ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL713996.11| Zebrafish DNA sequence from clone BUSM1-201C3 i... 46 0.12
2gb|AY157991.1| Mus musculus janus kinase 2 (Jak2) gene, partial cds 44 0.47
3gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, c... 44 0.47
4gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, co... 44 0.47
5gb|AC027544.11| Homo sapiens chromosome 11, clone RP11-613F22, c... 44 0.47
6ref|NM_115260.2| Arabidopsis thaliana unknown protein AT3G54000 ... 42 1.9
7ref|NM_202699.1| Arabidopsis thaliana unknown protein AT3G54000 ... 42 1.9
8ref|NM_202700.1| Arabidopsis thaliana unknown protein AT3G54000 ... 42 1.9
9gb|BC062540.1| Homo sapiens cDNA clone IMAGE:5927934, partial cds 42 1.9
10emb|CR786580.6| Human DNA sequence from clone RP11-764K9 on chro... 42 1.9
11ref|XM_774906.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.9
12emb|AL139421.12| Human DNA sequence from clone RP4-717I23 on chr... 42 1.9
13gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cance... 42 1.9
14gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, comp... 42 1.9
15emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.9
16emb|AL117607.1|HSM801142 Homo sapiens mRNA; cDNA DKFZp564N0763 (... 42 1.9
17emb|BX572627.5| Zebrafish DNA sequence from clone CH211-222M21 i... 42 1.9
18dbj|AK095655.1| Homo sapiens cDNA FLJ38336 fis, clone FCBBF3026678 42 1.9
19gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, comp... 42 1.9
20emb|BX822846.1|CNS0A61K Arabidopsis thaliana Full-length cDNA Co... 42 1.9
21emb|BX822499.1|CNS0A65A Arabidopsis thaliana Full-length cDNA Co... 42 1.9
22emb|BX824491.1|CNS0A5ND Arabidopsis thaliana Full-length cDNA Co... 42 1.9
23emb|BX823020.1|CNS0A4S6 Arabidopsis thaliana Full-length cDNA Co... 42 1.9
24emb|BX823010.1|CNS0A4P8 Arabidopsis thaliana Full-length cDNA Co... 42 1.9
25gb|BT005115.1| Arabidopsis thaliana clone U20622 unknown protein... 42 1.9
26gb|BT003892.1| Arabidopsis thaliana clone RAFL15-12-E22 (R20622)... 42 1.9
27gb|AY084251.1| Arabidopsis thaliana clone 101230 mRNA, complete ... 42 1.9
28gb|BC080605.1| Homo sapiens hypothetical protein LOC203274, mRNA... 42 1.9
29emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on ch... 42 1.9
30gb|BC110369.1| Homo sapiens cDNA clone IMAGE:5498355 42 1.9
31gb|AC091400.4| Pan troglodytes clone RP43-13P21, complete sequence 40 7.3
32gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.3
33ref|XM_515946.1| PREDICTED: Pan troglodytes similar to N2B-Titin... 40 7.3
34gb|AF017104.1| Homo sapiens chromosome 7 common fragile site, co... 40 7.3
35ref|XM_415243.1| PREDICTED: Gallus gallus similar to mKIAA0376 p... 40 7.3
36ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2... 40 7.3
37ref|NM_003319.2| Homo sapiens titin (TTN), transcript variant N2... 40 7.3
38ref|NM_133432.1| Homo sapiens titin (TTN), transcript variant no... 40 7.3
39ref|NM_133437.1| Homo sapiens titin (TTN), transcript variant no... 40 7.3
40gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence 40 7.3
41gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complet... 40 7.3
42gb|AC091504.3| Pan troglodytes clone RP43-13M21, complete sequence 40 7.3
43gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome... 40 7.3
44emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin 40 7.3
45emb|AJ633099.1| Pseudomonas balearica partial nosZ gene for nitr... 40 7.3
46emb|AJ633098.1| Pseudomonas balearica partial nosZ gene for nitr... 40 7.3
47gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequ... 40 7.3
48gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, compl... 40 7.3
49gb|AC004089.25| Homo sapiens Chromosome 7 BAC Clone 155b01, comp... 40 7.3
50gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, comple... 40 7.3
51gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Can... 40 7.3
52gb|AC005015.2|AC005015 Homo sapiens BAC clone GS1-166C5 from 7q1... 40 7.3
53gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, c... 40 7.3
54gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, co... 40 7.3
55emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone h... 40 7.3 
>emb|AL713996.11| Zebrafish DNA sequence from clone BUSM1-201C3 in linkage group 9,
             complete sequence
          Length = 58037

