| Clone Name | rbags29a16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 285 bits (144), Expect = 9e-74 Identities = 300/352 (85%) Strand = Plus / Minus Query: 312 cctcttatgctggtctcgacgcggaaggtcgacgaaaggattctgaagagcccgtcaggg 371 ||||||||| | | ||||| ||||||||| || || || ||||| || ||||| |||||| Sbjct: 920 cctcttatggtagcctcgatgcggaaggttgatgagagaattctaaatagcccatcaggg 861 Query: 372 ttatctgcgtgaacccagtgtccagcatcttcaagcacatgcatttcaactcctccggcc 431 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 860 ttatctgcatgaacccaatgtccagcatcttcaagcacgtgcatttcaactcctccaccc 801 Query: 432 tcatctgcggccacctcctctgcagcatgaattctctgaaggtcttcaagggcccatcta 491 |||||||| |||| ||||| |||| |||||||||||| || || ||||| ||||||||| Sbjct: 800 tcatctgcagccagttcctcagcagtatgaattctctggagatcatcaagagcccatcta 741 Query: 492 tgcaaacttctttcggccttgagaaaattaatgtgtactcctcgtggtacgttctctaca 551 |||||||||||||| || || || |||||||| || || || | |||||| ||||||||| Sbjct: 740 tgcaaacttctttcagctttaaggaaattaatatgaacaccccttggtacattctctaca 681 Query: 552 atcctccataggttagtatcttcatatgacttgtacatctcagagatgccatttaagtcg 611 |||| ||||| |||||| |||||||| ||||||||||| ||||| |||||||||| ||| Sbjct: 680 atcccccataagttagtctcttcataggacttgtacatgtcagatatgccatttaggtca 621 Query: 612 aatatccatgagaagcttggagaagatcgtggtcctgatgggctgctccgtc 663 || |||||||||||||||| ||| ||| ||| ||| |||| ||||| |||| Sbjct: 620 aaaatccatgagaagcttgaagacgatagtgaccctaatggactgcttcgtc 569
>dbj|AK059523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C09, full insert sequence Length = 1515 Score = 285 bits (144), Expect = 9e-74 Identities = 300/352 (85%) Strand = Plus / Minus Query: 312 cctcttatgctggtctcgacgcggaaggtcgacgaaaggattctgaagagcccgtcaggg 371 ||||||||| | | ||||| ||||||||| || || || ||||| || ||||| |||||| Sbjct: 1240 cctcttatggtagcctcgatgcggaaggttgatgagagaattctaaatagcccatcaggg 1181 Query: 372 ttatctgcgtgaacccagtgtccagcatcttcaagcacatgcatttcaactcctccggcc 431 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 1180 ttatctgcatgaacccaatgtccagcatcttcaagcacgtgcatttcaactcctccaccc 1121 Query: 432 tcatctgcggccacctcctctgcagcatgaattctctgaaggtcttcaagggcccatcta 491 |||||||| |||| ||||| |||| |||||||||||| || || ||||| ||||||||| Sbjct: 1120 tcatctgcagccagttcctcagcagtatgaattctctggagatcatcaagagcccatcta 1061 Query: 492 tgcaaacttctttcggccttgagaaaattaatgtgtactcctcgtggtacgttctctaca 551 |||||||||||||| || || || |||||||| || || || | |||||| ||||||||| Sbjct: 1060 tgcaaacttctttcagctttaaggaaattaatatgaacaccccttggtacattctctaca 1001 Query: 552 atcctccataggttagtatcttcatatgacttgtacatctcagagatgccatttaagtcg 611 |||| ||||| |||||| |||||||| ||||||||||| ||||| |||||||||| ||| Sbjct: 1000 atcccccataagttagtctcttcataggacttgtacatgtcagatatgccatttaggtca 941 Query: 612 aatatccatgagaagcttggagaagatcgtggtcctgatgggctgctccgtc 663 || |||||||||||||||| ||| ||| ||| ||| |||| ||||| |||| Sbjct: 940 aaaatccatgagaagcttgaagacgatagtgaccctaatggactgcttcgtc 889
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 384 acccagtgtccagcatcttcaagcacatgcatttcaactcctccggcctcatctgcggcc 443 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 38473348 acccaatgtccagcatcttcaagcacgtgcatttcaactcctccaccctcatctgcagcc 38473289 Query: 444 acctcctctgcagcatgaattctctgaaggtcttcaagggcccatctatgcaaacttctt 503 | ||||| |||| |||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 38473288 agttcctcagcagtatgaattctctggagatcatcaagagcccatctatgcaaacttctt 38473229 Query: 504 tcggccttgagaaaattaatgtgtactcctcgtggtacgttctctacaatcc 555 || || || || |||||||| || || || | |||||| ||||||||||||| Sbjct: 38473228 tcagctttaaggaaattaatatgaacaccccttggtacattctctacaatcc 38473177 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 557 ccataggttagtatcttcatatgacttgtacatctcagagatgccatttaagtcgaatat 616 ||||| |||||| |||||||| ||||||||||| ||||| |||||||||| ||| || || Sbjct: 38473085 ccataagttagtctcttcataggacttgtacatgtcagatatgccatttaggtcaaaaat 38473026 Query: 617 ccatgagaagcttggagaagatcgtggtcctgatgggctgctccgtc 663 |||||||||||||| ||| ||| ||| ||| |||| ||||| |||| Sbjct: 38473025 ccatgagaagcttgaagacgatagtgaccctaatggactgcttcgtc 38472979 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 312 cctcttatgctggtctcgacgcggaaggtcgacgaaaggattctgaagagcccgtcaggg 371 ||||||||| | | ||||| ||||||||| || || || ||||| || ||||| |||||| Sbjct: 38473661 cctcttatggtagcctcgatgcggaaggttgatgagagaattctaaatagcccatcaggg 38473602 Query: 372 ttatctgcgtgaacc 386 |||||||| |||||| Sbjct: 38473601 ttatctgcatgaacc 38473587
