| Clone Name | rbags29a22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GRIK4_PANTR (Q5IS46) Glutamate receptor, ionotropic kainate 4 pr... | 30 | 9.4 | 2 | GRIK4_HUMAN (Q16099) Glutamate receptor, ionotropic kainate 4 pr... | 30 | 9.4 |
|---|
>GRIK4_PANTR (Q5IS46) Glutamate receptor, ionotropic kainate 4 precursor| Length = 956 Score = 29.6 bits (65), Expect = 9.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 Query: 706 SASLPLLPCWLVSINCAFHSL 644 SA L LLP WLV + C+ HSL Sbjct: 5 SAPLVLLPAWLVMVACSPHSL 25
>GRIK4_HUMAN (Q16099) Glutamate receptor, ionotropic kainate 4 precursor| (Glutamate receptor KA-1) (KA1) (Excitatory amino acid receptor 1) (EAA1) Length = 956 Score = 29.6 bits (65), Expect = 9.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 Query: 706 SASLPLLPCWLVSINCAFHSL 644 SA L LLP WLV + C+ HSL Sbjct: 5 SAPLVLLPAWLVMVACSPHSL 25 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,904,370 Number of Sequences: 219361 Number of extensions: 2002274 Number of successful extensions: 4233 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4181 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4233 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)