| Clone Name | rbags28l21 |
|---|---|
| Clone Library Name | barley_pub |
>GPA1_TRIVA (Q86D96) Guanine nucleotide-binding protein alpha-1 subunit (G| alpha-1) (GTP-binding protein alpha subunit 1) Length = 402 Score = 31.2 bits (69), Expect = 1.6 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 Query: 225 KPQPEPQKPSEATPTPVP 278 +PQPEP KP+E P P P Sbjct: 42 QPQPEPPKPAEPAPAPAP 59
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 30.8 bits (68), Expect = 2.1 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3 Query: 225 KPQPEPQKPSEATPTPVP 278 +P+PEP+ EATPTP P Sbjct: 245 QPEPEPEPEREATPTPAP 262
>V50K_BYDVP (P09516) 50 kDa protein (ORF 4)| Length = 450 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 Query: 219 TAKPQPEPQKPSEATPTPVPLEVIDYM 299 T +P P PQ E TP PVP +Y+ Sbjct: 17 TPQPTPAPQPTPEPTPAPVPKRFFEYI 43
>TOB1_RAT (Q8R5K6) Tob1 protein (Transducer of erbB-2 1)| Length = 365 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 186 NSLLALGMS*QTAKPQPEPQKPSEATPTPVP 278 +SL LG+ Q +PQP+PQ+P P P P Sbjct: 229 HSLYGLGLGSQQ-QPQPQPQQPPSQPPPPPP 258
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +3 Query: 201 LGMS*QTAKPQPEPQKPSEATPTPVPLEVIDYMLPHFSL 317 +G A P P P A P P V+DY LP+ +L Sbjct: 438 VGQVVSNAMPAPAPAAAPVAAAPPAPPRVVDYRLPNVAL 476
>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Proline- and glutamine-rich protein) (PQR protein) Length = 261 Score = 29.3 bits (64), Expect = 6.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 225 KPQPEPQKPSEATPTPVPLEVIDYMLPH 308 +PQP+PQ + P P P ++ Y PH Sbjct: 182 QPQPQPQPQPQPQPQPQPQQLHSYPHPH 209
>LY75_MESAU (Q920P9) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)| Length = 1722 Score = 28.9 bits (63), Expect = 7.8 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 10/112 (8%) Frame = +3 Query: 177 QACNSLLALGMS*QTAKPQPEPQKPSEATPTP----------VPLEVIDYMLPHFSLFYS 326 ++C S AL + K PQ+P EATP P P + Y + H Sbjct: 612 KSCRSFRALSI----CKKMSGPQEPEEATPKPDEPCPEGWHTFPSNLSCYKVFHIERTVR 667 Query: 327 RI*GEQVLDFTWDACGMGTGCHPPCLSHKSQLYSCS*PHHWPQAQHSSEIWL 482 R E+ F G H P SH +++ H Q Q S + WL Sbjct: 668 RRTWEEAERFC-----QALGAHLPSFSHMNEVKEFL---HLLQDQFSVQRWL 711 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,970,125 Number of Sequences: 219361 Number of extensions: 1497272 Number of successful extensions: 5429 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5308 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)