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 384 acccagtgtccagcatcttcaagcacatgcatttcaactcctccggcctcatctgcggcc 443 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 66445 acccaatgtccagcatcttcaagcacgtgcatttcaactcctccaccctcatctgcagcc 66386 Query: 444 acctcctctgcagcatgaattctctgaaggtcttcaagggcccatctatgcaaacttctt 503 | ||||| |||| |||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 66385 agttcctcagcagtatgaattctctggagatcatcaagagcccatctatgcaaacttctt 66326 Query: 504 tcggccttgagaaaattaatgtgtactcctcgtggtacgttctctacaatcc 555 || || || || |||||||| || || || | |||||| ||||||||||||| Sbjct: 66325 tcagctttaaggaaattaatatgaacaccccttggtacattctctacaatcc 66274 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 557 ccataggttagtatcttcatatgacttgtacatctcagagatgccatttaagtcgaatat 616 ||||| |||||| |||||||| ||||||||||| ||||| |||||||||| ||| || || Sbjct: 66182 ccataagttagtctcttcataggacttgtacatgtcagatatgccatttaggtcaaaaat 66123 Query: 617 ccatgagaagcttggagaagatcgtggtcctgatgggctgctccgtc 663 |||||||||||||| ||| ||| ||| ||| |||| ||||| |||| Sbjct: 66122 ccatgagaagcttgaagacgatagtgaccctaatggactgcttcgtc 66076 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 312 cctcttatgctggtctcgacgcggaaggtcgacgaaaggattctgaagagcccgtcaggg 371 ||||||||| | | ||||| ||||||||| || || || ||||| || ||||| |||||| Sbjct: 66758 cctcttatggtagcctcgatgcggaaggttgatgagagaattctaaatagcccatcaggg 66699 Query: 372 ttatctgcgtgaacc 386 |||||||| |||||| Sbjct: 66698 ttatctgcatgaacc 66684
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 384 acccagtgtccagcatcttcaagcacatgcatttcaactcctccggcctcatctgcggcc 443 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 58763 acccaatgtccagcatcttcaagcacgtgcatttcaactcctccaccctcatctgcagcc 58704 Query: 444 acctcctctgcagcatgaattctctgaaggtcttcaagggcccatctatgcaaacttctt 503 | ||||| |||| |||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 58703 agttcctcagcagtatgaattctctggagatcatcaagagcccatctatgcaaacttctt 58644 Query: 504 tcggccttgagaaaattaatgtgtactcctcgtggtacgttctctacaatcc 555 || || || || |||||||| || || || | |||||| ||||||||||||| Sbjct: 58643 tcagctttaaggaaattaatatgaacaccccttggtacattctctacaatcc 58592 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 557 ccataggttagtatcttcatatgacttgtacatctcagagatgccatttaagtcgaatat 616 ||||| |||||| |||||||| ||||||||||| ||||| |||||||||| ||| || || Sbjct: 58500 ccataagttagtctcttcataggacttgtacatgtcagatatgccatttaggtcaaaaat 58441 Query: 617 ccatgagaagcttggagaagatcgtggtcctgatgggctgctccgtc 663 |||||||||||||| ||| ||| ||| ||| |||| ||||| |||| Sbjct: 58440 ccatgagaagcttgaagacgatagtgaccctaatggactgcttcgtc 58394 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 312 cctcttatgctggtctcgacgcggaaggtcgacgaaaggattctgaagagcccgtcaggg 371 ||||||||| | | ||||| ||||||||| || || || ||||| || ||||| |||||| Sbjct: 59076 cctcttatggtagcctcgatgcggaaggttgatgagagaattctaaatagcccatcaggg 59017 Query: 372 ttatctgcgtgaacc 386 |||||||| |||||| Sbjct: 59016 ttatctgcatgaacc 59002
>emb|BX829022.1|CNS0A3DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 65.9 bits (33), Expect = 2e-07 Identities = 144/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1178 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1119 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || ||||| || |||| ||||||| Sbjct: 1118 atttctacaccaccgccttcttcagaggctagctcttcagcagcgtggattcgctgaagg 1059 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1058 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 999 Query: 534 c 534 | Sbjct: 998 c 998
>ref|NM_117071.3| Arabidopsis thaliana catalytic/ hydrolase AT4G10030 mRNA, complete cds Length = 1985 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1248 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1189 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1188 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1129 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1128 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1069 Query: 534 c 534 | Sbjct: 1068 c 1068
>emb|BX827740.1|CNS0A3XZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1243 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1184 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1183 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1124 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1123 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1064 Query: 534 c 534 | Sbjct: 1063 c 1063
