaaatgaaaataaaaatg 171620
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 agaaataataaaatgaaaata 42 ||||||||||||||||||||| Sbjct: 130171 agaaataataaaatgaaaata 130151
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence Length = 238262 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 tcatacatatctccagccacatgtt 498 |||||||||| |||||||||||||| Sbjct: 237760 tcatacatatatccagccacatgtt 237784
>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8, complete sequence Length = 153753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ataaaatgaaaatataaatga 49 ||||||||||||||||||||| Sbjct: 56894 ataaaatgaaaatataaatga 56914
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aataaaatgaaaatataaatg 48 ||||||||||||||||||||| Sbjct: 91865 aataaaatgaaaatataaatg 91845 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tagaaataataaaatgaaaa 40 |||||||||||||||||||| Sbjct: 54063 tagaaataataaaatgaaaa 54044
>ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical protein (PB108243.00.0) partial mRNA Length = 634 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 13 ttttatgatagaaataataaaatgaaaat 41 |||||||| ||| |||||||||||||||| Sbjct: 111 ttttatgaaagatataataaaatgaaaat 83
>emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O15 on chromosome X Contains a ribosomal protein L26 pseudogene, complete sequence Length = 183876 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatata 44 ||||||||||||||||||||| Sbjct: 134522 aaataataaaatgaaaatata 134542
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence Length = 226483 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aataaaatgaaaatataaatg 48 ||||||||||||||||||||| Sbjct: 61525 aataaaatgaaaatataaatg 61505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tagaaataataaaatgaaaa 40 |||||||||||||||||||| Sbjct: 23725 tagaaataataaaatgaaaa 23706
>emb|AL669912.7| Mouse DNA sequence from clone RP23-147K24 on chromosome 11 Contains a serine/threonine kinase 16 (Stk16) pseudogene pseudogene, complete sequence Length = 174954 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 atagaaataataaaatgaaaatata 44 ||||||| ||||||||||||||||| Sbjct: 92830 atagaaacaataaaatgaaaatata 92806
>gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 gagccggtgccaccaccgacg 617 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 gagccggtgccaccaccgacg 617 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, partial cds Length = 1094 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 gagccggtgccaccaccgacg 617 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, partial cds Length = 1082 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 gagccggtgccaccaccgacg 617 ||||||||||||||||||||| Sbjct: 313 gagccggtgccaccaccgacg 293
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430501C11 product:unclassifiable, full insert sequence Length = 1789 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 tcatacatatctccagccacatgtt 498 |||||||||| |||||||||||||| Sbjct: 1024 tcatacatatatccagccacatgtt 1048
>gb|AC104072.3| Homo sapiens BAC clone RP11-320H14 from 4, complete sequence Length = 112494 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 taataaaatgaaaatataaat 47 ||||||||||||||||||||| Sbjct: 77378 taataaaatgaaaatataaat 77398
>gb|AC026523.9| Homo sapiens chromosome 15, clone RP11-461F11, complete sequence Length = 175770 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 aataataaaatgaaaatataa 45 ||||||||||||||||||||| Sbjct: 71328 aataataaaatgaaaatataa 71308
>gb|AC093745.3| Homo sapiens BAC clone RP11-25B15 from 4, complete sequence Length = 166191 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 taataaaatgaaaatataaat 47 ||||||||||||||||||||| Sbjct: 68169 taataaaatgaaaatataaat 68189
>gb|AC007403.4| Homo sapiens BAC clone RP11-547F18 from 2, complete sequence Length = 176321 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatataaatgagca 52 ||||| ||||||||||| ||||||||||| Sbjct: 38357 aaatactaaaatgaaaaaataaatgagca 38385
>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence Length = 145918 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaata 42 ||||||||||||||||||||| Sbjct: 79570 agaaataataaaatgaaaata 79590
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaata 42 ||||||||||||||||||||| Sbjct: 208362 agaaataataaaatgaaaata 208382
>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence Length = 198278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatata 44 ||||||||||||||||||||| Sbjct: 74297 aaataataaaatgaaaatata 74277
>gb|AC003667.3| Homo sapiens X PAC RP1-17L20 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 147371 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatata 44 ||||||||||||||||||||| Sbjct: 37967 aaataataaaatgaaaatata 37947
