ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28l17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF479041.1| Triticum aestivum regulatory particle mon-ATPase subunit 3 mRNA, partial cds Length = 480 Score = 827 bits (417), Expect = 0.0 Identities = 462/477 (96%) Strand = Plus / Minus Query: 123 ttaaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggag 182 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 480 ttaaaaatcatcatcatcctcctcggccatgtgctttgccagctcttcctcctgctggag 421 Query: 183 cctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcat 242 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 420 cctttctcggcgcttctcagcgctctccttctccttgtgcgaattcggggggaacctcat 361 Query: 243 ggccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagc 302 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 360 ggccttgaccgcttcattatgcatgttgaggcagaaagcaattctggagttgaatgcagc 301 Query: 303 ctggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgc 362 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ctggggttcatttgtcgagtagacatcaccagtttctttcgacaccatccagccatttgc 241 Query: 363 atggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgc 422 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 240 atggtctatggtggcatcaattgcaccatctcttatggccttggctacgatgcactccgc 181 Query: 423 atcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagat 482 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 atcagcaacaggattctcagtgtctagccttagcttcttcgcaatatcagcaagagagat 121 Query: 483 ccgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcct 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 120 ccgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcgaagcct 61 Query: 543 cacaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaac 599 ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 60 cacaatcaaattgtgagtcctgtctgcactgaaggtgctcgcaaatttgtctgcaac 4
>gb|AY103743.1| Zea mays PCO080586 mRNA sequence Length = 1852 Score = 601 bits (303), Expect = e-168 Identities = 438/483 (90%) Strand = Plus / Minus Query: 120 aacttaaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctg 179 |||||| || || |||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1606 aacttagaagtcgtcgtcatcatcctcagccatgtgcttagccagttcttcctcctgctg 1547 Query: 180 gagcctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacct 239 ||||| ||||||||||||||||| |||||||| |||||||||||||| ||||| || || Sbjct: 1546 aagcctctctcggcgcttctcagcactctccttttccttgtgagaattaggggggaatct 1487 Query: 240 catggccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgc 299 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1486 catcgccttgaccgcctcattgtgcatgttgaggcagaacgcaatcctggagttgaatgc 1427 Query: 300 agcctggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatt 359 | || || |||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 1426 aatttgtggctcatttgtagagtagacatcaccggtttccttcgataccatccagccatt 1367 Query: 360 tgcatggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactc 419 |||||| ||||||||||| ||||| || |||||||||||||||||||||||||||| ||| Sbjct: 1366 tgcatgatctatggtggcgtcaattgcgccatctcttatggccttggctacaatgctctc 1307 Query: 420 cgcatcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaaggga 479 |||||| |||||||| ||| ||| |||||| ||||||||||| ||||| ||||||||||| Sbjct: 1306 cgcatcagcaacagggttctcagagtctagtcttagcttcttagcaatgtcagcaaggga 1247 Query: 480 gatccgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggag 539 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1246 gatccttgagtaagaaatgctgatgttgcgcagtccagttcgaatgacattgtggcgcag 1187 Query: 540 cctcacaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaac 599 |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1186 cctcacaatcaagttgcgagtcctgtctgcgctgaatgtgcttgcaaatttgtctgcaac 1127 Query: 600 agc 602 ||| Sbjct: 1126 agc 1124
>gb|BT016664.1| Zea mays clone Contig497 mRNA sequence Length = 1385 Score = 537 bits (271), Expect = e-149 Identities = 409/455 (89%) Strand = Plus / Minus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 |||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 1201 tcctcctcagccatgtgcttagccagttcttcctcctgttgaagcctctctcggcgcttc 1142 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 || ||||||||||| ||||| |||||||| ||||| || ||||| ||||||||||| ||| Sbjct: 1141 tcggcgctctccttttccttatgagaattaggggggaatctcatcgccttgaccgcctca 1082 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || ||||||||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 1081 ttgtgcatgttgaggcagaacgcaatcctggagttgaatgcaatttgtggctcatttgta 1022 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 1021 gagtagacatcaccggttttcttcgataccatccagccatttgcatgatctatggtggcg 962 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || |||||||||||||||||||||||||||| ||| ||||| |||||||| ||| Sbjct: 961 tcaattgcgccatctcttatggccttggctacaatgctctctgcatcagcaacagggttc 902 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 ||| ||| || ||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct: 901 tcagagtccagtcttagcttcttagcaatgtcagcaagggagatccttgagtaagaaatg 842 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| || Sbjct: 841 ctgatgttgcgcagtccagttcgaatgacattgtggcgcagcctcacaatcaagttgcga 782 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtc 593 ||||||||||| ||||||||||||||||||||||| Sbjct: 781 gtcctgtctgcgctgaatgtgcttgcaaatttgtc 747
>ref|XM_483674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 490 bits (247), Expect = e-135 Identities = 421/479 (87%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1521 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 1462 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || || ||||||||||| || || ||||| ||||||||||| |||||||| |||| ||| Sbjct: 1461 ctctcacggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcatt 1402 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || || || |||||||| |||||||||||||| || ||||||| |||||||||||| | Sbjct: 1401 gctttcacagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatc 1342 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 1341 tgtggttcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggca 1282 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || ||||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||| Sbjct: 1281 tgatctatggtggcatcaattgcgccatcccttattgccttggctacaatgctctccgca 1222 Query: 424 tcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatc 483 || ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1221 tcagcaacaggattatcagagtcgagccttagcttcttggcaatatcagcaagggagatc 1162 Query: 484 cgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctc 543 || |||||||||||||| || ||||| ||||| |||||||| ||||||||||| | ||| Sbjct: 1161 cgtgagtatgaaatgctaatattgcgcagtccggttcgaataacattgtggcgcaatctc 1102 Query: 544 acaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagc 602 |||||||||||| |||||||||| ||||| || ||||| |||||||||| || ||||| Sbjct: 1101 acaatcaaattgcgagtcctgtcagcactaaaagtgctcacaaatttgtcggcgacagc 1043