>emb|BX827654.1|CNS0A3QB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1184 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1125 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1124 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1065 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1064 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1005 Query: 534 c 534 | Sbjct: 1004 c 1004
>emb|BX827437.1|CNS0A3LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1443 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1244 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1185 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1184 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1125 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1124 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1065 Query: 534 c 534 | Sbjct: 1064 c 1064
>emb|BX827185.1|CNS0A3NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1187 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1128 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1127 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1068 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1067 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1008 Query: 534 c 534 | Sbjct: 1007 c 1007
>gb|AY088446.1| Arabidopsis thaliana clone 6718 mRNA, complete sequence Length = 1518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1234 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1175 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1174 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1115 Query: 474 tcttcaagggcccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcct 533 ||||| |||||||| | ||||| |||||||| || || |||||||| | ||||||||| Sbjct: 1114 tcttctagggcccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcct 1055 Query: 534 c 534 | Sbjct: 1054 c 1054
>gb|BT013409.1| Lycopersicon esculentum clone 135726F, mRNA sequence Length = 1640 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Minus Query: 345 gaaaggattctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttca 404 |||||||| |||| ||||| || |||||||| || || ||||| || || |||||||| Sbjct: 1272 gaaaggatcttgaatagcccatctgggttatcagcatgtacccaatgacctgcatcttcg 1213 Query: 405 agcacatgcatttcaactcctccggcctcatctgcggccacctcctctgcagcatgaatt 464 || ||||||||||| ||||| || | || ||| | ||| ||||| ||| |||| ||| Sbjct: 1212 aggacatgcatttcgactccacctccttcctctacagcctgttcctcagcaacatggatt 1153 Query: 465 ctctgaaggtcttcaagggcccatctatgcaaacttctttc 505 || || || ||||| ||||||||||||||||||||||| Sbjct: 1152 cttctaatatcctcaagagcccatctatgcaaacttctttc 1112
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28 Length = 198005 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 462 attctctgaaggtcttcaagggcccatctatgcaaacttctttcggccttgagaaaatta 521 |||| |||||||||||| |||||||| | ||||| |||||||| || || |||||||| Sbjct: 95966 attcgctgaaggtcttctagggcccaacggtgcaagcttctttccgctttcagaaaattc 96025 Query: 522 atgtgtactcctc 534 | |||||||||| Sbjct: 96026 acatgtactcctc 96038
>emb|AL049481.1|ATT5L19 Arabidopsis thaliana DNA chromosome 4, BAC clone T5L19 (ESSA project) Length = 92495 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 462 attctctgaaggtcttcaagggcccatctatgcaaacttctttcggccttgagaaaatta 521 |||| |||||||||||| |||||||| | ||||| |||||||| || || |||||||| Sbjct: 56538 attcgctgaaggtcttctagggcccaacggtgcaagcttctttccgctttcagaaaattc 56597 Query: 522 atgtgtactcctc 534 | |||||||||| Sbjct: 56598 acatgtactcctc 56610
>emb|BX826349.1|CNS0A43B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 462 attctctgaaggtcttcaagggcccatctatgcaaacttctttcggccttgagaaaatta 521 |||| |||||||||||| |||||||| | ||||| |||||||| || || |||||||| Sbjct: 1063 attcgctgaaggtcttctagggcccaacggtgcaagcttctttccgctttcagaaaattc 1004 Query: 522 atgtgtactcctc 534 | |||||||||| Sbjct: 1003 acatgtactcctc 991
>emb|BX826311.1|CNS0A3ZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1132 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 462 attctctgaaggtcttcaagggcccatctatgcaaacttctttcggccttgagaaaatta 521 |||| |||||||||||| |||||||| | ||||| |||||||| || || |||||||| Sbjct: 862 attcgctgaaggtcttctagggcccaacggtgcaagcttctttccgctttcagaaaattc 803 Query: 522 atgtgtactcctc 534 | |||||||||| Sbjct: 802 acatgtactcctc 790
