>dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133J10, full
            insert sequence
          Length = 3753

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Minus

                                                                        
Query: 207  catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 266
            |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 1293 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 1234

                                                                        
Query: 267  cacctccctcgccctacccgcacaaaatattgcataagcatcagctgcatacttgccgac 326
            ||||||  | ||||| |||||||| || |||||||||||||||||||| |||||||| ||
Sbjct: 1233 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgcgtacttgccaac 1174

                       
Query: 327  gccacaaagct 337
             ||||||||||
Sbjct: 1173 accacaaagct 1163



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 46/56 (82%)
 Strand = Plus / Minus

                                                                   
Query: 523 ccctgtgttaagtngaggaacacncanatganaataaccttncacggntcanaagc 578
           ||||||||||||| ||||| ||  || |||| ||| ||||| ||||| ||| ||||
Sbjct: 977 ccctgtgttaagttgaggagcatgcagatgacaatgaccttccacgggtcagaagc 922

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score =  103 bits (52), Expect = 6e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                          
Query: 207    catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 266
              |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 193665 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 193724

                                                              
Query: 267    cacctccctcgccctacccgcacaaaatattgcataagcatcagctgc 314
              ||||||  | ||||| |||||||| || ||||||||||||||||||||
Sbjct: 193725 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 193772



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 46/56 (82%)
 Strand = Plus / Plus

                                                                      
Query: 523    ccctgtgttaagtngaggaacacncanatganaataaccttncacggntcanaagc 578
              ||||||||||||| ||||| ||  || |||| ||| ||||| ||||| ||| ||||
Sbjct: 194541 ccctgtgttaagttgaggagcatgcagatgacaatgaccttccacgggtcagaagc 194596

>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0066B16
          Length = 190143

 Score =  103 bits (52), Expect = 6e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 207   catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 266
             |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 89163 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 89222

                                                             
Query: 267   cacctccctcgccctacccgcacaaaatattgcataagcatcagctgc 314
             ||||||  | ||||| |||||||| || ||||||||||||||||||||
Sbjct: 89223 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 89270



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 46/56 (82%)
 Strand = Plus / Plus

                                                                     
Query: 523   ccctgtgttaagtngaggaacacncanatganaataaccttncacggntcanaagc 578
             ||||||||||||| ||||| ||  || |||| ||| ||||| ||||| ||| ||||
Sbjct: 90039 ccctgtgttaagttgaggagcatgcagatgacaatgaccttccacgggtcagaagc 90094

>emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chromosome 1 Contains part
             of the NFIA gene for nuclear factor I/A, complete sequence
          Length = 78404

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 178   atactggaactgaactaatcca 199
             ||||||||||||||||||||||
Sbjct: 78037 atactggaactgaactaatcca 78058

>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence
          Length = 215326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 327   gccacaaagctgcgtaacatgggtc 351
             |||||||||||||||||| ||||||
Sbjct: 38871 gccacaaagctgcgtaacgtgggtc 38895

>emb|AL592299.6| Human DNA sequence from clone RP11-498P10 on chromosome 1 Contains the
             3' end of the RGL1 gene for ral guanine nucleotide
             dissociation stimulator-like 1 and the 3' end of the
             C1orf17 gene for chromosome 1 open reading frame 17,
             complete sequence
          Length = 79210

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 486   ttcaaagaagccctccaacatcctc 510
             ||||||||||||||||||| |||||
Sbjct: 24514 ttcaaagaagccctccaacctcctc 24538

>dbj|AK125410.1| Homo sapiens cDNA FLJ43421 fis, clone OCBBF2026649
          Length = 2581

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 486  ttcaaagaagccctccaacatcctc 510
            ||||||||||||||||||| |||||
Sbjct: 1814 ttcaaagaagccctccaacctcctc 1790

>gb|AC099706.8| Mus musculus, clone RP23-267P24, complete sequence
          Length = 168307

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 288    acaaaatattgcataagcatc 308
              |||||||||||||||||||||
Sbjct: 120689 acaaaatattgcataagcatc 120709

>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence
          Length = 167135

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 327    gccacaaagctgcgtaacatgggtc 351
              |||||||||||||||||| ||||||
Sbjct: 114741 gccacaaagctgcgtaacgtgggtc 114765

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 296    ttgcataagcatcagctgcat 316
              |||||||||||||||||||||
Sbjct: 700491 ttgcataagcatcagctgcat 700471

>gb|AC166749.6| Mus musculus chromosome 1, clone RP23-463A15, complete sequence
          Length = 186262

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 288    acaaaatattgcataagcatc 308
              |||||||||||||||||||||
Sbjct: 172918 acaaaatattgcataagcatc 172938

>ref|NM_115015.1| Arabidopsis thaliana ATP binding / transmembrane receptor AT3G51560
            mRNA, complete cds
          Length = 3762

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  atttcttgatattgcgtgtc 399
            ||||||||||||||||||||
Sbjct: 1212 atttcttgatattgcgtgtc 1231

>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230137

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ccacagctgcttccccttgc 163
             ||||||||||||||||||||
Sbjct: 60236 ccacagctgcttccccttgc 60255

>gb|AC128571.4| Rattus norvegicus 6 BAC CH230-424O13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 194127

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   gggtccattcatttccaaca 366
             ||||||||||||||||||||
Sbjct: 40690 gggtccattcatttccaaca 40709

>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence
          Length = 218074

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   caaagaagccctccaacatc 507
             ||||||||||||||||||||
Sbjct: 50710 caaagaagccctccaacatc 50691

>emb|AL160168.11| Human DNA sequence from clone RP11-394O9 on chromosome 9, complete
              sequence
          Length = 151202

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    gctgcttccccttgcacttc 168
              ||||||||||||||||||||
Sbjct: 102368 gctgcttccccttgcacttc 102387

>emb|AL137855.10| Human DNA sequence from clone RP5-1064J9 on chromosome 1p32.2-33,
             complete sequence
          Length = 106970

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   acaaaatattgcataagcat 307
             ||||||||||||||||||||
Sbjct: 24073 acaaaatattgcataagcat 24092

>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13
          Length = 94349

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   atttcttgatattgcgtgtc 399
             ||||||||||||||||||||
Sbjct: 70334 atttcttgatattgcgtgtc 70315

>emb|AL132968.1|ATT18N14 Arabidopsis thaliana DNA chromosome 3, BAC clone T18N14
          Length = 79867

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  atttcttgatattgcgtgtc 399
            ||||||||||||||||||||
Sbjct: 5813 atttcttgatattgcgtgtc 5794

>gb|AC101846.8| Mus musculus chromosome 5, clone RP23-258M22, complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   ctcaaagcagacataattccagta 239
             ||||||||||||| ||||||||||
Sbjct: 68242 ctcaaagcagacaaaattccagta 68265

>gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, complete sequence
          Length = 173346

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    tactgcttggacaatttctt 386
              ||||||||||||||||||||
Sbjct: 123643 tactgcttggacaatttctt 123624

>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   tactgcttggacaatttctt 386
             ||||||||||||||||||||
Sbjct: 42519 tactgcttggacaatttctt 42500

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    ccatccaggactgcatggcgccgc 140
              ||||||||||||| ||||||||||
Sbjct: 834883 ccatccaggactggatggcgccgc 834860

>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete
              sequence
          Length = 227762

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    tcaaagcagacataattcca 236
              ||||||||||||||||||||
Sbjct: 127415 tcaaagcagacataattcca 127434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,155,095
Number of Sequences: 3902068
Number of extensions: 4155095
Number of successful extensions: 73505
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73425
Number of HSP's gapped (non-prelim): 80
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)