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 490 bits (247), Expect = e-135 Identities = 421/479 (87%) Strand = Plus / Plus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 27581467 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 27581526 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || || ||||||||||| || || ||||| ||||||||||| |||||||| |||| ||| Sbjct: 27581527 ctctcacggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcatt 27581586 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || || || |||||||| |||||||||||||| || ||||||| |||||||||||| | Sbjct: 27581587 gctttcacagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatc 27581646 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 27581647 tgtggttcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggca 27581706 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || ||||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||| Sbjct: 27581707 tgatctatggtggcatcaattgcgccatcccttattgccttggctacaatgctctccgca 27581766 Query: 424 tcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatc 483 || ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 27581767 tcagcaacaggattatcagagtcgagccttagcttcttggcaatatcagcaagggagatc 27581826 Query: 484 cgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctc 543 || |||||||||||||| || ||||| ||||| |||||||| ||||||||||| | ||| Sbjct: 27581827 cgtgagtatgaaatgctaatattgcgcagtccggttcgaataacattgtggcgcaatctc 27581886 Query: 544 acaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagc 602 |||||||||||| |||||||||| ||||| || ||||| |||||||||| || ||||| Sbjct: 27581887 acaatcaaattgcgagtcctgtcagcactaaaagtgctcacaaatttgtcggcgacagc 27581945
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 490 bits (247), Expect = e-135 Identities = 421/479 (87%) Strand = Plus / Plus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 63757 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 63816 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || || ||||||||||| || || ||||| ||||||||||| |||||||| |||| ||| Sbjct: 63817 ctctcacggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcatt 63876 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || || || |||||||| |||||||||||||| || ||||||| |||||||||||| | Sbjct: 63877 gctttcacagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatc 63936 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 63937 tgtggttcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggca 63996 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || ||||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||| Sbjct: 63997 tgatctatggtggcatcaattgcgccatcccttattgccttggctacaatgctctccgca 64056 Query: 424 tcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatc 483 || ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 64057 tcagcaacaggattatcagagtcgagccttagcttcttggcaatatcagcaagggagatc 64116 Query: 484 cgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctc 543 || |||||||||||||| || ||||| ||||| |||||||| ||||||||||| | ||| Sbjct: 64117 cgtgagtatgaaatgctaatattgcgcagtccggttcgaataacattgtggcgcaatctc 64176 Query: 544 acaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagc 602 |||||||||||| |||||||||| ||||| || ||||| |||||||||| || ||||| Sbjct: 64177 acaatcaaattgcgagtcctgtcagcactaaaagtgctcacaaatttgtcggcgacagc 64235
>dbj|AK061287.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H08, full insert sequence Length = 1694 Score = 490 bits (247), Expect = e-135 Identities = 421/479 (87%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1521 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 1462 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || || ||||||||||| || || ||||| ||||||||||| |||||||| |||| ||| Sbjct: 1461 ctctcacggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcatt 1402 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || || || |||||||| |||||||||||||| || ||||||| |||||||||||| | Sbjct: 1401 gctttcacagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatc 1342 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 1341 tgtggttcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggca 1282 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || ||||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||| Sbjct: 1281 tgatctatggtggcatcaattgcgccatcccttattgccttggctacaatgctctccgca 1222 Query: 424 tcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatc 483 || ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1221 tcagcaacaggattatcagagtcgagccttagcttcttggcaatatcagcaagggagatc 1162 Query: 484 cgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctc 543 || |||||||||||||| || ||||| ||||| |||||||| ||||||||||| | ||| Sbjct: 1161 cgtgagtatgaaatgctaatattgcgcagtccggttcgaataacattgtggcgcaatctc 1102 Query: 544 acaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagc 602 |||||||||||| |||||||||| ||||| || ||||| |||||||||| || ||||| Sbjct: 1101 acaatcaaattgcgagtcctgtcagcactaaaagtgctcacaaatttgtcggcgacagc 1043
>dbj|AB070258.1| Oryza sativa (japonica cultivar-group) OsRPN3 mRNA for 26S proteasome regulatory particle non-ATPase subunit3, partial cds Length = 1458 Score = 490 bits (247), Expect = e-135 Identities = 421/479 (87%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1259 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 1200 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || || ||||||||||| || || ||||| ||||||||||| |||||||| |||| ||| Sbjct: 1199 ctctcacggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcatt 1140 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || || || |||||||| |||||||||||||| || ||||||| |||||||||||| | Sbjct: 1139 gctttcacagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatc 1080 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 1079 tgtggttcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggca 1020 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || ||||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||| Sbjct: 1019 tgatctatggtggcatcaattgcgccatcccttattgccttggctacaatgctctccgca 960 Query: 424 tcggcaacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatc 483 || ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 959 tcagcaacaggattatcagagtcgagccttagcttcttggcaatatcagcaagggagatc 900 Query: 484 cgcgagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctc 543 || |||||||||||||| || ||||| ||||| |||||||| ||||||||||| | ||| Sbjct: 899 cgtgagtatgaaatgctaatattgcgcagtccggttcgaataacattgtggcgcaatctc 840 Query: 544 acaatcaaattgtgagtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagc 602 |||||||||||| |||||||||| ||||| || ||||| |||||||||| || ||||| Sbjct: 839 acaatcaaattgcgagtcctgtcagcactaaaagtgctcacaaatttgtcggcgacagc 781