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 127   aaaaagattacagcctacaaaat 149
             |||||||||||||||||||||||
Sbjct: 56760 aaaaagattacagcctacaaaat 56738
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>gb|AY157991.1| Mus musculus janus kinase 2 (Jak2) gene, partial cds
          Length = 10106

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 488  ctcacactaacacacgttgcagctcc 513
            ||||||||||||||||||||| ||||
Sbjct: 2060 ctcacactaacacacgttgcacctcc 2035
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>gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, complete sequence
          Length = 168362

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 488   ctcacactaacacacgttgcagctcc 513
             ||||||||||||||||||||| ||||
Sbjct: 26394 ctcacactaacacacgttgcacctcc 26369
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>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence
          Length = 173042

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 488   ctcacactaacacacgttgcagctcc 513
             ||||||||||||||||||||| ||||
Sbjct: 26696 ctcacactaacacacgttgcacctcc 26721
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>gb|AC027544.11| Homo sapiens chromosome 11, clone RP11-613F22, complete sequence
          Length = 196410

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 20    gttgtaatgtgcagtacaaaaa 41
             ||||||||||||||||||||||
Sbjct: 98421 gttgtaatgtgcagtacaaaaa 98400
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>ref|NM_115260.2| Arabidopsis thaliana unknown protein AT3G54000 transcript variant
            AT3G54000.1 mRNA, complete cds
          Length = 1635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1130 aacccaccattgttgctcctc 1110
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>ref|NM_202699.1| Arabidopsis thaliana unknown protein AT3G54000 transcript variant
            AT3G54000.2 mRNA, complete cds
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1219 aacccaccattgttgctcctc 1199
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>ref|NM_202700.1| Arabidopsis thaliana unknown protein AT3G54000 transcript variant
            AT3G54000.3 mRNA, complete cds
          Length = 1821

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1316 aacccaccattgttgctcctc 1296
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>gb|BC062540.1| Homo sapiens cDNA clone IMAGE:5927934, partial cds
          Length = 2240

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 ctcatctctgcctgccttccc 225
           |||||||||||||||||||||
Sbjct: 223 ctcatctctgcctgccttccc 243
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>emb|CR786580.6| Human DNA sequence from clone RP11-764K9 on chromosome 9 Contains two
              novel pseudogenes, a novel gene, a pseudogene similar to
              part of double homeobox, 4 (DUX4), a FSHD region gene 1
              (FRG1) pseudogene and four CpG islands, complete sequence
          Length = 191980

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 205    ctcatctctgcctgccttccc 225
              |||||||||||||||||||||
Sbjct: 101275 ctcatctctgcctgccttccc 101255
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>ref|XM_774906.1| PREDICTED: Strongylocentrotus purpuratus similar to exosome component
            10 isoform 1 (LOC574590), mRNA
          Length = 2460

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 190  acaatgaagaatgaactcatc 210
            |||||||||||||||||||||
Sbjct: 1063 acaatgaagaatgaactcatc 1083
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>emb|AL139421.12| Human DNA sequence from clone RP4-717I23 on chromosome 1p21.2-22.3
             Contains the 3' end of the NY-SAR-41 gene for sarcoma
             antigen NY-SAR-41, a ribosomal protein L39 (RPL39)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 82367

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   tctgcctgccttcccaccaca 231
             |||||||||||||||||||||
Sbjct: 58429 tctgcctgccttcccaccaca 58409
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>gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186773

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 205   ctcatctctgcctgccttccc 225
             |||||||||||||||||||||
Sbjct: 82835 ctcatctctgcctgccttccc 82855
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>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 205    ctcatctctgcctgccttccc 225
              |||||||||||||||||||||
Sbjct: 164322 ctcatctctgcctgccttccc 164342
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>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20
          Length = 119407

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 395    aacccaccattgttgctcctc 415
              |||||||||||||||||||||
Sbjct: 100627 aacccaccattgttgctcctc 100607
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>emb|AL117607.1|HSM801142 Homo sapiens mRNA; cDNA DKFZp564N0763 (from clone DKFZp564N0763)
          Length = 3740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 205  ctcatctctgcctgccttccc 225
            |||||||||||||||||||||
Sbjct: 1675 ctcatctctgcctgccttccc 1695
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>emb|BX572627.5| Zebrafish DNA sequence from clone CH211-222M21 in linkage group 9,
              complete sequence
          Length = 209758