>gb|AC010874.3|AC010874 Homo sapiens BAC clone RP11-118K2 from Y, complete sequence Length = 114045 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatata 44 ||||||||||||||||||||| Sbjct: 105531 aaataataaaatgaaaatata 105551
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 tgatagaaataataaaatgaaaata 42 ||||| ||||||||||||||||||| Sbjct: 3084 tgataaaaataataaaatgaaaata 3060
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence Length = 150872 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 tcatacatatctccagccacatgtt 498 |||||||||| |||||||||||||| Sbjct: 45951 tcatacatatatccagccacatgtt 45975
>gb|AC079750.5| Homo sapiens BAC clone RP11-33L3 from 2, complete sequence Length = 103089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 gcttttatgatagaaataata 31 ||||||||||||||||||||| Sbjct: 46170 gcttttatgatagaaataata 46150
>gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, complete sequence Length = 224634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ataataaaatgaaaatataaa 46 ||||||||||||||||||||| Sbjct: 48658 ataataaaatgaaaatataaa 48678
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24 Length = 87487 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 tttatgatagaaataataaaa 34 ||||||||||||||||||||| Sbjct: 9619 tttatgatagaaataataaaa 9639
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 agttgaagaatatgtaggttttctt 190 |||||||||| |||||||||||||| Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence Length = 172079 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 atagaaataataaaatgaaaatata 44 |||||| |||||||||||||||||| Sbjct: 92369 atagaattaataaaatgaaaatata 92345
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aataaaatgaaaatataaatg 48 ||||||||||||||||||||| Sbjct: 181101 aataaaatgaaaatataaatg 181081 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tagaaataataaaatgaaaa 40 |||||||||||||||||||| Sbjct: 143301 tagaaataataaaatgaaaa 143282
>gb|AC102447.11| Mus musculus chromosome 7, clone RP24-206D20, complete sequence Length = 176911 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatataaat 47 |||||| ||||||||||||||||| Sbjct: 96952 aaataacaaaatgaaaatataaat 96975
>gb|AC169510.1| Mus musculus BAC clone RP23-121E6 from chromosome 14, complete sequence Length = 214403 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 152407 aaataataaaatgaaaatat 152426
>gb|AE001428.1| Plasmodium falciparum 3D7 chromosome 2 section 65 of 73 of the complete sequence Length = 12029 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taaaatgaaaatataaatga 49 |||||||||||||||||||| Sbjct: 29 taaaatgaaaatataaatga 10
>gb|AE001427.1| Plasmodium falciparum 3D7 chromosome 2 section 64 of 73 of the complete sequence Length = 12029 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taaaatgaaaatataaatga 49 |||||||||||||||||||| Sbjct: 11998 taaaatgaaaatataaatga 11979
>gb|AC005200.1| Homo sapiens chromosome 5, P1 clone 793c5 (LBNL H57), complete sequence Length = 79305 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ttttatgatagaaataataa 32 |||||||||||||||||||| Sbjct: 13493 ttttatgatagaaataataa 13512
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence Length = 195926 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 ggagccggtgccaccaccga 615 |||||||||||||||||||| Sbjct: 156214 ggagccggtgccaccaccga 156233
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ctggaagagggaggccttgg 524 |||||||||||||||||||| Sbjct: 111 ctggaagagggaggccttgg 92
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 gagggaggccttgggcgatg 530 |||||||||||||||||||| Sbjct: 265 gagggaggccttgggcgatg 246
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ctggaagagggaggccttgg 524 |||||||||||||||||||| Sbjct: 111 ctggaagagggaggccttgg 92
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 gagggaggccttgggcgatg 530 |||||||||||||||||||| Sbjct: 265 gagggaggccttgggcgatg 246
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence Length = 225321 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttgaagagcacaaacatgat 280 |||||||||||||||||||| Sbjct: 180691 ttgaagagcacaaacatgat 180672
>gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complete sequence Length = 151198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 56864 aaataataaaatgaaaatat 56845
>emb|CT009532.6| Mouse DNA sequence from clone RP23-122B16 on chromosome 14, complete sequence Length = 187658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 129595 aaataataaaatgaaaatat 129576
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence Length = 25359 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gaactcgtcgtcgttaagca 426 |||||||||||||||||||| Sbjct: 23437 gaactcgtcgtcgttaagca 23418
>gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosome 16, complete sequence Length = 167118 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 133842 aataaaatgaaaatataaat 133861
>ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06739) partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaa-tataaatgag 50 ||||||||||||||||| |||||||||| Sbjct: 702 aaataataaaatgaaaagtataaatgag 729
>gb|AC093813.3| Homo sapiens BAC clone RP11-362B23 from 7, complete sequence Length = 120466 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 taataaaatgaaaatataaa 46 |||||||||||||||||||| Sbjct: 10868 taataaaatgaaaatataaa 10887
>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence Length = 182372 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaatgaaaatataaatgag 50 |||||||||||||||||||| Sbjct: 13637 aaaatgaaaatataaatgag 13656
>gb|AY386836.1| Ascaris suum AF17 A mRNA, 3' partial cds; alternatively spliced Length = 796 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 25 aataataaaatgaaaatataaatgagca 52 |||||||| | ||||||||||||||||| Sbjct: 492 aataataatacgaaaatataaatgagca 519
>ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical protein (PB000547.00.0) partial mRNA Length = 2673 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 24 aaataataaaatg-aaaatataaatgag 50 ||||||||||||| |||||||||||||| Sbjct: 1683 aaataataaaatgaaaaatataaatgag 1710
>gb|AC158569.7| Mus musculus chromosome 7, clone RP24-65P20, complete sequence Length = 177045 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatataaat 47 |||||| ||||||||||||||||| Sbjct: 29859 aaataacaaaatgaaaatataaat 29836
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21, complete sequence Length = 110730 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atagaaataataaaatgaaa 39 |||||||||||||||||||| Sbjct: 6531 atagaaataataaaatgaaa 6550
>emb|AL592103.10| Human DNA sequence from clone RP11-62I21 on chromosome 1 Contains a novel gene and a novel pseudogene, complete sequence Length = 101020 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatataaat 47 ||||||||||| |||||||||||| Sbjct: 1364 aaataataaaaagaaaatataaat 1341
>emb|AL589763.6| Human DNA sequence from clone RP11-290P14 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ33608), an aldo-keto reductase family 1 member B1 (aldose reductase) (AKR1B1) pseudogene, the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 166772 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatataaat 47 ||||||||||| |||||||||||| Sbjct: 166136 aaataataaaaagaaaatataaat 166113
>emb|AL591022.6| Human DNA sequence from clone RP13-485J5 on chromosome Xq27.3-28, complete sequence Length = 89747 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 20 atagaaataataaaatgaaaatataaat 47 ||||||| ||||||||||||||| |||| Sbjct: 71057 atagaaaaaataaaatgaaaataaaaat 71084
>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23, complete sequence Length = 167514 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaatgaaaatataaatgag 50 |||||||||||||||||||| Sbjct: 27498 aaaatgaaaatataaatgag 27517
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaatataa 45 |||||||||||||| ||||||||| Sbjct: 126767 agaaataataaaattaaaatataa 126790
>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence Length = 196465 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 112506 aaataataaaatgaaaatat 112525
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tggcaaactccttctccgtc 245 |||||||||||||||||||| Sbjct: 340353 tggcaaactccttctccgtc 340372
>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete sequence Length = 186135 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 56409 aataaaatgaaaatataaat 56428
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aaacatgatgatatccaagg 291 |||||||||||||||||||| Sbjct: 120643 aaacatgatgatatccaagg 120624
>emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 in linkage group 18, complete sequence Length = 172599 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaata 42 |||||||||||||||||||| Sbjct: 96369 gaaataataaaatgaaaata 96388 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaata 42 |||||||||||||||||||| Sbjct: 91914 gaaataataaaatgaaaata 91933
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 acaaacatgatgatatccaa 289 |||||||||||||||||||| Sbjct: 111959 acaaacatgatgatatccaa 111978
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK101 Length = 734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttttgggagagcgttgtggc 387 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK89 Length = 734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttttgggagagcgttgtggc 387 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK41 Length = 728 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttttgggagagcgttgtggc 387 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK35 Length = 734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttttgggagagcgttgtggc 387 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 207812 aataaaatgaaaatataaat 207831