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Plus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 21037714 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 21037773 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 21037774 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 21037833 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 21037834 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 21037893 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 21037894 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 21037953 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 21037954 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 21038013 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 21038014 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 21038073 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 21038074 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 21038133 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 21038134 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 21038180
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Plus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 129803 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 129862 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 129863 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 129922 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 129923 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 129982 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 129983 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 130042 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 130043 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 130102 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 130103 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 130162 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 130163 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 130222 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 130223 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 130269
>dbj|AK101536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E17, full insert sequence Length = 1827 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Minus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 1561 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 1502 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1501 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 1442 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 1441 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 1382 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 1381 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 1322 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 1321 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 1262 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 1261 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 1202 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 1201 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 1142 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 1141 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 1095
>dbj|AK100985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D07, full insert sequence Length = 1824 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Minus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 1523 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 1464 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1463 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 1404 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 1403 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 1344 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 1343 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 1284 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 1283 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 1224 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 1223 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 1164 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 1163 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 1104 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 1103 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 1057
>dbj|AK059017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A11, full insert sequence Length = 1019 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Minus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 855 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 796 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 795 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 736 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 735 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 676 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 675 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 616 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 615 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 556 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 555 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 496 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 495 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 436 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 435 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 389
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Plus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 59014 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 59073 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 59074 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 59133 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 59134 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 59193 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 59194 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 59253 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 59254 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 59313 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 59314 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 59373 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 59374 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 59433 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 59434 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 59480