>emb|BX537286.4| Zebrafish DNA sequence from clone DKEY-28J4 in linkage group 4, complete sequence Length = 179930 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 97 atggaagaaacgaatgaatgaac 119 ||||||||||||||||||||||| Sbjct: 36578 atggaagaaacgaatgaatgaac 36600
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 tgtgcctctcttttgtaattctacaa 196 |||||||| ||||||||||||||||| Sbjct: 35259996 tgtgcctcacttttgtaattctacaa 35260021
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 tgtgcctctcttttgtaattctacaa 196 |||||||| ||||||||||||||||| Sbjct: 138757 tgtgcctcacttttgtaattctacaa 138782
>gb|AY954920.1| Choristoneura fumiferana putative farnesyl diphosphate synthase mRNA, complete cds Length = 1519 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 621 gagaagcttggagaagatcgtg 642 |||||||||||||||||||||| Sbjct: 137 gagaagcttggagaagatcgtg 158
>gb|AY962308.1|AY962308S1 Choristoneura fumiferana putative farnesyl diphosphate synthase (FPPS-1) gene, exons 1 through 4 Length = 7959 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 621 gagaagcttggagaagatcgtg 642 |||||||||||||||||||||| Sbjct: 15 gagaagcttggagaagatcgtg 36
>emb|BX119930.5| Zebrafish DNA sequence from clone DKEY-18G4 in linkage group 3, complete sequence Length = 186318 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 atggaagaaacgaatgaatgaa 118 |||||||||||||||||||||| Sbjct: 146706 atggaagaaacgaatgaatgaa 146685
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 tgtgcctctcttttgtaattctacaa 196 |||||||| ||||||||||||||||| Sbjct: 35350068 tgtgcctcacttttgtaattctacaa 35350093
>emb|BX828163.1|CNS0A3UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 44.1 bits (22), Expect = 0.58 Identities = 143/182 (78%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 354 ctgaagagcccgtcagggttatctgcgtgaacccagtgtccagcatcttcaagcacatgc 413 |||||||| || || |||||||| | ||||||||| || || |||||||| | |||||| Sbjct: 1210 ctgaagagaccatccgggttatccgtgtgaacccaatgaccggcatcttccaagacatgc 1151 Query: 414 atttcaactcctccggcctcatctgcggccacctcctctgcagcatgaattctctgaagg 473 ||||| || || ||| | || || | ||| | ||| || || || || |||| ||||||| Sbjct: 1150 atttctacaccaccgccttcttcagaggctagctcttcagcggcgtggattcgctgaagg 1091 Query: 474 tcttcaaggg-cccatctatgcaaacttctttcggccttgagaaaattaatgtgtactcc 532 ||||| |||| |||| | ||||| |||||||| || || |||||||| | |||||||| Sbjct: 1090 tcttctagggccccaacggtgcaagcttctttccgctttcagaaaattcacatgtactcc 1031 Query: 533 tc 534 || Sbjct: 1030 tc 1029
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 tgtgcctctcttttgtaattctacaa 196 |||||||| ||||||||||||||||| Sbjct: 108458 tgtgcctcacttttgtaattctacaa 108433
>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete sequence Length = 211336 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 166824 aaacgaatgaatgaacgaatg 166844
>gb|AC008074.3| Homo sapiens BAC clone RP11-568N6 from 2, complete sequence Length = 198087 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ctcttttgtaattctacaaaa 198 ||||||||||||||||||||| Sbjct: 29385 ctcttttgtaattctacaaaa 29405
>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 220225 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 187113 aaacgaatgaatgaacgaatg 187133
>gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortholog 8p23.1, complete sequence Length = 174987 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gaagaaacgaatgaatgaacgaatg 124 ||||||| ||||||||||||||||| Sbjct: 73913 gaagaaatgaatgaatgaacgaatg 73937
>gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human ortholog 8p23.1, complete sequence Length = 153308 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gaagaaacgaatgaatgaacgaatg 124 ||||||| ||||||||||||||||| Sbjct: 59346 gaagaaatgaatgaatgaacgaatg 59370
>gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholog 8p23.1, complete sequence Length = 190509 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gaagaaacgaatgaatgaacgaatg 124 ||||||| ||||||||||||||||| Sbjct: 92157 gaagaaatgaatgaatgaacgaatg 92181
>gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human ortholog 8p23.1, complete sequence Length = 200536 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gaagaaacgaatgaatgaacgaatg 124 ||||||| ||||||||||||||||| Sbjct: 106663 gaagaaatgaatgaatgaacgaatg 106687