>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence Length = 170284 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gatagaaataataaaatgaa 38 |||||||||||||||||||| Sbjct: 152801 gatagaaataataaaatgaa 152820
>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 13215 aataaaatgaaaatataaat 13196
>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence Length = 181245 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 143685 aaataataaaatgaaaatat 143666
>gb|AC097497.2| Homo sapiens BAC clone RP11-324J17 from 4, complete sequence Length = 195069 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ataaaatgaaaatataaatg 48 |||||||||||||||||||| Sbjct: 2978 ataaaatgaaaatataaatg 2959
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence Length = 160672 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ttttatgatagaaataataa 32 |||||||||||||||||||| Sbjct: 23672 ttttatgatagaaataataa 23691
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic sequence Length = 3734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aaaagttgaagaatatgtag 182 |||||||||||||||||||| Sbjct: 177 aaaagttgaagaatatgtag 158
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic sequence Length = 3383 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aaaagttgaagaatatgtag 182 |||||||||||||||||||| Sbjct: 2238 aaaagttgaagaatatgtag 2257
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence Length = 161619 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gatagaaataataaaatgaa 38 |||||||||||||||||||| Sbjct: 41177 gatagaaataataaaatgaa 41196
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaat 41 |||||||||||||||||||| Sbjct: 124180 agaaataataaaatgaaaat 124199
>gb|AC020930.7|AC020930 Homo sapiens chromosome 5 clone CTD-2239K17, complete sequence Length = 107160 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaatataaatga 49 |||||||| |||||||||||| |||||| Sbjct: 95200 agaaataagaaaatgaaaataaaaatga 95227
>gb|AC083799.17| Homo sapiens 3 BAC RP11-332M2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184129 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatat 43 |||||||||||||||||||| Sbjct: 44934 aaataataaaatgaaaatat 44953
>gb|AC024581.3|AC024581 Homo sapiens chromosome 5 clone CTD-3066C23, complete sequence Length = 162899 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaatataaa 46 ||||||||||||| |||||||||| Sbjct: 86053 gaaataataaaataaaaatataaa 86076
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 453 gcatctccagtgggtatactctcatacatatctcca 488 ||||||||| |||| | ||||||| ||||||||||| Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
>gb|AC069384.6| Homo sapiens BAC clone RP11-205B19 from 2, complete sequence Length = 166975 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatataaat 47 ||||||||||||||||||| |||| Sbjct: 22026 aaataataaaatgaaaataaaaat 22049
>gb|AC008939.8| Homo sapiens chromosome 5 clone CTD-2316B1, complete sequence Length = 112755 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 agaaataataaaatgaaaatataaatga 49 |||||||| |||||||||||| |||||| Sbjct: 15583 agaaataagaaaatgaaaataaaaatga 15610
>gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence Length = 180643 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taaaatgaaaatataaatga 49 |||||||||||||||||||| Sbjct: 158923 taaaatgaaaatataaatga 158904
>gb|AC134676.5| Homo sapiens chromosome 15, clone CTD-2290E14, complete sequence Length = 93881 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 taataaaatgaaaatataaa 46 |||||||||||||||||||| Sbjct: 22003 taataaaatgaaaatataaa 21984
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic sequence Length = 2995 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aaaagttgaagaatatgtag 182 |||||||||||||||||||| Sbjct: 1549 aaaagttgaagaatatgtag 1530
>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence Length = 132353 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 taataaaatgaaaatataaa 46 |||||||||||||||||||| Sbjct: 22084 taataaaatgaaaatataaa 22065
>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence Length = 194754 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 taataaaatgaaaatataaa 46 |||||||||||||||||||| Sbjct: 169094 taataaaatgaaaatataaa 169113
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence Length = 42412 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gagggaggccttgggcgatg 530 |||||||||||||||||||| Sbjct: 5744 gagggaggccttgggcgatg 5763
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11 Length = 46353 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gagggaggccttgggcgatg 530 |||||||||||||||||||| Sbjct: 39948 gagggaggccttgggcgatg 39967