>dbj|AB031299.1| Oryza sativa (japonica cultivar-group) Os21D7 mRNA, complete cds Length = 1776 Score = 355 bits (179), Expect = 1e-94 Identities = 395/467 (84%) Strand = Plus / Minus Query: 139 tcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttctcggcgcttc 198 ||||||||||||||||| ||||| || ||||||||||| |||||||| || || | |||| Sbjct: 1496 tcctcctcagccatgtgttttgctagttcttcctcctgttggagcctctcgcgcctcttc 1437 Query: 199 tcagcgctctccttctccttgtgagaattcgggggaaacctcatggccttgaccgcttca 258 ||||| |||||||| ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1436 tcagcactctccttttccttgtgagaattcggagggaacctcagtgctttgaccgcttcg 1377 Query: 259 ttatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcatttgtt 318 || |||||||| | ||| || |||||||| || ||||| ||| ||| || ||||| ||| Sbjct: 1376 ttgtgcatgttcaagcaaaatgcaatccttgaattgaaagcaatctgtggctcattcgtt 1317 Query: 319 gagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtggca 378 ||||||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 1316 gagtagacatcaccagtctcttttgacaccatccaaccattggcatgatcaatggtggca 1257 Query: 379 tcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacaggattc 438 ||||| || ||||| || || || ||||||||||| | || ||||| |||||||| ||| Sbjct: 1256 tcaattgccccatccctgattgctttggctacaatactttcagcatcagcaacagggttc 1197 Query: 439 ccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaaatg 498 | | ||| | ||| |||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 1196 tctgagtccaacctcagcttcttggcaatgtcagcaagggagatccgtgagtatgaaatg 1137 Query: 499 ctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattgtga 558 || |||||||| | |||||| ||||||||||||||||| |||||||| ||||||||| | Sbjct: 1136 cttatgttgcgcaatccagtccgaatgacattgtggcgcagcctcactatcaaattgcgc 1077 Query: 559 gtcctgtctgcactgaatgtgcttgcaaatttgtctgcaacagctct 605 ||||| || || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 1076 gtcctatccgcgctgaaagtgctagcaaatttttctgccactgctct 1030
>gb|AF100332.1|AF100332 Dendrobium grex Madame Thong-IN putative 21D7 protein (ovg29) mRNA, partial cds Length = 765 Score = 200 bits (101), Expect = 4e-48 Identities = 311/381 (81%) Strand = Plus / Minus Query: 129 atcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttc 188 |||||| || ||||||||||| |||||||| || ||||| | |||||| || ||||||| Sbjct: 559 atcatcatcctcctcctcagcaatgtgcttcgcaagctcctgctcctggtgttgcctttc 500 Query: 189 tcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatggcctt 248 | | |||||| ||||| || ||||| || || ||||| || |||||||||| ||||| Sbjct: 499 cctcctcttctctgcgctttctttctctttatgggaattgggtggaaacctcagcgcctt 440 Query: 249 gaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctgggg 308 ||| ||||||||||||||||| |||||||| ||||| ||||| | ||| ||| ||| || Sbjct: 439 gactgcttcattatgcatgtttaggcagaatgcaattctggaatggaaagcaagctgagg 380 Query: 309 ttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgcatggtc 368 |||||||| ||||||| ||||| ||||||||||| | |||||| ||||| ||||| || Sbjct: 379 ctcatttgtggagtagatgtcaccggtttctttcgatatcatccatccattggcatgatc 320 Query: 369 tatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgcatcggc 428 || || |||||||| || || |||| ||||||||||||||||||| ||| |||||||| Sbjct: 319 aatcgttgcatcaatggcgccgtctcggatggccttggctacaatgctctcggcatcggc 260 Query: 429 aacaggattcccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcga 488 ||||| || ||| ||||| ||| ||||||||||||| || | ||| || || || || Sbjct: 259 gacagggttgtcagagtctaacctcagcttcttcgcaacgtcggaaagagaaattcggga 200 Query: 489 gtatgaaatgctgatgttgcg 509 ||||||||| ||||||||||| Sbjct: 199 gtatgaaatactgatgttgcg 179
>dbj|D13434.1|DAR21D7A Daucus carota mRNA for 21D7 antigen, complete cds Length = 1816 Score = 143 bits (72), Expect = 8e-31 Identities = 255/316 (80%) Strand = Plus / Minus Query: 122 cttaaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctgga 181 ||||||| ||||| ||||| ||||| || || |||||||| ||||||| ||||||||| Sbjct: 1497 cttaaaactcatcatcatcttcctcggctatatgctttgcaagctcttgctcctgctgtt 1438 Query: 182 gcctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctca 241 | || |||| | ||||||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1437 gtctctctctcctcttctcagcactttccttgtccttgtgagaatttgcgggaaatcgaa 1378 Query: 242 tggccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcag 301 || || ||||||||||||||||| ||||| ||||| |||||||| || || || | Sbjct: 1377 gtgcacgaacagcttcattatgcatgttaaggcaaaacgctatcctggaattaaaagctg 1318 Query: 302 cctggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttg 361 | || || |||||||||||||| | || || ||||| || ||||||||||| ||||||| Sbjct: 1317 cttgtggctcatttgttgagtaaatgtctccggtttcctttgacaccatccacccatttg 1258 Query: 362 catggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccg 421 |||| || |||||||| ||||| || ||||| ||||| ||||||| |||||| | || | Sbjct: 1257 catgatcgatggtggcgtcaatggctccatcccttattgccttggatacaatactttcag 1198 Query: 422 catcggcaacaggatt 437 |||| ||||||||||| Sbjct: 1197 catcagcaacaggatt 1182 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||||||||| ||||||||||| || ||||||| |||||||| || || ||||| ||| Sbjct: 1132 gagtatgaaatactgatgttgcgaagcccagttcttatgacattatgacgaagcctgaca 1073 Query: 547 atcaaattgtgagtcctgtctgcactgaatgtgct 581 |||| ||| || |||| ||||||| |||||||||| Sbjct: 1072 atcagattatgggtccggtctgcagtgaatgtgct 1038
>ref|NM_101873.2| Arabidopsis thaliana EMB2719 AT1G20200 (EMB2719) mRNA, complete cds Length = 1804 Score = 109 bits (55), Expect = 1e-20 Identities = 247/311 (79%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1595 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1536 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 1535 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 1476 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1475 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 1416 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || || ||||| || ||||||| || ||||||||||| || ||||| || || ||| Sbjct: 1415 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccatgcatccgtttttg 1356 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || || || || ||||||||||| || || | ||||||||| || || |||| |||||| Sbjct: 1355 tgatcgattgtagcatcaatagctccgtcgcgtatggcctttgccacgatgctttccgca 1296 Query: 424 tcggcaacagg 434 || || ||||| Sbjct: 1295 tcagccacagg 1285
>gb|AY230831.1| Arabidopsis thaliana 26S proteasome subunit RPN3a (RPN3a) mRNA, complete cds Length = 1476 Score = 109 bits (55), Expect = 1e-20 Identities = 247/311 (79%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1466 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1407 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 1406 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 1347 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1346 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 1287 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || || ||||| || ||||||| || ||||||||||| || ||||| || || ||| Sbjct: 1286 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccatgcatccgtttttg 1227 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || || || || ||||||||||| || || | ||||||||| || || |||| |||||| Sbjct: 1226 tgatcgattgtagcatcaatagctccgtcgcgtatggcctttgccacgatgctttccgca 1167 Query: 424 tcggcaacagg 434 || || ||||| Sbjct: 1166 tcagccacagg 1156