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 496 aacttctttcggccttgagaaaatt 520 ||||||||| ||||||||||||||| Sbjct: 895491 aacttctttgggccttgagaaaatt 895515
>gb|AC104628.6| Drosophila melanogaster X BAC RP98-18C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187772 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 130916 aaacgaatgaatgaacgaatg 130896
>gb|AC023708.4| Drosophila melanogaster X BAC RP98-12B22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175355 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 33867 aaacgaatgaatgaacgaatg 33847
>gb|AC079141.7| Homo sapiens BAC clone RP11-502A23 from 4, complete sequence Length = 171273 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 cacatgcatttcaactcctcc 427 ||||||||||||||||||||| Sbjct: 164690 cacatgcatttcaactcctcc 164710
>emb|BX296517.6| Zebrafish DNA sequence from clone DKEYP-4E3 in linkage group 25, complete sequence Length = 110298 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 100835 aaacgaatgaatgaacgaatg 100815
>emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in linkage group 3, complete sequence Length = 155448 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 138196 aaacgaatgaatgaacgaatg 138216
>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence Length = 181971 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cactcccgtcctcttatgctg 323 ||||||||||||||||||||| Sbjct: 44184 cactcccgtcctcttatgctg 44204
>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence Length = 94001 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatgcacta 129 |||||||||||||||||||| |||| Sbjct: 12598 aacgaatgaatgaacgaatgaacta 12574
>gb|AC068630.21| Homo sapiens 3 BAC RP11-289N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164161 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 tggaagaaacgaatgaatgaa 118 ||||||||||||||||||||| Sbjct: 120806 tggaagaaacgaatgaatgaa 120786
>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19, complete sequence Length = 171679 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gaagaaacgaatgaatgaacgaatg 124 ||||||||||||||||| ||||||| Sbjct: 68976 gaagaaacgaatgaatggacgaatg 69000
>emb|AL953858.10| Zebrafish DNA sequence from clone CH211-121H11 in linkage group 19, complete sequence Length = 145746 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 387 aaacgaatgaatgaacgaatg 367 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 266 aaacgaatgaatgaacgaatg 246
>emb|BX248120.7| Zebrafish DNA sequence from clone CH211-160J6 in linkage group 18, complete sequence Length = 181815 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 145441 aaacgaatgaatgaacgaatg 145461
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 242912 aaacgaatgaatgaacgaatg 242892
>emb|BX004784.9| Zebrafish DNA sequence from clone DKEY-82I7 in linkage group 25, complete sequence Length = 160429 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 97345 aaacgaatgaatgaacgaatg 97365
>gb|AC112265.5| Mus musculus BAC clone RP23-421N20 from 10, complete sequence Length = 203204 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaatg 124 ||||||||||||||||||||| Sbjct: 93127 aaacgaatgaatgaacgaatg 93147
>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence Length = 183087 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 tccatgtgtattgttgttcatggc 247 ||||| |||||||||||||||||| Sbjct: 62959 tccatctgtattgttgttcatggc 62936
>ref|XM_512548.1| PREDICTED: Pan troglodytes zinc finger protein 208 (LOC455899), mRNA Length = 2645 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctctgcagcatgaattctct 468 |||||||||||||||||||| Sbjct: 2135 ctctgcagcatgaattctct 2116
>ref|XM_463876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2694 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cctccggcctcatctgcggc 442 |||||||||||||||||||| Sbjct: 2211 cctccggcctcatctgcggc 2230
>gb|AC102487.6| Mus musculus chromosome 5, clone RP24-496C22, complete sequence Length = 167936 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 57809 aacgaatgaatgaacgaatg 57828
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence Length = 174604 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ggaagaaacgaatgaatgaa 118 |||||||||||||||||||| Sbjct: 164619 ggaagaaacgaatgaatgaa 164638