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     tgtaatgtgcagtacaaaaat 42
              |||||||||||||||||||||
Sbjct: 161961 tgtaatgtgcagtacaaaaat 161941
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>dbj|AK095655.1| Homo sapiens cDNA FLJ38336 fis, clone FCBBF3026678
          Length = 3030

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 205  ctcatctctgcctgccttccc 225
            |||||||||||||||||||||
Sbjct: 1276 ctcatctctgcctgccttccc 1296
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>gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, complete sequence
          Length = 189610

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 205 ctcatctctgcctgccttccc 225
           |||||||||||||||||||||
Sbjct: 385 ctcatctctgcctgccttccc 365
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>emb|BX822846.1|CNS0A61K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB68ZD12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1465

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1100 aacccaccattgttgctcctc 1080
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>emb|BX822499.1|CNS0A65A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB41ZH09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1512

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1022 aacccaccattgttgctcctc 1002
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>emb|BX824491.1|CNS0A5ND Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH51ZF03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1728

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1314 aacccaccattgttgctcctc 1294
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>emb|BX823020.1|CNS0A4S6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB81ZB08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1589

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1110 aacccaccattgttgctcctc 1090
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>emb|BX823010.1|CNS0A4P8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB80ZA11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1175 aacccaccattgttgctcctc 1155
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>gb|BT005115.1| Arabidopsis thaliana clone U20622 unknown protein (At3g54000) mRNA,
           complete cds
          Length = 1090

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 395 aacccaccattgttgctcctc 415
           |||||||||||||||||||||
Sbjct: 980 aacccaccattgttgctcctc 960
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>gb|BT003892.1| Arabidopsis thaliana clone RAFL15-12-E22 (R20622) unknown protein
            (At3g54000) mRNA, complete cds
          Length = 1647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1121 aacccaccattgttgctcctc 1101
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>gb|AY084251.1| Arabidopsis thaliana clone 101230 mRNA, complete sequence
          Length = 1607

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  aacccaccattgttgctcctc 415
            |||||||||||||||||||||
Sbjct: 1121 aacccaccattgttgctcctc 1101
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>gb|BC080605.1| Homo sapiens hypothetical protein LOC203274, mRNA (cDNA clone
            IMAGE:5458709)
          Length = 2758

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 205  ctcatctctgcctgccttccc 225
            |||||||||||||||||||||
Sbjct: 1065 ctcatctctgcctgccttccc 1085
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>emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on chromosome 22, complete
             sequence
          Length = 186861

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 205   ctcatctctgcctgccttccc 225
             |||||||||||||||||||||
Sbjct: 82909 ctcatctctgcctgccttccc 82929
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>gb|BC110369.1| Homo sapiens cDNA clone IMAGE:5498355
          Length = 4224

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 205  ctcatctctgcctgccttccc 225
            |||||||||||||||||||||
Sbjct: 2370 ctcatctctgcctgccttccc 2390
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>gb|AC091400.4| Pan troglodytes clone RP43-13P21, complete sequence
          Length = 89312

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctctgcctgccttcccacca 229
             ||||||||||||||||||||
Sbjct: 84115 ctctgcctgccttcccacca 84096
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>gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OABb-208A1, complete
              sequence
          Length = 145600

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gtgcagtacaaaaataagca 47
              ||||||||||||||||||||
Sbjct: 109593 gtgcagtacaaaaataagca 109612
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>ref|XM_515946.1| PREDICTED: Pan troglodytes similar to N2B-Titin Isoform (LOC459783),
            mRNA
          Length = 30982

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 188  taacaatgaagaatgaactcatctctgc 215
            |||||||||||||||| | |||||||||
Sbjct: 4005 taacaatgaagaatgatcacatctctgc 4032
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>gb|AF017104.1| Homo sapiens chromosome 7 common fragile site, complete sequence
          Length = 161155

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   tgaactcatctctgcctgccttcc 224
             |||||||||||||||||| |||||
Sbjct: 33655 tgaactcatctctgcctgacttcc 33632
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>ref|XM_415243.1| PREDICTED: Gallus gallus similar to mKIAA0376 protein (LOC416950),
           mRNA
          Length = 3662