>gb|AY120740.1| Arabidopsis thaliana putative proteasome regulatory subunit S3 (At1g20200) mRNA, complete cds Length = 1736 Score = 109 bits (55), Expect = 1e-20 Identities = 247/311 (79%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1552 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1493 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 1492 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 1433 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1432 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 1373 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || || ||||| || ||||||| || ||||||||||| || ||||| || || ||| Sbjct: 1372 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccatgcatccgtttttg 1313 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || || || || ||||||||||| || || | ||||||||| || || |||| |||||| Sbjct: 1312 tgatcgattgtagcatcaatagctccgtcgcgtatggcctttgccacgatgctttccgca 1253 Query: 424 tcggcaacagg 434 || || ||||| Sbjct: 1252 tcagccacagg 1242
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 109 bits (55), Expect = 1e-20 Identities = 247/311 (79%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 10526 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 10467 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 10466 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 10407 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 10406 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 10347 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || || ||||| || ||||||| || ||||||||||| || ||||| || || ||| Sbjct: 10346 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccatgcatccgtttttg 10287 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || || || || ||||||||||| || || | ||||||||| || || |||| |||||| Sbjct: 10286 tgatcgattgtagcatcaatagctccgtcgcgtatggcctttgccacgatgctttccgca 10227 Query: 424 tcggcaacagg 434 || || ||||| Sbjct: 10226 tcagccacagg 10216
>dbj|AK058374.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G09, full insert sequence Length = 359 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 77 taaaaatcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagc 18 Query: 184 ctttctcggcgcttctc 200 || || ||||||||||| Sbjct: 17 ctctcacggcgcttctc 1
>gb|AY057520.1| Arabidopsis thaliana At1g20200/T20H2_4 mRNA, complete cds Length = 1778 Score = 101 bits (51), Expect = 3e-18 Identities = 246/311 (79%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1593 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1534 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || ||||||||| Sbjct: 1533 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaagaaacctcaat 1474 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1473 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 1414 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgca 363 || || ||||| || ||||||| || ||||||||||| || ||||| || || ||| Sbjct: 1413 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccatgcatccgtttttg 1354 Query: 364 tggtctatggtggcatcaatagcaccatctcttatggccttggctacaatgcactccgca 423 || || || || ||||||||||| || || | ||||||||| || || |||| |||||| Sbjct: 1353 tgatcgattgtagcatcaatagctccgtcgcgtatggcctttgccacgatgctttccgca 1294 Query: 424 tcggcaacagg 434 || || ||||| Sbjct: 1293 tcagccacagg 1283
>gb|AY088940.1| Arabidopsis thaliana clone 101030 mRNA, complete sequence Length = 1795 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||| ||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1586 taaaagtcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1527 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 1526 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 1467 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcc 303 || |||| ||||| |||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1466 gctctgacagcttcgttatgcatgttgaggcagaaagcaattcttgagttgaacgcagtt 1407 Query: 304 tggggttcatttgttgagtagacatcaccagtttctttcgacaccat 350 || || ||||| || ||||||| || ||||||||||| || ||||| Sbjct: 1406 tgtggctcattcgtcgagtagatgtccccagtttctttggagaccat 1360
>emb|BX815258.1|CNS0ADZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1732 Score = 87.7 bits (44), Expect = 4e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 124 taaaaatcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagc 183 ||||||||||| || || ||||||||||| ||||| || |||||||| ||||| || | Sbjct: 1518 taaaaatcatcatcgtcttcctcagccatatgcttagcaagctcttcttcctgttgcttc 1459 Query: 184 ctttctcggcgcttctcagcgctctccttctccttgtgagaattcgggggaaacctcatg 243 || |||| | ||||||| |||| || ||||||||||||| || || |||||||||| Sbjct: 1458 ctctctctcctcttctcatcgctttctttctccttgtgagtgttaggaggaaacctcaat 1399 Query: 244 gccttgaccgcttcattatgcatgttgaggcagaacgcaa 283 || |||| ||||| |||||||||||||||||||| |||| Sbjct: 1398 gctctgacagcttcgttatgcatgttgaggcagaaagcaa 1359
>dbj|AB001422.1| Nicotiana tabacum mRNA for 21D7, complete cds Length = 1718 Score = 81.8 bits (41), Expect = 2e-12 Identities = 236/301 (78%) Strand = Plus / Minus Query: 256 tcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggttcattt 315 ||||||||||| || || ||||| ||||| || ||||| || ||| || || |||||| Sbjct: 1381 tcattatgcatattcagacagaaggcaattctcgagttaaaagcaatttgaggctcattt 1322 Query: 316 gttgagtagacatcaccagtttctttcgacaccatccagccatttgcatggtctatggtg 375 || ||||||| |||||||| || || || |||||||| ||||| ||||| || | || Sbjct: 1321 gtagagtagatgtcaccagtctcctttgataccatccatccattcgcatgatccaacgtc 1262 Query: 376 gcatcaatagcaccatctcttatggccttggctacaatgcactccgcatcggcaacagga 435 |||||||| |||||||||| || || |||| || || | ||| ||||| |||||||| Sbjct: 1261 gcatcaattgcaccatctcgaattgctttggacacgatactctcagcatcagcaacaggg 1202 Query: 436 ttcccagtgtctagccttagcttcttcgcaatatcagcaagggagatccgcgagtatgaa 495 || || || | ||| ||||| || |||| |||| | || ||||| || |||||||| Sbjct: 1201 tttggagaatccaacctcagcttttttgcaacatcaaccagcgagattcgagagtatgag 1142 Query: 496 atgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcacaatcaaattg 555 || |||||||| ||||| ||||| | ||||||||| || ||||| ||||||||||||||| Sbjct: 1141 atactgatgtttcgtagcccagtcctaatgacattatgtcggagtctcacaatcaaattg 1082 Query: 556 t 556 | Sbjct: 1081 t 1081
>ref|NM_106248.2| Arabidopsis thaliana unknown protein AT1G75990 mRNA, complete cds Length = 1646 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 1158 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 1099 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 1098 atgaggttgtgagtcctgtct 1078 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Minus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 1395 accgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggt 1336 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 1335 tcattagtggagtaga 1320