>ref|XM_868013.1| PREDICTED: Bos taurus similar to RIKEN cDNA 4933403M22 (LOC616049), mRNA Length = 2129 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 376 ctgcgtgaacccagtgtccagcatcttc 403 |||||||| |||||||||||| |||||| Sbjct: 1527 ctgcgtgaccccagtgtccaggatcttc 1554
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gagcccgtcagggttatctg 378 |||||||||||||||||||| Sbjct: 1508529 gagcccgtcagggttatctg 1508510
>ref|NM_200131.1| Danio rerio zgc:55473 (zgc:55473), mRNA Length = 1692 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 agcccgtcagggttatctgcgtga 383 |||| ||||||||||||||||||| Sbjct: 664 agccggtcagggttatctgcgtga 687
>ref|NM_001001411.1| Homo sapiens zinc finger protein 676 (ZNF676), mRNA Length = 2091 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctctgcagcatgaattctct 468 |||||||||||||||||||| Sbjct: 887 ctctgcagcatgaattctct 868
>gb|AC123614.6| Mus musculus chromosome 9, clone RP23-446P16, complete sequence Length = 210060 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ggaagaaacgaatgaatgaa 118 |||||||||||||||||||| Sbjct: 203152 ggaagaaacgaatgaatgaa 203133
>emb|CR456621.10| Zebrafish DNA sequence from clone DKEY-37G16 in linkage group 14, complete sequence Length = 177017 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ggaagaaacgaatgaatgaacgaa 122 ||||| |||||||||||||||||| Sbjct: 174055 ggaaggaacgaatgaatgaacgaa 174078
>emb|CR382290.16| Zebrafish DNA sequence from clone CH211-236D22 in linkage group 1, complete sequence Length = 148582 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatgcactatc 131 ||||||||||||||| ||||| |||||| Sbjct: 102622 aaacgaatgaatgaatgaatgaactatc 102595
>emb|CR936461.6| Zebrafish DNA sequence from clone ZFOS-774F11 in linkage group 2, complete sequence Length = 28874 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 18727 aacgaatgaatgaacgaatg 18708
>gb|AC145195.2| Danio rerio clone CH211-160M5, complete sequence Length = 48040 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 ggaagaaacgaatgaatgaacgaa 122 ||||| |||||||||||||||||| Sbjct: 34683 ggaaggaacgaatgaatgaacgaa 34660
>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence Length = 197964 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 122963 aacgaatgaatgaacgaatg 122982
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 66716 aacgaatgaatgaacgaatg 66735
>emb|CR752649.9| Zebrafish DNA sequence from clone DKEY-238J13, complete sequence Length = 164233 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 81546 aacgaatgaatgaacgaatg 81565
>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the gene for a novel protein (FLJ13840), the TAF1A gene for TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa, two novel genes, the gene for C219-reactive peptide (FLJ39207), the 3' of the gene for a novel protein (FLJ12806) and a CpG island, complete sequence Length = 194034 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaat 123 |||||||||||||||||||| Sbjct: 27746 aaacgaatgaatgaacgaat 27765
>gb|AC060231.8| Homo sapiens chromosome 10 clone RP11-435G3, complete sequence Length = 193519 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 46612 aacgaatgaatgaacgaatg 46593
>emb|AL136523.20| Human DNA sequence from clone RP11-103K9 on chromosome 13, complete sequence Length = 86859 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ggaagaaacgaatgaatgaa 118 |||||||||||||||||||| Sbjct: 29578 ggaagaaacgaatgaatgaa 29597
>emb|AL137157.7| Human DNA sequence from clone RP5-1116C7 on chromosome 1q24.1-25.1 Contains part of the DNM3 gene for dynamin 3, complete sequence Length = 109347 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 28640 aacgaatgaatgaacgaatg 28621
>emb|AL133327.10| Human DNA sequence from clone RP11-77F13 on chromosome 10 Contains the 3' end of the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate synthase 2, the 3' end of a novel gene (FLJ90742) and a CpG island, complete sequence Length = 124628 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ttgttgttcatggcaggcct 253 |||||||||||||||||||| Sbjct: 111011 ttgttgttcatggcaggcct 111030
>emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in linkage group 24, complete sequence Length = 161081 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 81358 aacgaatgaatgaacgaatg 81377
