| Clone Name | rbags28l18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC095032.3| Homo sapiens chromosome 1 clone RP11-153F1, complete sequence Length = 157344 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 attatcttcataaatataaat 145 ||||||||||||||||||||| Sbjct: 143171 attatcttcataaatataaat 143151
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete sequence Length = 191686 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 ccacattatcttcataaatat 141 ||||||||||||||||||||| Sbjct: 187254 ccacattatcttcataaatat 187274
>emb|BX950207.15| Zebrafish DNA sequence from clone CH211-10H13 in linkage group 5, complete sequence Length = 129862 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 attatcttcataaatataaat 145 ||||||||||||||||||||| Sbjct: 122134 attatcttcataaatataaat 122154
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 aacctacatacaggcaaaaagaagaact 80 |||| ||||||||| ||||||||||||| Sbjct: 103762 aacccacatacagggaaaaagaagaact 103735
>gb|BC073063.1| Xenopus laevis hypothetical protein LOC443618, mRNA (cDNA clone IMAGE:5074625), partial cds Length = 2140 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ttcataaatataaatggtaa 150 |||||||||||||||||||| Sbjct: 2073 ttcataaatataaatggtaa 2092
>emb|AL354978.20| Human DNA sequence from clone RP11-266I14 on chromosome 1 Contains the 3' end of a novel gene (DKFZp761D221), a novel gene (FLJ40873) a novel gene, the INSL5 gene for insulin-like 5 and the 3' end of a novel gene (FLJ23129), complete sequence Length = 98450 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cacattatcttcataaatataaat 145 |||||||| ||||||||||||||| Sbjct: 20066 cacattatattcataaatataaat 20089
>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caggcaaaaagaagaactgc 82 |||||||||||||||||||| Sbjct: 36314 caggcaaaaagaagaactgc 36333
>gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, complete sequence Length = 138097 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 catacaggcaaaaagaagaa 78 |||||||||||||||||||| Sbjct: 86196 catacaggcaaaaagaagaa 86215
>gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, complete sequence Length = 203270 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 catacaggcaaaaagaagaa 78 |||||||||||||||||||| Sbjct: 194383 catacaggcaaaaagaagaa 194364
>gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, complete sequence Length = 166236 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 atcttcataaatataaatgg 147 |||||||||||||||||||| Sbjct: 72698 atcttcataaatataaatgg 72679
>gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, complete sequence Length = 163777 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 catacaggcaaaaagaagaa 78 |||||||||||||||||||| Sbjct: 8746 catacaggcaaaaagaagaa 8765
>ref|XM_686056.1| PREDICTED: Danio rerio similar to death associated protein kinase 1 (LOC562681), mRNA Length = 1470 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gaagagagcagcccatccaa 54 |||||||||||||||||||| Sbjct: 1348 gaagagagcagcccatccaa 1367
>emb|BX294131.7| Zebrafish DNA sequence from clone CH211-254O18, complete sequence Length = 164141 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gaagagagcagcccatccaa 54 |||||||||||||||||||| Sbjct: 101434 gaagagagcagcccatccaa 101415
>gb|BC090680.1| Danio rerio cDNA clone IMAGE:6908428 Length = 885 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gaagagagcagcccatccaa 54 |||||||||||||||||||| Sbjct: 694 gaagagagcagcccatccaa 713
>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence Length = 213866 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 caggcaaaaagaagaactgc 82 |||||||||||||||||||| Sbjct: 11370 caggcaaaaagaagaactgc 11351
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ataaatataaatggtaacac 153 |||||||||||||||||||| Sbjct: 51197 ataaatataaatggtaacac 51216
>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence Length = 240997 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 aacctacatacaggcaaaaagaagaact 80 |||| ||||||||| ||||||||||||| Sbjct: 107821 aacccacatacagggaaaaagaagaact 107848 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,005,837 Number of Sequences: 3902068 Number of extensions: 2005837 Number of successful extensions: 139322 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139279 Number of HSP's gapped (non-prelim): 43 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)