>gb|BT015771.1| Arabidopsis thaliana At1g75990 mRNA, complete cds Length = 1464 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 1100 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 1041 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 1040 atgaggttgtgagtcctgtct 1020 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Minus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 1337 accgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggt 1278 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 1277 tcattagtggagtaga 1262
>gb|AY057508.1| Arabidopsis thaliana At1g75990/T4O12_21 mRNA, complete cds Length = 1654 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 1158 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 1099 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 1098 atgaggttgtgagtcctgtct 1078 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Minus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 1395 accgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggt 1336 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 1335 tcattagtggagtaga 1320
>emb|BX814379.1|CNS0ADJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1247 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 832 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 773 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 772 atgaggttgtgagtcctgtct 752 Score = 40.1 bits (20), Expect = 8.2 Identities = 62/76 (81%) Strand = Plus / Minus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| |||| || |||| ||| ||| Sbjct: 1069 accgcttcattgtgcatattcaaacagaaggcaatcctcgagtaaaacgcagtctgtggt 1010 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 1009 tcattagtggagtaga 994
>emb|BX817112.1|CNS0AAOL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 1139 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 1080 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 1079 atgaggttgtgagtcctgtct 1059 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Minus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 1376 accgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggt 1317 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 1316 tcattagtggagtaga 1301
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 487 gagtatgaaatgctgatgttgcgtagtccagttcgaatgacattgtggcggagcctcaca 546 ||||| ||||||||||||||||| ||||| |||| || || ||||| ||||| || || Sbjct: 74058 gagtaggaaatgctgatgttgcgcagtcctgttctgatcacgttgtgtcggagtctgact 74117 Query: 547 atcaaattgtgagtcctgtct 567 || | ||||||||||||||| Sbjct: 74118 atgaggttgtgagtcctgtct 74138 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Plus Query: 250 accgcttcattatgcatgttgaggcagaacgcaatcctggagttgaatgcagcctggggt 309 ||||||||||| ||||| || | ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 73821 accgcttcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtggt 73880 Query: 310 tcatttgttgagtaga 325 ||||| || ||||||| Sbjct: 73881 tcattagtggagtaga 73896
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gctggagcctttctcggcgcttctca 201 ||||||||| |||||||||||||||| Sbjct: 153842 gctggagcccttctcggcgcttctca 153867
>ref|XM_505989.1| Yarrowia lipolytica CLIB122, YALI0F28413g predicted mRNA Length = 1422 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 370 atggtggcatcaatagcaccatctcttatggccttggctacaatgcactc 419 |||||||| ||||| ||||||||| ||||||||||| |||||| |||| Sbjct: 1160 atggtggcttcaatgacaccatctcgaatggccttggccacaatgtactc 1111
>emb|AL358972.13| Human DNA sequence from clone RP11-347L18 on chromosome 6 Contains a novel gene, complete sequence Length = 172606 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 tgagaattcgggggaaacctca 241 |||||||||||||||||||||| Sbjct: 74627 tgagaattcgggggaaacctca 74606
>emb|BX020452.1|CNS08NY0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30AE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 131 catcgtcatcctcctcagccatgtgctttgccagctct 168 |||||||||||||||| ||||| | ||| ||||||||| Sbjct: 190 catcgtcatcctcctcggccatctccttcgccagctct 227
>emb|BX010298.1|CNS08G3Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 818 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 131 catcgtcatcctcctcagccatgtgctttgccagctct 168 |||||||||||||||| ||||| | ||| ||||||||| Sbjct: 209 catcgtcatcctcctcggccatctccttcgccagctct 246
>gb|AC055739.23| Homo sapiens 3 BAC RP11-197K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136000 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 ggcatcaatagcaccatctctt 396 |||||||||||||||||||||| Sbjct: 9583 ggcatcaatagcaccatctctt 9562
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 gctggagcctttctcggcgcttctca 201 ||||||||| |||||||||||||||| Sbjct: 81197 gctggagcccttctcggcgcttctca 81172
>ref|XM_319831.2| Anopheles gambiae str. PEST ENSANGP00000016528 (ENSANGG00000014039), partial mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 131 catcgtcatcctcctcagccatgtgctttgccagctct 168 |||||||||||||||| ||||| | ||| ||||||||| Sbjct: 1483 catcgtcatcctcctcggccatctccttcgccagctct 1446
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gctggagcctttctcggcgcttctca 201 ||||||||| |||||||||||||||| Sbjct: 252507 gctggagcccttctcggcgcttctca 252532
>gb|AF042732.1|AF042732 Anopheles gambiae (Bb) gene, partial cds; and TU37B2 (TU37B2) and diphenol oxidase-A2 (Dox-A2) genes, complete cds Length = 4206 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 131 catcgtcatcctcctcagccatgtgctttgccagctct 168 |||||||||||||||| ||||| | ||| ||||||||| Sbjct: 3582 catcgtcatcctcctcggccatctccttcgccagctct 3545
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 370 atggtggcatcaatagcaccatctcttatggccttggctacaatgcactc 419 |||||||| ||||| ||||||||| ||||||||||| |||||| |||| Sbjct: 3615189 atggtggcttcaatgacaccatctcgaatggccttggccacaatgtactc 3615140
>ref|NM_001031362.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (PSMD3), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 atggccttggctacaatgcactccgcatc 425 ||||||||||| |||||| |||||||||| Sbjct: 1305 atggccttggcaacaatgaactccgcatc 1277
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 cctggagttgaatgcagcctg 305 ||||||||||||||||||||| Sbjct: 109561 cctggagttgaatgcagcctg 109541
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 caacaggattcccagtgtctagcct 452 ||||||||||||||||| ||||||| Sbjct: 190057 caacaggattcccagtgactagcct 190081
>gb|AY166689.1| Eubacterium acidaminophilum molybdenum-pterin-binging protein (mop) and putative permease protein genes, complete cds; and unknown genes Length = 4748 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ctttgccagctcttcctcctg 176 ||||||||||||||||||||| Sbjct: 54 ctttgccagctcttcctcctg 34
>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence Length = 116833 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gatctaaaatcaacaattcaa 109 ||||||||||||||||||||| Sbjct: 88004 gatctaaaatcaacaattcaa 88024