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aaaagttgaagaatatgtag 182 |||||||||||||||||||| Sbjct: 226670 aaaagttgaagaatatgtag 226689
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete sequence Length = 189984 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaata 42 |||||||||||||||||||| Sbjct: 93346 gaaataataaaatgaaaata 93365 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaata 42 |||||||||||||||||||| Sbjct: 88900 gaaataataaaatgaaaata 88919 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaaataataaaatgaaaata 42 |||||||||||||||||||| Sbjct: 84424 gaaataataaaatgaaaata 84443
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cggtaaatccagcttgtttg 218 |||||||||||||||||||| Sbjct: 147510 cggtaaatccagcttgtttg 147491
>emb|CT476801.2| RP43-004N07, complete sequence Length = 182257 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 90054 aataaaatgaaaatataaat 90073
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209111 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tagaaataataaaatgaaaa 40 |||||||||||||||||||| Sbjct: 1709 tagaaataataaaatgaaaa 1728
>emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1082A3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tagaaataataaaatgaaaa 40 |||||||||||||||||||| Sbjct: 153269 tagaaataataaaatgaaaa 153288
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 atgatagaaataataaaatg 36 |||||||||||||||||||| Sbjct: 940104 atgatagaaataataaaatg 940123
>emb|CR972866.3| RP43-009N23, complete sequence Length = 201804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 113791 aataaaatgaaaatataaat 113810
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence Length = 162405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggctagcctggcaaactcct 237 |||||||||||||||||||| Sbjct: 87830 ggctagcctggcaaactcct 87811
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aaaagttgaagaatatgtag 182 |||||||||||||||||||| Sbjct: 342005 aaaagttgaagaatatgtag 342024
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete sequence Length = 86000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcccttgaagagcacaaaca 276 |||||||||||||||||||| Sbjct: 62557 tcccttgaagagcacaaaca 62538
>emb|CT485784.2| RP43-026J01, complete sequence Length = 201375 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 76170 aataaaatgaaaatataaat 76189
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttgaagagcacaaacatgat 280 |||||||||||||||||||| Sbjct: 79901 ttgaagagcacaaacatgat 79882
>gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, complete sequence Length = 207240 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aataaaatgaaaatataaat 47 |||||||||||||||||||| Sbjct: 147179 aataaaatgaaaatataaat 147198
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18, complete sequence Length = 193827 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cggtaaatccagcttgtttg 218 |||||||||||||||||||| Sbjct: 173244 cggtaaatccagcttgtttg 173225
>dbj|AP005202.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2124B20, complete sequence Length = 136283 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaataataaaatgaaaatataaat 47 ||||||||||||||||||| |||| Sbjct: 46183 aaataataaaatgaaaataaaaat 46206
>emb|AL807775.8| Mouse DNA sequence from clone RP23-149H3 on chromosome X, complete sequence Length = 185599 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taaaatgaaaatataaatga 49 |||||||||||||||||||| Sbjct: 39720 taaaatgaaaatataaatga 39739
>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete sequence Length = 171320 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atagaaataataaaatgaaa 39 |||||||||||||||||||| Sbjct: 159096 atagaaataataaaatgaaa 159077
>emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chromosome X, complete sequence Length = 165720 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 18 tgatagaaataataaaatgaaaatataaatga 49 ||||| |||||||||||||| |||| |||||| Sbjct: 158685 tgatataaataataaaatgataataaaaatga 158716
>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171887 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aaaatgaaaatataaatgag 50 |||||||||||||||||||| Sbjct: 169346 aaaatgaaaatataaatgag 169327
>dbj|AP002075.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2230O14, complete sequence Length = 118977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aataataaaatgaaaatata 44 |||||||||||||||||||| Sbjct: 100054 aataataaaatgaaaatata 100073 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,366,896 Number of Sequences: 3902068 Number of extensions: 5366896 Number of successful extensions: 131233 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 130635 Number of HSP's gapped (non-prelim): 597 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