>emb|BX530021.7| Zebrafish DNA sequence from clone CH211-117G3 in linkage group 6, complete sequence Length = 168208 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 111257 aacgaatgaatgaacgaatg 111276
>gb|BC044178.1| Danio rerio zgc:55473, mRNA (cDNA clone MGC:55473 IMAGE:2640182), complete cds Length = 1692 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 agcccgtcagggttatctgcgtga 383 |||| ||||||||||||||||||| Sbjct: 664 agccggtcagggttatctgcgtga 687
>emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in linkage group 12, complete sequence Length = 157056 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 aagaaacgaatgaatgaacgaatg 124 |||||||||||||||||| ||||| Sbjct: 102460 aagaaacgaatgaatgaatgaatg 102437
>emb|AL845362.4| Zebrafish DNA sequence from clone CH211-142H2 in linkage group 2 Contains a putative novel gene, a novel gene similar to PTF1 (pancreas transcription factor 1, subunit p48), a novel gene similar to DLGAP1 (discs, large (Drosophila) homolog-associated protein 1) and two CpG islands, complete sequence Length = 161465 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 84798 aacgaatgaatgaacgaatg 84779
>emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in linkage group 17, complete sequence Length = 169728 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ggaagaaacgaatgaatgaacgaa 122 |||||||||||||||| ||||||| Sbjct: 8480 ggaagaaacgaatgaaggaacgaa 8503
>emb|CR626883.8| Zebrafish DNA sequence from clone DKEY-7D23 in linkage group 15, complete sequence Length = 68582 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 60920 aacgaatgaatgaacgaatg 60939
>emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in linkage group 16, complete sequence Length = 250962 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 49144 aacgaatgaatgaacgaatg 49163
>dbj|AB190918.1| Oryza sativa (japonica cultivar-group) osysl8 mRNA for hypothetical protein, complete cds Length = 2085 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cctccggcctcatctgcggc 442 |||||||||||||||||||| Sbjct: 1931 cctccggcctcatctgcggc 1950
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 92422 aacgaatgaatgaacgaatg 92403
>emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 in linkage group 18, complete sequence Length = 172599 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 589 aacgaatgaatgaacgaatg 570
>dbj|AK097798.1| Homo sapiens cDNA FLJ40479 fis, clone TESTI2043282, moderately similar to ZINC FINGER PROTEIN 43 Length = 2091 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctctgcagcatgaattctct 468 |||||||||||||||||||| Sbjct: 887 ctctgcagcatgaattctct 868
>ref|XM_697121.1| PREDICTED: Danio rerio similar to zgc:55473 (LOC554816), mRNA Length = 691 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 agcccgtcagggttatctgcgtga 383 |||| ||||||||||||||||||| Sbjct: 663 agccggtcagggttatctgcgtga 686
>emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in linkage group 2, complete sequence Length = 155396 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aaacgaatgaatgaacgaat 123 |||||||||||||||||||| Sbjct: 42716 aaacgaatgaatgaacgaat 42735
>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence Length = 230610 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 211462 aacgaatgaatgaacgaatg 211481
>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24, complete sequence Length = 167578 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaatgcac 127 ||||||||||||||| |||||||| Sbjct: 59480 aaacgaatgaatgaatgaatgcac 59457
>emb|BX000702.11| Zebrafish DNA sequence from clone CH211-160D19 in linkage group 15, complete sequence Length = 161904 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 10853 aacgaatgaatgaacgaatg 10872
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 cctccggcctcatctgcggc 442 |||||||||||||||||||| Sbjct: 866490 cctccggcctcatctgcggc 866471
>gb|AC073539.3|AC073539 Homo sapiens chromosome 19 clone RP11-157B13, complete sequence Length = 184213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctctgcagcatgaattctct 468 |||||||||||||||||||| Sbjct: 120372 ctctgcagcatgaattctct 120353
>gb|AC132216.7| Homo sapiens chromosome 11, clone RP13-786C16, complete sequence Length = 174373 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 97 atggaagaaacgaatgaatgaacgaatg 124 |||||||||| |||||||||||| |||| Sbjct: 48778 atggaagaaatgaatgaatgaacaaatg 48805