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 129 atcatcgtcatcctcctcagccatgtgctttgccagctcttcctcctgctggagcctttc 188 |||||| ||||| ||||| | || ||||||||||| |||| ||| ||||| |||| || Sbjct: 3103 atcatcatcatcttcctcctcaatatgctttgccagttcttgctcttgctgttgcctctc 3044 Query: 189 tcggcgcttctcagcgctctccttctccttgtg 221 || ||||||||||| | || ||||||||||| Sbjct: 3043 tctccgcttctcagcaatttctttctccttgtg 3011 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 310 tcatttgttgagtagacatcaccagtttctttcgacaccatccagccatttgcatg 365 |||||||| ||||| | ||| ||| |||| || ||||||||||| ||||| ||||| Sbjct: 2922 tcatttgtagagtaaatatctccaatttccttggacaccatccatccattagcatg 2867
>emb|AJ719445.1| Gallus gallus mRNA for hypothetical protein, clone 2h4 Length = 2025 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 atggccttggctacaatgcactccgcatc 425 ||||||||||| |||||| |||||||||| Sbjct: 1305 atggccttggcaacaatgaactccgcatc 1277
>emb|CR318628.8| Zebrafish DNA sequence from clone DKEY-148N22 in linkage group 19, complete sequence Length = 115655 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 taaaatcaacaattcaaaaaa 113 ||||||||||||||||||||| Sbjct: 110351 taaaatcaacaattcaaaaaa 110331
>ref|XM_511464.1| PREDICTED: Pan troglodytes similar to 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome regulatory subunit S3) (Proteasome subunit p58) (LOC454640), mRNA Length = 1990 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1875 ggaaacctcatggccttgac 1856
>gb|AF148647.1| Homo sapiens 1;17 constitutional breakpoint genomic sequence Length = 51050 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gctcttcctcctgctggagc 183 |||||||||||||||||||| Sbjct: 44040 gctcttcctcctgctggagc 44021
>ref|XM_581134.2| PREDICTED: Bos taurus similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (predicted), transcript variant 1 (LOC504937), mRNA Length = 917 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 433 ggaaacctcatggccttgac 414
>ref|XM_869953.1| PREDICTED: Bos taurus similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (predicted), transcript variant 2 (LOC504937), mRNA Length = 2244 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1760 ggaaacctcatggccttgac 1741
>ref|XM_590055.2| PREDICTED: Bos taurus similar to forkhead-associated (FHA) phosphopeptide binding domain 1 (LOC512520), mRNA Length = 3285 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tcctcctgctggagcctttc 188 |||||||||||||||||||| Sbjct: 2642 tcctcctgctggagcctttc 2623
>gb|BC025686.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:36769 IMAGE:5205360), complete cds Length = 2111 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1591 ggaaacctcatggccttgac 1572
>gb|BC012302.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:9893 IMAGE:3868681), complete cds Length = 2149 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1641 ggaaacctcatggccttgac 1622
>gb|BC004859.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:10382 IMAGE:3832823), complete cds Length = 2074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1555 ggaaacctcatggccttgac 1536
>gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, complete sequence Length = 245784 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 taaaaagtttacaagattca 53 |||||||||||||||||||| Sbjct: 170319 taaaaagtttacaagattca 170300
>ref|XM_749587.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09390) partial mRNA Length = 1035 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 atcatcgtcatcctcctcag 148 |||||||||||||||||||| Sbjct: 171 atcatcgtcatcctcctcag 152
>emb|BX547934.18| Zebrafish DNA sequence from clone DKEY-161J23 in linkage group 24, complete sequence Length = 174457 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 acaatcaaattgtgagtcct 563 |||||||||||||||||||| Sbjct: 81853 acaatcaaattgtgagtcct 81872
>ref|XM_548138.2| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome regulatory subunit S3) (Proteasome subunit p58) (LOC491018), mRNA Length = 2148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1660 ggaaacctcatggccttgac 1641
>emb|AL592308.3| Human DNA sequence from clone RP13-610P22 on chromosome 1, complete sequence Length = 170581 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaaatcaacaattcaaaaaa 113 |||||||||||||||||||| Sbjct: 56046 aaaatcaacaattcaaaaaa 56027
>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete sequence Length = 160587 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 atagcaccatctcttatggc 401 |||||||||||||||||||| Sbjct: 4544 atagcaccatctcttatggc 4525
>emb|AL133297.1| Human DNA sequence from clone LA16c-425C2 on chromosome 16 Contains gene for KIAA0590 protein, ESTs, STSs, GSSs, complete sequence Length = 27084 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gctttgccagctcttcctcc 174 |||||||||||||||||||| Sbjct: 26534 gctttgccagctcttcctcc 26515
>gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122934 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagtttacaagattcaaac 56 |||||||||||||||||||| Sbjct: 112489 aaagtttacaagattcaaac 112508
>ref|XM_794969.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC579981 (LOC579981), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aatcatcgtcatcctcctca 147 |||||||||||||||||||| Sbjct: 781 aatcatcgtcatcctcctca 762
>gb|BT007868.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 mRNA, partial cds Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>gb|BT007217.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 mRNA, complete cds Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gctttgccagctcttcctcc 174 |||||||||||||||||||| Sbjct: 275459 gctttgccagctcttcctcc 275440
>emb|BX663515.13| Zebrafish DNA sequence from clone DKEY-228G21 in linkage group 23, complete sequence Length = 224215 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cagctcttcctcctgctggagcct 185 ||||| |||||||||||||||||| Sbjct: 46527 cagctgttcctcctgctggagcct 46504
>emb|CR611998.1| full-length cDNA clone CS0DN004YD09 of Adult brain of Homo sapiens (human) Length = 2102 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1642 ggaaacctcatggccttgac 1623
>dbj|AK094206.1| Homo sapiens cDNA FLJ36887 fis, clone BNGH42005504, highly similar to 26S PROTEASOME REGULATORY SUBUNIT S3 Length = 2108 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1615 ggaaacctcatggccttgac 1596
>emb|CR603532.1| full-length cDNA clone CS0DI008YL16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1868 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1413 ggaaacctcatggccttgac 1394
>dbj|AK055799.1| Homo sapiens cDNA FLJ31237 fis, clone KIDNE2004846, highly similar to 26S PROTEASOME REGULATORY SUBUNIT S3 Length = 2067 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1574 ggaaacctcatggccttgac 1555
>dbj|AK054611.1| Homo sapiens cDNA FLJ30049 fis, clone ADRGL1000033, highly similar to 26S PROTEASOME REGULATORY SUBUNIT S3 Length = 2130 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1637 ggaaacctcatggccttgac 1618