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 214 gcctgccttcccaccacaaactgc 237
           |||| |||||||||||||||||||
Sbjct: 63  gccttccttcccaccacaaactgc 40
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>ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2-A, mRNA
          Length = 101518

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 43521 taacaatgaagaatgatcacatctctgc 43548
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>ref|NM_003319.2| Homo sapiens titin (TTN), transcript variant N2-B, mRNA
          Length = 82027

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 24030 taacaatgaagaatgatcacatctctgc 24057
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>ref|NM_133432.1| Homo sapiens titin (TTN), transcript variant novex-1, mRNA
          Length = 82402

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 24405 taacaatgaagaatgatcacatctctgc 24432
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>ref|NM_133437.1| Homo sapiens titin (TTN), transcript variant novex-2, mRNA
          Length = 82603

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 24606 taacaatgaagaatgatcacatctctgc 24633
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>gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence
          Length = 154295

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctctgcctgccttcccacca 229
             ||||||||||||||||||||
Sbjct: 87952 ctctgcctgccttcccacca 87933
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>gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complete sequence
          Length = 180290

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ctctgcctgccttcccacca 229
             ||||||||||||||||||||
Sbjct: 56434 ctctgcctgccttcccacca 56453
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>gb|AC091504.3| Pan troglodytes clone RP43-13M21, complete sequence
          Length = 139130

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctctgcctgccttcccacca 229
            ||||||||||||||||||||
Sbjct: 4742 ctctgcctgccttcccacca 4723
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>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence
          Length = 184288

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aacaatgaagaatgaactca 208
             ||||||||||||||||||||
Sbjct: 58613 aacaatgaagaatgaactca 58632
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>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 188    taacaatgaagaatgaactcatctctgc 215
              |||||||||||||||| | |||||||||
Sbjct: 209350 taacaatgaagaatgatcacatctctgc 209377
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>emb|AJ633099.1| Pseudomonas balearica partial nosZ gene for nitrous-oxide
           reductase, isolate LS401
          Length = 453

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 aacctgaccgccgacaacaa 442
           ||||||||||||||||||||
Sbjct: 169 aacctgaccgccgacaacaa 188
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>emb|AJ633098.1| Pseudomonas balearica partial nosZ gene for nitrous-oxide
           reductase, strain SP1402
          Length = 453

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 aacctgaccgccgacaacaa 442
           ||||||||||||||||||||
Sbjct: 169 aacctgaccgccgacaacaa 188
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>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence
          Length = 175281

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    tgttgctcctcgtctatgaacctg 428
              |||||||||||| |||||||||||
Sbjct: 104939 tgttgctcctcggctatgaacctg 104916
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>gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, complete sequence
          Length = 155663

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    tggatatatactactactac 113
             ||||||||||||||||||||
Sbjct: 97827 tggatatatactactactac 97846
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>gb|AC004089.25| Homo sapiens Chromosome 7 BAC Clone 155b01, complete sequence
          Length = 130855

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctctgcctgccttcccacca 229
             ||||||||||||||||||||
Sbjct: 29929 ctctgcctgccttcccacca 29910
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>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 45088 taacaatgaagaatgatcacatctctgc 45061
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>gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 135039

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    tggatatatactactactac 113
             ||||||||||||||||||||
Sbjct: 57053 tggatatatactactactac 57072
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>gb|AC005015.2|AC005015 Homo sapiens BAC clone GS1-166C5 from 7q11.23-q21.1, complete sequence
          Length = 219935

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ctctgcctgccttcccacca 229
              ||||||||||||||||||||
Sbjct: 190015 ctctgcctgccttcccacca 190034
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>gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, complete sequence
          Length = 192768

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    tgaactcatctctgcctgccttcc 224
              |||||||||||||||||| |||||
Sbjct: 111855 tgaactcatctctgcctgacttcc 111832
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>gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, complete sequence
          Length = 205473

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    tctctgcctgccttcccacc 228
              ||||||||||||||||||||
Sbjct: 138088 tctctgcctgccttcccacc 138107
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>emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone hh1-hh54)
          Length = 81940

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 188   taacaatgaagaatgaactcatctctgc 215
             |||||||||||||||| | |||||||||
Sbjct: 23939 taacaatgaagaatgatcacatctctgc 23966


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,505,021
Number of Sequences: 3902068
Number of extensions: 4505021
Number of successful extensions: 79048
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78979
Number of HSP's gapped (non-prelim): 69
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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