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 cctccggcctcatctgcggc 442 |||||||||||||||||||| Sbjct: 75698 cctccggcctcatctgcggc 75679
>emb|BX537271.3| Zebrafish DNA sequence from clone CH211-261P7 in linkage group 2, complete sequence Length = 169504 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 91817 aacgaatgaatgaacgaatg 91836
>emb|BX470190.5| Zebrafish DNA sequence from clone CH211-237N17 in linkage group 3, complete sequence Length = 150830 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 27118 aacgaatgaatgaacgaatg 27099
>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12, complete sequence Length = 161610 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaacgaatgaatgaacgaat 123 |||||||||||||||||||| Sbjct: 96665 aaacgaatgaatgaacgaat 96646
>emb|AL935324.8| Zebrafish DNA sequence from clone CH211-197B6 in linkage group 10, complete sequence Length = 197730 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 12440 aacgaatgaatgaacgaatg 12421
>dbj|AB015802.1| Gluconacetobacter xylinus cmc, ccp, bcsAI, bcsBI, bcsCI, bcsDI and bgl genes, partial and complete cds Length = 12065 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cagacggtcgctcgcccgcccccgcagt 164 |||||||||| |||||||||||| |||| Sbjct: 1868 cagacggtcggtcgcccgcccccccagt 1841
>dbj|AK072347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D10, full insert sequence Length = 2692 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cctccggcctcatctgcggc 442 |||||||||||||||||||| Sbjct: 2209 cctccggcctcatctgcggc 2228
>emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in linkage group 18, complete sequence Length = 144824 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 48023 aacgaatgaatgaacgaatg 48042
>emb|BX950204.17| Zebrafish DNA sequence from clone DKEY-252P7 in linkage group 18, complete sequence Length = 133263 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 131852 aacgaatgaatgaacgaatg 131833
>emb|CR356233.12| Zebrafish DNA sequence from clone CH211-262N1, complete sequence Length = 146900 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 101976 aacgaatgaatgaacgaatg 101957
>emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in linkage group 20, complete sequence Length = 122662 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 96895 aacgaatgaatgaacgaatg 96876
>emb|BX511210.5| Zebrafish DNA sequence from clone CH211-219I10 in linkage group 20, complete sequence Length = 62936 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 40755 aacgaatgaatgaacgaatg 40736
>emb|CR925738.6| Zebrafish DNA sequence from clone DKEY-164G12 in linkage group 10, complete sequence Length = 155003 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 72661 aacgaatgaatgaacgaatg 72642
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 139473 aacgaatgaatgaacgaatg 139492
>emb|BX296559.14| Zebrafish DNA sequence from clone CH211-285F17 in linkage group 24, complete sequence Length = 171695 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 44780 aacgaatgaatgaacgaatg 44799
>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3, complete sequence Length = 174887 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 109188 aacgaatgaatgaacgaatg 109169
>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence Length = 186487 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 126521 aacgaatgaatgaacgaatg 126502
>emb|BX255880.4| Mouse DNA sequence from clone RP23-302F21 on chromosome 4, complete sequence Length = 33036 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 cttctttcggccttgagaaaatta 521 |||||||| ||||||||||||||| Sbjct: 24777 cttctttcagccttgagaaaatta 24800
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aacgaatgaatgaacgaatg 124 |||||||||||||||||||| Sbjct: 129270 aacgaatgaatgaacgaatg 129289 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,573,226 Number of Sequences: 3902068 Number of extensions: 5573226 Number of successful extensions: 102352 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101861 Number of HSP's gapped (non-prelim): 490 length of query: 668 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 645 effective length of database: 17,143,297,704 effective search space: 11057427019080 effective search space used: 11057427019080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)