>dbj|AK022896.1| Homo sapiens cDNA FLJ12834 fis, clone NT2RP2003158, highly similar to Homo sapiens mRNA for proteasome subunit p58 Length = 2097 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1604 ggaaacctcatggccttgac 1585
>gb|AF107548.1| Brassica napus disease resistance-like protein (RGA-4) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cttagcttcttcgcaatatc 470 |||||||||||||||||||| Sbjct: 126 cttagcttcttcgcaatatc 107
>ref|NM_002809.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (PSMD3), mRNA Length = 2174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1654 ggaaacctcatggccttgac 1635
>emb|CR456772.1| Homo sapiens full open reading frame cDNA clone RZPDo834E034D for gene PSMD3, proteasome (prosome, macropain) 26S subunit, non-ATPase, 3; complete cds, incl. stopcodon Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>emb|BX571968.10| Zebrafish DNA sequence from clone DKEY-27C4 in linkage group 23, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cagctcttcctcctgctggagcct 185 ||||| |||||||||||||||||| Sbjct: 107019 cagctgttcctcctgctggagcct 106996
>dbj|AB169643.1| Macaca fascicularis brain cDNA, clone: QccE-10657, similar to human proteasome (prosome, macropain) 26S subunit, non-ATPase,3 (PSMD3), mRNA, RefSeq: NM_002809.2 Length = 2160 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1656 ggaaacctcatggccttgac 1637
>ref|XM_628179.1| Cryptosporidium parvum Iowa II CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) (cgd1_3670), partial mRNA Length = 6168 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 aattacagaagatgtaaaaa 39 |||||||||||||||||||| Sbjct: 1380 aattacagaagatgtaaaaa 1399
>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete sequence Length = 224155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tagaattacagaagatgtaa 36 |||||||||||||||||||| Sbjct: 58685 tagaattacagaagatgtaa 58704
>gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosome 12, complete sequence Length = 155161 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 taaaatcaacaattcaaaaa 112 |||||||||||||||||||| Sbjct: 105173 taaaatcaacaattcaaaaa 105192
>gb|BC105526.1| Bos taurus cDNA clone MGC:129041 IMAGE:8121362, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1633 ggaaacctcatggccttgac 1614
>gb|AC024614.5|AC024614 Homo sapiens chromosome 17, clone RP11-118G23, complete sequence Length = 158560 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gctcttcctcctgctggagc 183 |||||||||||||||||||| Sbjct: 119069 gctcttcctcctgctggagc 119088
>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I, complete sequence Length = 106142 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tctccttctccttgtgagaa 225 |||||||||||||||||||| Sbjct: 62983 tctccttctccttgtgagaa 63002
>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence Length = 193973 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aattacagaagatgtaaaaa 39 |||||||||||||||||||| Sbjct: 94981 aattacagaagatgtaaaaa 94962
>ref|XM_225445.3| PREDICTED: Rattus norvegicus similar to elicitor-like mating protein M81 (LOC307026), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gtcctgtctgcactgaatgt 578 |||||||||||||||||||| Sbjct: 149 gtcctgtctgcactgaatgt 168
>ref|XM_214199.3| PREDICTED: Rattus norvegicus importin 4 (predicted) (Ipo4_predicted), mRNA Length = 3460 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcatcgtcatcctcctcagc 149 |||||||||||||||||||| Sbjct: 2483 tcatcgtcatcctcctcagc 2464
>ref|XM_215184.3| PREDICTED: Rattus norvegicus inner centromere protein antigens 135/155kDa (predicted) (Incenp_predicted), mRNA Length = 3243 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ctcttcctcctgctggagcc 184 |||||||||||||||||||| Sbjct: 2472 ctcttcctcctgctggagcc 2453
>gb|AY891635.1| Synthetic construct Homo sapiens clone FLH025426.01L proteasome 26S subunit 3 (PSMD3) mRNA, partial cds Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>gb|AY889051.1| Synthetic construct Homo sapiens clone FLH025429.01X proteasome (PSMD3) mRNA, complete cds Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>gb|AY889050.1| Synthetic construct Homo sapiens clone FLH025428.01X proteasome 26S subunit 3 (PSMD3) mRNA, complete cds Length = 1605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1490 ggaaacctcatggccttgac 1471
>gb|BC020518.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:17853 IMAGE:3901555), complete cds Length = 2135 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1591 ggaaacctcatggccttgac 1572
>gb|AC109281.5| Mus musculus chromosome 3, clone RP24-66E21, complete sequence Length = 222162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 taaaaagtttacaagattca 53 |||||||||||||||||||| Sbjct: 216091 taaaaagtttacaagattca 216110
>gb|AF091075.1|AF091075 Homo sapiens clone 308 proteasome subunit p58 mRNA, complete cds Length = 915 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 402 ggaaacctcatggccttgac 383
>gb|BC000074.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:1661 IMAGE:3505074), complete cds Length = 2108 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1593 ggaaacctcatggccttgac 1574
>gb|U35458.1|MAU35458 Methanococcus aeolicus acetohydroxyacid synthase large subunit (ilvB) and acetohydroxyacid synthase small subunit (ilvN) genes, complete cds Length = 3527 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 atagaattacagaagatgtaaaaagttt 43 |||||||||||| |||| |||||||||| Sbjct: 1770 atagaattacaggagatataaaaagttt 1797
>gb|M25581.1|DDIACTIN4A Dictyostelium discoideum actin 4 gene, 3' UTR Length = 223 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 atctaaaatcaacaattcaaaaaa 113 ||||||||| |||||||||||||| Sbjct: 139 atctaaaataaacaattcaaaaaa 162
>gb|K02957.1|DDIACT42 Slime mold (D.discoideum) actin 4 gene, 3' end Length = 223 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 atctaaaatcaacaattcaaaaaa 113 ||||||||| |||||||||||||| Sbjct: 139 atctaaaataaacaattcaaaaaa 162
>dbj|D67025.1| Homo sapiens mRNA for proteasome subunit p58, complete cds Length = 2177 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggaaacctcatggccttgac 251 |||||||||||||||||||| Sbjct: 1647 ggaaacctcatggccttgac 1628
>dbj|AB030754.1| Mus musculus prkdc gene for DNA-dependent protein kinase catalytic subunit, complete cds Length = 193650 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tagaattacagaagatgtaa 36 |||||||||||||||||||| Sbjct: 190072 tagaattacagaagatgtaa 190091 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,820,468 Number of Sequences: 3902068 Number of extensions: 5820468 Number of successful extensions: 122915 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122631 Number of HSP's gapped (non-prelim): 269 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
